Andreas Müller [Thu, 13 Oct 2016 21:53:28 +0000 (23:53 +0200)]
cleanup
Andreas Müller [Thu, 13 Oct 2016 14:59:49 +0000 (16:59 +0200)]
fix #5952 Add fieldNumberCache
Andreas Müller [Thu, 13 Oct 2016 14:23:40 +0000 (16:23 +0200)]
fix #5981 Add abbreviation to Rank "Cultivar"
Andreas Müller [Thu, 13 Oct 2016 11:14:34 +0000 (13:14 +0200)]
ref #3658 remove nomenclaturalCode from all datasource related classes
* and rename NomenclaturalCodeAwareDataSource
Andreas Müller [Thu, 13 Oct 2016 09:57:19 +0000 (11:57 +0200)]
ref #3658 Update nomenclatural code as CdmPreference (most probable value)
Andreas Müller [Thu, 13 Oct 2016 09:52:32 +0000 (11:52 +0200)]
cleanup
Andreas Müller [Thu, 13 Oct 2016 09:52:22 +0000 (11:52 +0200)]
ref #3658 Update nomenclatural code as CdmPreference (most probable value)
Andreas Müller [Thu, 13 Oct 2016 09:09:45 +0000 (11:09 +0200)]
ref #5974 Replace synonym relationship update scripts (untested)
Andreas Müller [Thu, 13 Oct 2016 09:09:03 +0000 (11:09 +0200)]
clean up and java doc
Andreas Müller [Thu, 13 Oct 2016 09:07:59 +0000 (11:07 +0200)]
#3547 remove not needed dataset.dtd from persistence
Andreas Müller [Thu, 13 Oct 2016 07:58:11 +0000 (09:58 +0200)]
ref #5974 Replace synonymRelationshipType by SynonymType and replace some other occurrences of synonym relationship
Andreas Müller [Wed, 12 Oct 2016 19:00:32 +0000 (21:00 +0200)]
ref #5974 Remove synonym relationship first compiling implementation in cdmlib
Andreas Müller [Fri, 7 Oct 2016 17:06:58 +0000 (19:06 +0200)]
ref #3547 remove testDelete-result1 and cleanup and reuse testDelete-result
Andreas Müller [Fri, 7 Oct 2016 16:30:43 +0000 (18:30 +0200)]
ref #3547 Cleanup TaxonDaoHibernateImplTest.xml
Andreas Müller [Fri, 7 Oct 2016 14:56:44 +0000 (16:56 +0200)]
ref #3547 fix related tests
Andreas Müller [Fri, 7 Oct 2016 14:06:04 +0000 (16:06 +0200)]
ref #3547 Cleanup TaxonDao.testGetTaxaByNameAndArea.xml test data a bit
Andreas Müller [Fri, 7 Oct 2016 13:46:25 +0000 (15:46 +0200)]
ref #3547 Cleanup TaxonDao.testFindDeleted test data
Andreas Müller [Fri, 7 Oct 2016 13:30:54 +0000 (15:30 +0200)]
ref #3547 Cleanup TaxonDao.testFind test data
Andreas Müller [Fri, 7 Oct 2016 13:06:14 +0000 (15:06 +0200)]
fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount, fix Testdata
Andreas Müller [Fri, 7 Oct 2016 09:22:27 +0000 (11:22 +0200)]
fix #6089 Remove taxonomicParentCache and taxonomicChildrenCount from Taxon
Andreas Müller [Fri, 7 Oct 2016 09:17:49 +0000 (11:17 +0200)]
remove ImportReport in model branch
Andreas Müller [Thu, 6 Oct 2016 14:57:47 +0000 (16:57 +0200)]
minor
Andreas Müller [Thu, 6 Oct 2016 14:57:15 +0000 (16:57 +0200)]
ref #5499 add some markerType methods
Andreas Müller [Thu, 6 Oct 2016 14:16:34 +0000 (16:16 +0200)]
fix #6122 fix signature issue
Andreas Müller [Thu, 6 Oct 2016 12:51:36 +0000 (14:51 +0200)]
fix #6122 add titleCache service to remote
Andreas Müller [Thu, 6 Oct 2016 12:38:25 +0000 (14:38 +0200)]
