cdmlib.git
11 years agofix handling of iso639_2 (add vocabulary check)
Andreas Müller [Wed, 19 Jun 2013 16:26:19 +0000 (16:26 +0000)]
fix handling of iso639_2 (add vocabulary check)

11 years agoremove commented code
Andreas Müller [Wed, 19 Jun 2013 16:07:54 +0000 (16:07 +0000)]
remove commented code

11 years agoremove deprecate constructor call in TestingTermInitializer
Andreas Müller [Wed, 19 Jun 2013 16:05:32 +0000 (16:05 +0000)]
remove deprecate constructor call in TestingTermInitializer

11 years agoadd UTF8 enum and use it in DerivedUnitFacade
Andreas Müller [Wed, 19 Jun 2013 15:49:11 +0000 (15:49 +0000)]
add UTF8 enum and use it in DerivedUnitFacade

11 years agoadapt PropertyEditorSupport to new missing TdwgArea class (see also #3520)
Andreas Müller [Wed, 19 Jun 2013 15:33:33 +0000 (15:33 +0000)]
adapt PropertyEditorSupport to new missing TdwgArea class (see also #3520)

11 years agoremove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)...
Andreas Müller [Wed, 19 Jun 2013 15:27:55 +0000 (15:27 +0000)]
remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in io   (There is an open issue in CdmImporterTest)

11 years agoremove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)...
Andreas Müller [Wed, 19 Jun 2013 15:25:11 +0000 (15:25 +0000)]
remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in ext

11 years agoremove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)...
Andreas Müller [Wed, 19 Jun 2013 15:23:27 +0000 (15:23 +0000)]
remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in services

11 years agoremove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)...
Andreas Müller [Wed, 19 Jun 2013 15:18:24 +0000 (15:18 +0000)]
remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539) in persistence

11 years agoremove import
Andreas Müller [Wed, 19 Jun 2013 15:10:58 +0000 (15:10 +0000)]
remove import

11 years agoremove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)
Andreas Müller [Wed, 19 Jun 2013 14:34:24 +0000 (14:34 +0000)]
remove TdwgArea and add termType and idInVocabulary (#2998, #3478, #3479, #3539)

11 years agoremove TDWGArea in commons
Andreas Müller [Wed, 19 Jun 2013 14:19:01 +0000 (14:19 +0000)]
remove TDWGArea in commons

11 years agoremove unnecessary datasource.xml (2)
Andreas Müller [Wed, 19 Jun 2013 13:03:33 +0000 (13:03 +0000)]
remove unnecessary datasource.xml (2)

11 years agoremove unnecessary datasource.xml
Andreas Müller [Wed, 19 Jun 2013 13:02:23 +0000 (13:02 +0000)]
remove unnecessary datasource.xml

11 years agominor renaming
Andreas Müller [Wed, 19 Jun 2013 12:24:39 +0000 (12:24 +0000)]
minor renaming

11 years agominor
Andreas Müller [Tue, 18 Jun 2013 17:04:18 +0000 (17:04 +0000)]
minor

11 years agoadded term type to test terms
Andreas Müller [Thu, 13 Jun 2013 10:51:03 +0000 (10:51 +0000)]
added term type to test terms

11 years agoadded TermType enum
Andreas Müller [Tue, 11 Jun 2013 17:45:41 +0000 (17:45 +0000)]
added TermType enum

11 years agoupdate updated script and some other changes
Andreas Müller [Tue, 11 Jun 2013 16:37:25 +0000 (16:37 +0000)]
update updated script and some other changes

11 years agofix derived unit cache strategy text for elevation
Andreas Müller [Mon, 10 Jun 2013 22:03:05 +0000 (22:03 +0000)]
fix derived unit cache strategy text for elevation

11 years agoimprove derived unit facade tests for absolute elevation and bugfix method name
Andreas Müller [Mon, 10 Jun 2013 21:52:50 +0000 (21:52 +0000)]
improve derived unit facade tests for absolute elevation and bugfix method name

11 years agochanges for absoluteElevation #2663, treeIndex (TaxonNode) #2947 and source type...
Andreas Müller [Fri, 7 Jun 2013 11:13:45 +0000 (11:13 +0000)]
changes for absoluteElevation #2663, treeIndex (TaxonNode) #2947 and source type #1549

11 years agofix bugs and adapt tests for original source type
Andreas Müller [Thu, 6 Jun 2013 23:15:39 +0000 (23:15 +0000)]
fix bugs and adapt tests for original source type

11 years agoadd original source type #1549
Andreas Müller [Thu, 6 Jun 2013 15:08:24 +0000 (15:08 +0000)]
add original source type #1549

