Andreas Müller [Thu, 13 Jul 2023 08:03:06 +0000 (10:03 +0200)]
ref #10324 add endemism handling for Cdm2CdmImport
Andreas Müller [Thu, 13 Jul 2023 07:57:19 +0000 (09:57 +0200)]
minor
Andreas Müller [Thu, 13 Jul 2023 07:56:57 +0000 (09:56 +0200)]
cleanup and add TaxonName handling to NonReferencedObjectsDeleter
Andreas Müller [Thu, 13 Jul 2023 07:54:54 +0000 (09:54 +0200)]
cleanup and add explanations for dummies in cdmlight
Katja Luther [Wed, 12 Jul 2023 16:24:25 +0000 (18:24 +0200)]
avoid NPE
Katja Luther [Tue, 11 Jul 2023 07:58:51 +0000 (09:58 +0200)]
ref #10362: adapt dtos and service to new no data status
Katja Luther [Tue, 11 Jul 2023 07:57:33 +0000 (09:57 +0200)]
ref #10362: add noDataStatus to dto
Andreas Müller [Sat, 8 Jul 2023 10:33:01 +0000 (12:33 +0200)]
ref #10324 fix namedArea fetching in import base
Andreas Müller [Fri, 7 Jul 2023 11:28:21 +0000 (13:28 +0200)]
revert ref #10322 make sourceDto.label a simple attribute, not a list
Andreas Müller [Fri, 7 Jul 2023 10:34:29 +0000 (12:34 +0200)]
ref #10368 allow excluding factual data from cdmlight export
Andreas Müller [Fri, 7 Jul 2023 10:17:10 +0000 (12:17 +0200)]
ref #10322 make sourceDto.label a simple attribute, not a list
Andreas Müller [Fri, 7 Jul 2023 10:15:45 +0000 (12:15 +0200)]
cleanup
Andreas Müller [Fri, 7 Jul 2023 09:24:26 +0000 (11:24 +0200)]
ref #10367 add citationMicroReference to description of sources in ReferencingObjectsView
Andreas Müller [Fri, 7 Jul 2023 08:59:47 +0000 (10:59 +0200)]
ref #10322 fix NPE in concept relation loading
Andreas Müller [Wed, 5 Jul 2023 22:10:20 +0000 (00:10 +0200)]
ref #2975 update testH2 in cdmlib
Andreas Müller [Wed, 5 Jul 2023 21:57:30 +0000 (23:57 +0200)]
ref #2975 add noDataStatus to descriptive data (cont. 2)
Andreas Müller [Wed, 5 Jul 2023 21:54:03 +0000 (23:54 +0200)]
ref #2975 add noDataStatus to descriptive data (cont.)
Andreas Müller [Wed, 5 Jul 2023 21:39:00 +0000 (23:39 +0200)]
ref #10322 handle sec- and relSource in taxon relations
Andreas Müller [Wed, 5 Jul 2023 21:37:29 +0000 (23:37 +0200)]
cleanup
Andreas Müller [Wed, 5 Jul 2023 21:30:56 +0000 (23:30 +0200)]
minor
Andreas Müller [Tue, 27 Jun 2023 09:41:28 +0000 (11:41 +0200)]
ref #2975 add noDataStatus to descriptive data
Andreas Müller [Wed, 5 Jul 2023 11:14:22 +0000 (13:14 +0200)]
ref #10178 some cleanup for name matching (cont.)
Andreas Müller [Tue, 4 Jul 2023 16:53:22 +0000 (18:53 +0200)]
ref #10178 some cleanup for name matching (not finished yet)
Andreas Müller [Mon, 3 Jul 2023 15:31:59 +0000 (17:31 +0200)]
ref #10322 fix exception in PortalDtoLoader due to namedArea.includes proxies (cont.)