Use abstract controller for identifiable controllers
Andreas Müller [Thu, 6 Oct 2016 12:32:23 +0000 (14:32 +0200)]
Create and rename Identifiable(List)Controllers
Andreas Müller [Thu, 6 Oct 2016 12:24:32 +0000 (14:24 +0200)]
fix #6122 add titleCache service
Andreas Müller [Thu, 6 Oct 2016 11:24:42 +0000 (13:24 +0200)]
fx #6119 Implement uuidAndTitleCache remote services
Andreas Müller [Thu, 6 Oct 2016 10:36:53 +0000 (12:36 +0200)]
fix #6120 Cleanup uuidAndTitleCache methods
Andreas Müller [Tue, 4 Oct 2016 12:26:42 +0000 (14:26 +0200)]
Minor cleanup
Katja Luther [Fri, 30 Sep 2016 19:09:04 +0000 (21:09 +0200)]
add missing changes
Katja Luther [Fri, 30 Sep 2016 14:34:25 +0000 (16:34 +0200)]
minor
Katja Luther [Fri, 30 Sep 2016 14:09:54 +0000 (16:09 +0200)]
specimen import/search changes
Katja Luther [Tue, 27 Sep 2016 06:55:31 +0000 (08:55 +0200)]
delete system.out.println from test
jenkins [Fri, 23 Sep 2016 13:37:31 +0000 (15:37 +0200)]
Updating develop poms back to pre merge state
jenkins [Fri, 23 Sep 2016 13:37:29 +0000 (15:37 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Fri, 23 Sep 2016 13:19:49 +0000 (15:19 +0200)]
updating poms for branch'release/4.3.0' with non-snapshot versions
jenkins [Fri, 23 Sep 2016 13:09:41 +0000 (15:09 +0200)]
updating poms for 4.4.0-SNAPSHOT development
Andreas Müller [Fri, 23 Sep 2016 12:48:37 +0000 (14:48 +0200)]
Rename doPageChildNodes
Andreas Müller [Fri, 23 Sep 2016 09:40:44 +0000 (11:40 +0200)]
ref #6065 improved Pager handling
Andreas Müller [Fri, 23 Sep 2016 09:04:26 +0000 (11:04 +0200)]
ref #6065 improved Pager handling and pager exception handling
Andreas Müller [Fri, 23 Sep 2016 09:03:05 +0000 (11:03 +0200)]
ref #6065 Handle synonyms in taxonInContext
Andreas Müller [Fri, 23 Sep 2016 09:00:49 +0000 (11:00 +0200)]
Cleanup
Andreas Müller [Thu, 22 Sep 2016 12:10:54 +0000 (14:10 +0200)]
ref #6065 fix NPEs in classification service
Andreas Müller [Thu, 22 Sep 2016 11:25:20 +0000 (13:25 +0200)]
ref #6065 fix NPE in pageSize/limit
Andreas Müller [Thu, 22 Sep 2016 10:27:27 +0000 (12:27 +0200)]
ref #6065 fix NPE in pageSize
Andreas Müller [Thu, 22 Sep 2016 09:20:16 +0000 (11:20 +0200)]
ref #6065 fix page size and add marked ancestors
Andreas Müller [Thu, 22 Sep 2016 08:37:00 +0000 (10:37 +0200)]
ref #6065 fix missing taxonUuid in URL
Andreas Müller [Wed, 21 Sep 2016 15:49:13 +0000 (17:49 +0200)]
ref #6065 first implementation of taxonInContext service
Andreas Müller [Wed, 21 Sep 2016 15:47:07 +0000 (17:47 +0200)]
cleanup
Andreas Müller [Wed, 21 Sep 2016 13:11:48 +0000 (15:11 +0200)]
further refactor FindByIdentifierDTO and FindByMarkerDTO
Andreas Müller [Wed, 21 Sep 2016 12:48:45 +0000 (14:48 +0200)]
rename FindByIdentifierDTO and FindByMarkerDTO
Andreas Kohlbecker [Wed, 21 Sep 2016 09:24:49 +0000 (11:24 +0200)]
Revert "fix #6037 per batch transction commit implemented for excel imports"
This reverts commit
53067226137bd8528e6bc26f21edbf98aebe26a9.