11 years agoupdate factory methods for original sources #1549
Andreas Müller [Thu, 6 Jun 2013 14:17:01 +0000 (14:17 +0000)]
update factory methods for original sources #1549

11 years agoMerge trunk into CDM 3.3
Andreas Müller [Thu, 6 Jun 2013 11:52:36 +0000 (11:52 +0000)]
Merge trunk into CDM 3.3

11 years agoadd original source type #1549 and adding taxon node tree index
Andreas Müller [Thu, 6 Jun 2013 11:43:56 +0000 (11:43 +0000)]
add original source type #1549 and adding taxon node tree index

11 years agonumber nomenclatural codes
Andreas Müller [Wed, 5 Jun 2013 23:39:59 +0000 (23:39 +0000)]
number nomenclatural codes

11 years agochange ICBN to ICNAFP #2864
Andreas Müller [Wed, 5 Jun 2013 23:34:33 +0000 (23:34 +0000)]
change ICBN to ICNAFP #2864

11 years agochange ICBN to ICNAFP #2864
Andreas Müller [Wed, 5 Jun 2013 23:33:52 +0000 (23:33 +0000)]
change ICBN to ICNAFP #2864

11 years agoimplemented attribute and enum
Andreas Müller [Wed, 15 May 2013 09:25:34 +0000 (09:25 +0000)]
implemented attribute and enum

11 years agocdmlib version for io
Andreas Müller [Wed, 15 May 2013 08:12:16 +0000 (08:12 +0000)]
cdmlib version for io

11 years agoadd updater for cdm 3.3
Andreas Müller [Wed, 15 May 2013 08:11:16 +0000 (08:11 +0000)]
add updater for cdm 3.3

11 years agomerged trunk to cdm-3.3
Andreas Müller [Mon, 6 May 2013 17:33:20 +0000 (17:33 +0000)]
merged trunk to cdm-3.3

11 years agoreducing batch size, reducing max memory consumption, batch processes now running...
Andreas Kohlbecker [Mon, 6 May 2013 16:11:34 +0000 (16:11 +0000)]
reducing batch size, reducing max memory consumption, batch processes now running with lower priority (=3)

11 years agoalways updating priorities in transmission engine (avoids errors due to missing prior...
Andreas Kohlbecker [Mon, 6 May 2013 16:11:33 +0000 (16:11 +0000)]
always updating priorities in transmission engine (avoids errors due to missing priorities)

11 years agojava doc added
Andreas Kohlbecker [Mon, 6 May 2013 16:11:32 +0000 (16:11 +0000)]
java doc added

11 years agobetter error reporting
Andreas Kohlbecker [Mon, 6 May 2013 15:35:57 +0000 (15:35 +0000)]
better error reporting

11 years agoremoving indetion after mediawiki import
s.buers [Mon, 6 May 2013 12:41:55 +0000 (12:41 +0000)]
removing indetion after mediawiki import

11 years agoit now works without automatic indention
s.buers [Mon, 6 May 2013 12:28:30 +0000 (12:28 +0000)]
it now works without automatic indention

11 years agoreverted batch size back to 100
Cherian Mathew [Fri, 3 May 2013 09:19:24 +0000 (09:19 +0000)]
reverted batch size back to 100

11 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Thu, 2 May 2013 12:20:06 +0000 (12:20 +0000)]
[maven-release-plugin] prepare for next development iteration

11 years ago[maven-release-plugin] prepare release cdmlib-parent-3.2.0
edit-jenkins [Thu, 2 May 2013 12:20:02 +0000 (12:20 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.2.0

11 years agocreated markup nomenclaturalImport and specimen import
Andreas Müller [Tue, 30 Apr 2013 23:05:30 +0000 (23:05 +0000)]
created markup nomenclaturalImport and specimen import

11 years agoupdates to the markup import
Andreas Müller [Tue, 30 Apr 2013 17:07:21 +0000 (17:07 +0000)]
updates to the markup import

11 years agochanged some template names
s.buers [Tue, 30 Apr 2013 15:49:47 +0000 (15:49 +0000)]
changed some template names

11 years agolatest markup updates
Andreas Müller [Tue, 30 Apr 2013 15:14:02 +0000 (15:14 +0000)]
latest markup updates

11 years agoremoved unused imports
Cherian Mathew [Tue, 30 Apr 2013 14:15:18 +0000 (14:15 +0000)]
removed unused imports

11 years agochanged all parameter names to lower case
s.buers [Tue, 30 Apr 2013 12:34:48 +0000 (12:34 +0000)]
changed all parameter names to lower case