Andreas Müller [Mon, 3 Jul 2023 14:56:30 +0000 (16:56 +0200)]
cleanup
Andreas Müller [Mon, 3 Jul 2023 14:55:42 +0000 (16:55 +0200)]
ref #10322 fix exception in PortalDtoLoader due to namedArea.includes proxies
Katja Luther [Mon, 3 Jul 2023 12:52:50 +0000 (14:52 +0200)]
fix termDto selects
Katja Luther [Mon, 3 Jul 2023 12:27:28 +0000 (14:27 +0200)]
clean up dto methods
Andreas Müller [Mon, 3 Jul 2023 08:06:30 +0000 (10:06 +0200)]
comment test that should not yet be committed
Andreas Müller [Mon, 3 Jul 2023 06:39:36 +0000 (08:39 +0200)]
fix compile error and cleanup
Andreas Müller [Mon, 3 Jul 2023 06:30:29 +0000 (08:30 +0200)]
remove unused method and cleanup
Andreas Müller [Sun, 2 Jul 2023 10:44:37 +0000 (12:44 +0200)]
ref #10324 adaptations to Cdm2CdmImport for Caucasus exports
Andreas Müller [Sun, 2 Jul 2023 10:36:18 +0000 (12:36 +0200)]
cleanup
Katja Luther [Fri, 30 Jun 2023 09:19:27 +0000 (11:19 +0200)]
ref #10364: add state modifiers to dto
Katja Luther [Thu, 29 Jun 2023 12:02:58 +0000 (14:02 +0200)]
ref #10365: use getTermcollectionDto
Katja Luther [Thu, 29 Jun 2023 11:34:29 +0000 (13:34 +0200)]
ref #10365: adapt termDtos to use trees similar to vocabularies in
editor
Katja Luther [Tue, 27 Jun 2023 11:21:16 +0000 (13:21 +0200)]
ref #10335: adapt character node dto
Katja Luther [Tue, 27 Jun 2023 10:28:57 +0000 (12:28 +0200)]
ref #10361: add null check to avoid NPE
Andreas Müller [Tue, 27 Jun 2023 09:26:18 +0000 (11:26 +0200)]
cleanup
Katja Luther [Mon, 26 Jun 2023 16:11:03 +0000 (18:11 +0200)]
ref #10335: saving termnode changes need call of saveOrUpdate
Katja Luther [Mon, 26 Jun 2023 12:19:19 +0000 (14:19 +0200)]
ref #10361: add isManaged to termbase dtos
Andreas Müller [Mon, 26 Jun 2023 09:16:23 +0000 (11:16 +0200)]
ref #10361 add isManaged to managed terms
Andreas Müller [Mon, 26 Jun 2023 09:05:12 +0000 (11:05 +0200)]
cleanup
Andreas Müller [Mon, 26 Jun 2023 09:04:21 +0000 (11:04 +0200)]
ref #9771 fix Character.propertey and .ratioToStructure handling
Katja Luther [Fri, 23 Jun 2023 15:09:20 +0000 (17:09 +0200)]
ref #10318: add missing base class
Katja Luther [Fri, 23 Jun 2023 14:39:39 +0000 (16:39 +0200)]
ref #10318: code cleaning and add updated informations to dtos
Andreas Müller [Fri, 23 Jun 2023 10:52:40 +0000 (12:52 +0200)]
fix #10358 disable supportsTextData for Characters
Katja Luther [Fri, 23 Jun 2023 09:55:49 +0000 (11:55 +0200)]
ref #10318: add created and createdBy to Dtos
Andreas Müller [Thu, 22 Jun 2023 21:26:44 +0000 (23:26 +0200)]
ref #9771 add delete option for created and updated
Andreas Müller [Thu, 22 Jun 2023 21:25:45 +0000 (23:25 +0200)]
ref #9771 add handling for externally managed
Katja Luther [Thu, 22 Jun 2023 11:51:07 +0000 (13:51 +0200)]
ref #10357: check whether synonym belongs to the actual accepted taxon
Andreas Müller [Wed, 21 Jun 2023 20:41:52 +0000 (22:41 +0200)]
ref #10322 add originalInfo to sourceDto
Katja Luther [Wed, 21 Jun 2023 11:56:02 +0000 (13:56 +0200)]
code cleaning
Katja Luther [Wed, 21 Jun 2023 11:22:23 +0000 (13:22 +0200)]
code cleaning
Andreas Müller [Wed, 21 Jun 2023 08:07:18 +0000 (10:07 +0200)]
ref #9771 handle incomplete vocabularies during graph import
Andreas Müller [Wed, 21 Jun 2023 07:42:13 +0000 (09:42 +0200)]
ref #9771 add Character handling (cont.)
Andreas Müller [Tue, 20 Jun 2023 18:34:43 +0000 (20:34 +0200)]
cleanup
Andreas Müller [Tue, 20 Jun 2023 18:34:20 +0000 (20:34 +0200)]
ref #9771 add Character handling
Andreas Müller [Tue, 20 Jun 2023 17:09:41 +0000 (19:09 +0200)]
ref #10322 add referenceUuid to SourceDto
Andreas Müller [Tue, 20 Jun 2023 14:36:15 +0000 (16:36 +0200)]
ref #9771 remove flush for saveAll and saveOrUpdateAll
Andreas Müller [Tue, 20 Jun 2023 14:35:24 +0000 (16:35 +0200)]
ref #9771, ref #10133 add state term lists to ontology vocabulary
Andreas Müller [Tue, 20 Jun 2023 14:34:16 +0000 (16:34 +0200)]
ref #10320, ref #9771 fixes for Cdm2CdmImportBase
Andreas Müller [Tue, 20 Jun 2023 13:44:19 +0000 (15:44 +0200)]
cleanup
Andreas Müller [Mon, 19 Jun 2023 13:51:53 +0000 (15:51 +0200)]
Revert "Revert "ref #10322 by default use distribution treeDto""
This reverts commit
9d0e7f1b638ba62b1d89a803f53881651b4fa888.