Andreas Müller [Wed, 21 Sep 2016 08:51:19 +0000 (10:51 +0200)]
ref #6066 rename childNodes to childNodesByTaxon in ClassificationController
Andreas Müller [Wed, 21 Sep 2016 08:07:46 +0000 (10:07 +0200)]
ref #6066 add getChildNodes to classification service
Andreas Kohlbecker [Tue, 20 Sep 2016 15:16:00 +0000 (17:16 +0200)]
ref #6087 adding orderINdex to TermDTO
Andreas Müller [Tue, 20 Sep 2016 11:51:45 +0000 (13:51 +0200)]
ref #6066 fix Index out of bound exception
Katja Luther [Mon, 19 Sep 2016 11:12:17 +0000 (13:12 +0200)]
fix #6061: search in titlecache and nomenclatural titleCache in getUuidAndAbbrevTitleCache
Katja Luther [Mon, 19 Sep 2016 08:08:51 +0000 (10:08 +0200)]
fix failing IPNI Service Test
Andreas Müller [Sat, 17 Sep 2016 05:52:39 +0000 (07:52 +0200)]
revert tests
Andreas Müller [Sat, 17 Sep 2016 05:21:16 +0000 (07:21 +0200)]
Ignore service test
Andreas Müller [Sat, 17 Sep 2016 05:04:59 +0000 (07:04 +0200)]
ref #6072 test missing entity in webservice
Andreas Müller [Fri, 16 Sep 2016 21:18:51 +0000 (23:18 +0200)]
ref #6072 test missing entity in webservice
Andreas Müller [Fri, 16 Sep 2016 20:35:16 +0000 (22:35 +0200)]
ref #6072 set defaults to false and hardcode includeEntity to true for debugging
Andreas Müller [Fri, 16 Sep 2016 17:56:48 +0000 (19:56 +0200)]
ref #6072 fix signature issue in remote (2nd try)
Andreas Müller [Fri, 16 Sep 2016 17:31:27 +0000 (19:31 +0200)]
ref #6072 fix signature issue in remote
Andreas Müller [Fri, 16 Sep 2016 17:03:44 +0000 (19:03 +0200)]
ref #6072 fix compilation issue in IIdentifiableEntityService
Andreas Müller [Fri, 16 Sep 2016 15:30:16 +0000 (17:30 +0200)]
Cleanup
Andreas Müller [Fri, 16 Sep 2016 15:30:05 +0000 (17:30 +0200)]
fix #6072 Implement findIdentifiableEntityByMarkers
Andreas Müller [Thu, 15 Sep 2016 21:20:43 +0000 (23:20 +0200)]
ref #6089 Remove failing irrelevant test
Andreas Müller [Thu, 15 Sep 2016 21:09:27 +0000 (23:09 +0200)]
ref #6089 Remove all calls and methods for taxonomicChildrenCount and taxonomicParentCache
Andreas Müller [Thu, 15 Sep 2016 21:00:49 +0000 (23:00 +0200)]
Cleanup; Delete unnecessary test classes.