11 years agocorrected examples
Cherian Mathew [Tue, 30 Apr 2013 12:26:33 +0000 (12:26 +0000)]
corrected examples

11 years agoNameCatalogueController : added endpoints for documentation
Cherian Mathew [Tue, 30 Apr 2013 11:22:57 +0000 (11:22 +0000)]
NameCatalogueController : added endpoints for documentation
name-catalogue-accepted.apt : added type parameter to doc

11 years agoTransmissionEngineDistribution separating byArea and byRank aggregation - correcting...
Andreas Kohlbecker [Tue, 30 Apr 2013 10:02:42 +0000 (10:02 +0000)]
TransmissionEngineDistribution separating byArea and byRank aggregation - correcting progressmonitor work ticks

11 years agoTransmissionEngineDistribution separating byArea and byRank aggregation
Andreas Kohlbecker [Tue, 30 Apr 2013 09:58:50 +0000 (09:58 +0000)]
TransmissionEngineDistribution separating byArea and byRank aggregation

11 years agoremoving test code
Andreas Kohlbecker [Tue, 30 Apr 2013 09:58:43 +0000 (09:58 +0000)]
removing test code

11 years agocorrected utl to new endpoints
Cherian Mathew [Tue, 30 Apr 2013 09:27:27 +0000 (09:27 +0000)]
corrected utl to new endpoints

11 years agoMarkup import updates
Andreas Müller [Mon, 29 Apr 2013 23:08:59 +0000 (23:08 +0000)]
Markup import updates

11 years agominor
Andreas Müller [Mon, 29 Apr 2013 21:45:55 +0000 (21:45 +0000)]
minor

11 years agofixed gallery problem
s.buers [Mon, 29 Apr 2013 09:38:23 +0000 (09:38 +0000)]
fixed gallery problem

11 years agothis file is imported in the multipage it provides some string parsing
s.buers [Mon, 29 Apr 2013 09:29:40 +0000 (09:29 +0000)]
this file is imported in the multipage it provides some string parsing
functions

11 years agoNew factory method for keyStatement
Andreas Müller [Sat, 27 Apr 2013 00:45:35 +0000 (00:45 +0000)]
New factory method for keyStatement

11 years agotoString() for KeyStatement
Andreas Müller [Sat, 27 Apr 2013 00:34:34 +0000 (00:34 +0000)]
toString() for KeyStatement

11 years agodocumentation on polytomous key + node
Andreas Müller [Sat, 27 Apr 2013 00:10:53 +0000 (00:10 +0000)]
documentation on polytomous key + node

11 years agoupdating documentation for PolytomousKeyNode
Andreas Müller [Fri, 26 Apr 2013 23:58:02 +0000 (23:58 +0000)]
updating documentation for PolytomousKeyNode

11 years agolucene search: fixing grouping problem and basic indexing of term hierachies
Andreas Kohlbecker [Fri, 26 Apr 2013 21:18:42 +0000 (21:18 +0000)]
lucene search: fixing grouping problem and basic indexing of term hierachies

11 years agoreenabling some lines of code
Andreas Kohlbecker [Fri, 26 Apr 2013 15:34:58 +0000 (15:34 +0000)]
reenabling some lines of code

11 years agofirst working implementation of the Occurrence freetext search with spatial search
Andreas Kohlbecker [Fri, 26 Apr 2013 15:34:55 +0000 (15:34 +0000)]
first working implementation of the Occurrence freetext search with spatial search

11 years agousing NumericField and spatial type for search field
Andreas Kohlbecker [Fri, 26 Apr 2013 15:29:08 +0000 (15:29 +0000)]
using NumericField and spatial type for search field

11 years agoname-catalogue-accepted : added apt doc for accepted name search endpoint
Cherian Mathew [Fri, 26 Apr 2013 15:20:14 +0000 (15:20 +0000)]
name-catalogue-accepted : added apt doc for accepted name search endpoint
name-catalogue-fuzzy : added apt doc for fuzzy name search endpoint
name-catalogue-taxon : updated apt doc with source and taxonomic scrutiny info
rest-api-name-catalogue : added links to newly created apt docs

11 years agoadded boundary check on accuracy
Cherian Mathew [Fri, 26 Apr 2013 15:18:09 +0000 (15:18 +0000)]
added boundary check on accuracy

11 years agoAdded template for creating Reference list from citation nodes and nomenclaturalRefer...
l.morris [Thu, 25 Apr 2013 16:23:46 +0000 (16:23 +0000)]
Added template for creating Reference list from citation nodes and nomenclaturalReference nodes.