Belen Escobari [Mon, 19 Jun 2023 12:55:13 +0000 (14:55 +0200)]
ref #10178: query only genus, returns all species
Belen Escobari [Mon, 19 Jun 2023 09:24:18 +0000 (11:24 +0200)]
ref #10178: Tests "not exact matches"
Belen Escobari [Mon, 19 Jun 2023 08:23:07 +0000 (10:23 +0200)]
ref #10178: fuzzy name searching without Authors
Katja Luther [Thu, 15 Jun 2023 08:48:52 +0000 (10:48 +0200)]
after reverting the last commit, add the actual changes again.
Katja Luther [Thu, 15 Jun 2023 08:44:32 +0000 (10:44 +0200)]
Revert "remove unreachable code"
This reverts commit
e173c7df9be281cf0ae131161e83587f7a3d0132.
jenkins [Wed, 14 Jun 2023 15:24:35 +0000 (17:24 +0200)]
Updating develop poms back to pre merge state
jenkins [Wed, 14 Jun 2023 15:24:33 +0000 (17:24 +0200)]
Merge branch 'master' into develop
jenkins [Wed, 14 Jun 2023 15:24:32 +0000 (17:24 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Wed, 14 Jun 2023 15:24:26 +0000 (17:24 +0200)]
Merge branch 'release/5.39.0'
jenkins [Wed, 14 Jun 2023 15:12:17 +0000 (17:12 +0200)]
updating poms for branch'release/5.39.0' with non-snapshot versions
jenkins [Wed, 14 Jun 2023 14:58:37 +0000 (16:58 +0200)]
updating poms for 5.40.0-SNAPSHOT development
Andreas Müller [Wed, 14 Jun 2023 11:14:06 +0000 (13:14 +0200)]
Revert "ref #10322 by default use distribution treeDto"
This reverts commit
2e46c8021c5ce6276203860af3f9e1652c4759b9.
Andreas Müller [Wed, 14 Jun 2023 08:44:09 +0000 (10:44 +0200)]
ref #9502 remove tests without value (computed marker)
Andreas Müller [Wed, 14 Jun 2023 00:37:14 +0000 (02:37 +0200)]
ref #9502 try to implement multiple parents for CondensedDistributionComposer (fix Cuba tests and some cleanup)
Andreas Müller [Wed, 14 Jun 2023 00:15:23 +0000 (02:15 +0200)]
ref #9502 fix handling for multiple parents in distribution filter (continue fix)
Andreas Müller [Wed, 14 Jun 2023 00:00:06 +0000 (02:00 +0200)]
ref #9502 try to implement multiple parents for CondensedDistributionComposer (still needs cleanup)
Andreas Müller [Tue, 13 Jun 2023 23:58:20 +0000 (01:58 +0200)]
ref #9502 fix handling for multiple parents in distribution filter (try to fix test)
Andreas Müller [Tue, 13 Jun 2023 15:16:44 +0000 (17:16 +0200)]
cleanup
Andreas Müller [Tue, 13 Jun 2023 10:35:06 +0000 (12:35 +0200)]
cleanup
Andreas Müller [Tue, 13 Jun 2023 10:34:49 +0000 (12:34 +0200)]
ref #9502 fix handling for multiple parents in distribution filter
Andreas Müller [Tue, 13 Jun 2023 08:45:38 +0000 (10:45 +0200)]
ref #9502 add second method for loading distribution tree based on term tree (incl. annotations) - fix NPE
Andreas Müller [Tue, 13 Jun 2023 08:13:53 +0000 (10:13 +0200)]
ref #9502 add second method for loading distribution tree based on term tree (incl. annotations)
Andreas Müller [Tue, 13 Jun 2023 07:55:55 +0000 (09:55 +0200)]
Allow retrieving a map for terms included in a term tree
Andreas Müller [Tue, 13 Jun 2023 07:41:22 +0000 (09:41 +0200)]
ref #10346, ref #10327 fine tuning for IUCN cond distr str for subarea handling
Andreas Müller [Mon, 12 Jun 2023 20:54:01 +0000 (22:54 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 17:31:17 +0000 (19:31 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 17:31:17 +0000 (19:31 +0200)]
cleanup
Katja Luther [Mon, 12 Jun 2023 07:50:26 +0000 (09:50 +0200)]
remove unreachable code
Andreas Müller [Sat, 10 Jun 2023 17:26:13 +0000 (19:26 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 15:40:14 +0000 (17:40 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 09:17:13 +0000 (11:17 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 08:35:50 +0000 (10:35 +0200)]
cleanup
Andreas Müller [Sat, 10 Jun 2023 08:34:06 +0000 (10:34 +0200)]
ref #10335 fix NPE in TermNodeDto
Andreas Müller [Fri, 9 Jun 2023 22:26:46 +0000 (00:26 +0200)]
ref #10326 javadoc and further tests
Andreas Müller [Fri, 9 Jun 2023 21:48:02 +0000 (23:48 +0200)]
ref #10326 try to fix incorrect alternativeRootArea handling
Andreas Müller [Fri, 9 Jun 2023 20:29:10 +0000 (22:29 +0200)]
cleanup