Andreas Müller [Thu, 15 Sep 2016 16:13:17 +0000 (18:13 +0200)]
fix #6066 Implement doPageChildNodes with doSynonyms
Andreas Müller [Thu, 15 Sep 2016 16:08:45 +0000 (18:08 +0200)]
Clean up
Andreas Müller [Thu, 15 Sep 2016 16:04:40 +0000 (18:04 +0200)]
Adapt failing test in NonViralNameParserImplTest
Andreas Kohlbecker [Thu, 15 Sep 2016 13:33:19 +0000 (15:33 +0200)]
ref #6086 solving the problems in the java-script of the web application monitor widget:
- chunk information: number rounded and label renamed
- Percentage number rounding fixed
Andreas Müller [Thu, 15 Sep 2016 13:10:32 +0000 (15:10 +0200)]
ref #6086 fix failing test
Andreas Müller [Thu, 15 Sep 2016 12:27:43 +0000 (14:27 +0200)]
rel #6086 Improve rounding for progress monitor
* fix error in rounding by using round not ceil
* add method for user defined scaled rounding
Andreas Müller [Thu, 15 Sep 2016 12:21:20 +0000 (14:21 +0200)]
some cleanup
Katja Luther [Thu, 15 Sep 2016 08:41:47 +0000 (10:41 +0200)]
fix #5837: search on abbrevTitleCache instead of abbrev title
Andreas Kohlbecker [Wed, 14 Sep 2016 15:11:20 +0000 (17:11 +0200)]
correcting erroneous commit
Andreas Kohlbecker [Tue, 13 Sep 2016 16:25:39 +0000 (18:25 +0200)]
gitignore
Andreas Kohlbecker [Tue, 13 Sep 2016 14:47:51 +0000 (16:47 +0200)]
fix #4497 solving problem with status parameter in taxon search
Katja Luther [Tue, 13 Sep 2016 09:48:06 +0000 (11:48 +0200)]
ref #5969: add PreferenceService to applicationController
Patrick Plitzner [Tue, 13 Sep 2016 05:20:19 +0000 (07:20 +0200)]
Remove duplicate method
Andreas Müller [Mon, 12 Sep 2016 14:42:26 +0000 (16:42 +0200)]
rel #5957 improve tests for groupTaxaByHigherTaxon
Andreas Müller [Mon, 12 Sep 2016 14:25:07 +0000 (16:25 +0200)]
fix #5957 fix IndexOutOfBound exception and some other improvements for groupByHigherTaxon
Andreas Müller [Mon, 12 Sep 2016 14:23:04 +0000 (16:23 +0200)]
minor
Andreas Kohlbecker [Mon, 12 Sep 2016 13:28:35 +0000 (15:28 +0200)]
better percentage values from Progressmonitor
Katja Luther [Mon, 12 Sep 2016 12:59:36 +0000 (14:59 +0200)]
fix #6061: search for titlecache if abbrev title is empty
Katja Luther [Mon, 12 Sep 2016 12:58:18 +0000 (14:58 +0200)]
fix #6061: smaller changes
Patrick Plitzner [Mon, 12 Sep 2016 11:34:56 +0000 (13:34 +0200)]
ref #6032 Remove test for rank as mentioned in ticket
Andreas Müller [Fri, 9 Sep 2016 14:38:03 +0000 (16:38 +0200)]
Add Vorabdr. to parsable volume
Katja Luther [Fri, 9 Sep 2016 11:34:00 +0000 (13:34 +0200)]
minor
Katja Luther [Fri, 9 Sep 2016 11:20:44 +0000 (13:20 +0200)]
minor
Katja Luther [Fri, 9 Sep 2016 10:58:21 +0000 (12:58 +0200)]
smaller changes for importing nom. reference in normal explicit excel import
Katja Luther [Fri, 9 Sep 2016 10:29:41 +0000 (12:29 +0200)]
normal explicit excel import: add reference to name import
Andreas Müller [Fri, 9 Sep 2016 09:37:20 +0000 (11:37 +0200)]
Add javadoc for languages
Andreas Müller [Thu, 8 Sep 2016 14:51:40 +0000 (16:51 +0200)]
fix #6060 parse author with -e-