11 years agoNameCatalogueController : added 'fuzzy' endpoint to perform fuzzy matching on names
Cherian Mathew [Thu, 25 Apr 2013 15:07:47 +0000 (15:07 +0000)]
NameCatalogueController : added 'fuzzy' endpoint to perform fuzzy matching on names
NameSearch : updated NameSearch dto to include similarity score

11 years agoadded NONVIRALNAME to enum for fuzzy search
Cherian Mathew [Thu, 25 Apr 2013 15:06:30 +0000 (15:06 +0000)]
added NONVIRALNAME to enum for fuzzy search

11 years agoINameService : added findByNameFuzzySearch method to search names by fuzzy matching
Cherian Mathew [Thu, 25 Apr 2013 15:05:29 +0000 (15:05 +0000)]
INameService : added findByNameFuzzySearch method to search names by fuzzy matching
NameServiceImpl : implemented findByNameFuzzySearch and helper methods
LuceneSearch : added new simple (TopDocs based) executeSearch method
ISearchResultBuilder : added createResultSet method for generating a result set for TopDocs
SearchResultBuilder : implmented createResultSet method

11 years agoAdded 'redict' endpoint to recreate dictionaries
Cherian Mathew [Thu, 25 Apr 2013 14:54:25 +0000 (14:54 +0000)]
Added 'redict' endpoint to recreate dictionaries

11 years agoAdded Creation of dictionaries within the mass indexer
Cherian Mathew [Thu, 25 Apr 2013 14:53:48 +0000 (14:53 +0000)]
Added Creation of dictionaries within the mass indexer

11 years agominor
Andreas Kohlbecker [Thu, 25 Apr 2013 10:18:49 +0000 (10:18 +0000)]
minor

11 years agomake sessionFactory private
Andreas Müller [Thu, 25 Apr 2013 00:07:11 +0000 (00:07 +0000)]
make sessionFactory private

11 years agominor
Andreas Müller [Thu, 25 Apr 2013 00:04:40 +0000 (00:04 +0000)]
minor

11 years agominor
Andreas Müller [Wed, 24 Apr 2013 23:28:28 +0000 (23:28 +0000)]
minor

11 years agoalso preferring computed distributions in getOrderedDistributions()
Andreas Kohlbecker [Wed, 24 Apr 2013 15:56:49 +0000 (15:56 +0000)]
also preferring computed distributions in getOrderedDistributions()

11 years agofixed the 'italic problem
s.buers [Wed, 24 Apr 2013 14:45:19 +0000 (14:45 +0000)]
fixed the 'italic problem

11 years agoupdate ReferenceFactory method
Andreas Müller [Wed, 24 Apr 2013 13:39:44 +0000 (13:39 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Wed, 24 Apr 2013 13:29:53 +0000 (13:29 +0000)]
update ReferenceFactory method

11 years agominor
Andreas Müller [Wed, 24 Apr 2013 12:40:24 +0000 (12:40 +0000)]
minor

11 years agoremove imports
Andreas Müller [Wed, 24 Apr 2013 12:38:13 +0000 (12:38 +0000)]
remove imports

11 years agogallery works with gallery parser function, but there could be some improvements...
s.buers [Wed, 24 Apr 2013 11:43:51 +0000 (11:43 +0000)]
gallery works with gallery parser function, but there could be some improvements, also i found the replacement of the italic tag seems not to work proper

11 years agoavoid duplicates in derived unit media list
Andreas Müller [Wed, 24 Apr 2013 11:42:26 +0000 (11:42 +0000)]
avoid duplicates in derived unit media list

11 years agochange method name
Andreas Müller [Wed, 24 Apr 2013 11:40:00 +0000 (11:40 +0000)]
change method name

11 years agominor
Andreas Müller [Wed, 24 Apr 2013 11:37:27 +0000 (11:37 +0000)]
minor

11 years agoadding missing logger
Andreas Kohlbecker [Wed, 24 Apr 2013 10:30:17 +0000 (10:30 +0000)]
adding missing logger

11 years agoupdate ReferenceFactory method, remove instantiation
Andreas Müller [Tue, 23 Apr 2013 14:47:59 +0000 (14:47 +0000)]
update ReferenceFactory method, remove instantiation

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:44:56 +0000 (14:44 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:43:37 +0000 (14:43 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:42:18 +0000 (14:42 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:37:16 +0000 (14:37 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:36:46 +0000 (14:36 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:36:02 +0000 (14:36 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:34:29 +0000 (14:34 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:31:19 +0000 (14:31 +0000)]
update ReferenceFactory method

11 years agoupdate ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:27:53 +0000 (14:27 +0000)]
update ReferenceFactory method