Andreas Müller [Mon, 31 Aug 2020 21:44:43 +0000 (23:44 +0200)]
Revert "ref #6581 try to fix exception in MatchStrategyConfigurator"
This reverts commit
e807e4380fddd21b2ac521057462a0d03cab298f.
Andreas Müller [Mon, 31 Aug 2020 21:41:50 +0000 (23:41 +0200)]
ref #6581 try to fix exception in MatchStrategyConfigurator
Andreas Müller [Mon, 31 Aug 2020 21:40:45 +0000 (23:40 +0200)]
try to fix exception in MatchStrategyConfigurator
Andreas Müller [Mon, 31 Aug 2020 21:40:10 +0000 (23:40 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 19:25:26 +0000 (21:25 +0200)]
add KeyStatement to PermissionClass
Andreas Müller [Mon, 31 Aug 2020 17:34:05 +0000 (19:34 +0200)]
ref #9204 update jaxb to version 2.3.3 (fix compile error with ZipWriter)
Andreas Müller [Mon, 31 Aug 2020 17:20:13 +0000 (19:20 +0200)]
ref #9204 update jaxb to version 2.3.3
Andreas Müller [Mon, 31 Aug 2020 17:16:33 +0000 (19:16 +0200)]
ceanup
Andreas Müller [Mon, 31 Aug 2020 16:01:25 +0000 (18:01 +0200)]
preliminary ignore GeoService tests
Andreas Müller [Mon, 31 Aug 2020 16:01:05 +0000 (18:01 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 15:38:26 +0000 (17:38 +0200)]
ref #9204 update sqlserver driver to new and maven available version 8.4.1.jre8 (cont.)
Andreas Müller [Mon, 31 Aug 2020 15:35:50 +0000 (17:35 +0200)]
ref #9204 update sqlserver driver to new and maven available version 8.4.1.jre8
Andreas Müller [Mon, 31 Aug 2020 15:04:32 +0000 (17:04 +0200)]
unignore geoservice tests
Andreas Müller [Mon, 31 Aug 2020 15:03:12 +0000 (17:03 +0200)]
preliminary ignore 2 mapservice tests
Andreas Müller [Mon, 31 Aug 2020 14:14:01 +0000 (16:14 +0200)]
ref #9204 partly revert removing of hibernate-validator dependencies in cdmlib
Andreas Müller [Mon, 31 Aug 2020 12:53:39 +0000 (14:53 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 12:47:56 +0000 (14:47 +0200)]
ref #9204 remove redundant commons-io dependencies (and doc)
Andreas Müller [Mon, 31 Aug 2020 12:25:47 +0000 (14:25 +0200)]
ref #9204 remove fixed avalon-framework version
Andreas Müller [Mon, 31 Aug 2020 10:55:04 +0000 (12:55 +0200)]
fix MobotOpenUrlServiceWrapperTest by adapting expected result
Andreas Müller [Mon, 31 Aug 2020 10:54:30 +0000 (12:54 +0200)]
ref #9204 remove exclusions for fop (as not valid for the new version anymore)
Andreas Müller [Mon, 31 Aug 2020 10:53:43 +0000 (12:53 +0200)]
cleanup
Andreas Müller [Mon, 31 Aug 2020 10:12:44 +0000 (12:12 +0200)]
ref #8978 adapt StructuredDescriptionAggregationTest to BigDecimal (remaining issues)
Andreas Müller [Mon, 31 Aug 2020 09:55:33 +0000 (11:55 +0200)]
add DescriptiveDataSet_TaxonNode to ClearDBDataSet files
Andreas Müller [Fri, 28 Aug 2020 13:20:18 +0000 (15:20 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 13:19:34 +0000 (15:19 +0200)]
ref #6581 adapt SpecimenImportConfiguratorTest test data
Andreas Müller [Fri, 28 Aug 2020 11:23:04 +0000 (13:23 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 11:22:49 +0000 (13:22 +0200)]
ref #6581 adapt StatisticsDaoHibernateImpl to TaxonNode.source
Andreas Müller [Fri, 28 Aug 2020 11:15:52 +0000 (13:15 +0200)]
ref #6581 remove referenceForParentChildRelation from 001-cdm.h2.sql
Andreas Müller [Fri, 28 Aug 2020 11:12:39 +0000 (13:12 +0200)]
ref #6581 fix testdata for DerivedUnitConverterIntegrationTest.cascadeDelete
Andreas Müller [Fri, 28 Aug 2020 11:05:44 +0000 (13:05 +0200)]
ref #6581 update dataset.dtd in cdmlib
Andreas Müller [Fri, 28 Aug 2020 10:55:43 +0000 (12:55 +0200)]
cleanup
Andreas Müller [Fri, 28 Aug 2020 10:50:31 +0000 (12:50 +0200)]
ignore index files created by CdmModelCacher
Andreas Müller [Fri, 28 Aug 2020 10:43:40 +0000 (12:43 +0200)]
ref #6581 remove unused reference and microreference fields from SingleSourced classes (incl. TypeDesignationBase)
Andreas Müller [Thu, 27 Aug 2020 22:10:20 +0000 (00:10 +0200)]
ref #6581 !!! PRELIMINARY IGNORE TaxonNameDefaultCacheStrategyTest !!!
Andreas Müller [Thu, 27 Aug 2020 22:08:23 +0000 (00:08 +0200)]
ref #6581 improve setNomenclaturalReference(...) handling
Andreas Müller [Thu, 27 Aug 2020 22:07:48 +0000 (00:07 +0200)]
ref #6581 fix ReferringObjectMetadataFactoryTest.xml
Andreas Müller [Thu, 27 Aug 2020 22:07:08 +0000 (00:07 +0200)]
ref #6581 fully remove nomenclaturalReference and nomenclaturalMicroReference fields from TaxonName (cont.)
Andreas Müller [Thu, 27 Aug 2020 21:48:27 +0000 (23:48 +0200)]
ref #6581 !!! PRELIMINARY IGNORE TaxonGraphHibernateListenerTest !!!
Andreas Müller [Thu, 27 Aug 2020 21:47:43 +0000 (23:47 +0200)]
ref #6581 fully remove nomenclaturalReference and nomenclaturalMicroReference fields from TaxonName
Andreas Müller [Thu, 27 Aug 2020 21:46:49 +0000 (23:46 +0200)]
ref #6581 adapt NoDuplicateNamesValidator to nomenclaturalSource (doubtful if correct, but all this validation rule must be refactored)
Andreas Müller [Thu, 27 Aug 2020 21:45:19 +0000 (23:45 +0200)]
ref #6581 adapt TaxonGraphBeforeTransactionCompleteProcess to nomenclaturalSource
Andreas Müller [Thu, 27 Aug 2020 17:00:32 +0000 (19:00 +0200)]
ref #6581 remove or adapt nomenclaturalReference in service test data (and some removing of not needed data)
Andreas Müller [Thu, 27 Aug 2020 16:56:42 +0000 (18:56 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 16:54:30 +0000 (18:54 +0200)]
ref #6581 update HQL and property paths and similar to nomenclaturalSource (some issues unclear)
Andreas Müller [Thu, 27 Aug 2020 16:39:59 +0000 (18:39 +0200)]
remove unused MediaDaoImplTest.xml from cdmlib-service
Andreas Müller [Thu, 27 Aug 2020 13:19:13 +0000 (15:19 +0200)]
ref #6581 remove CITATIONMICROREFERENCE from TaxonRelationship in test data
Andreas Müller [Thu, 27 Aug 2020 13:18:30 +0000 (15:18 +0200)]
ref #6581 adapt links to nomenclaturalReference in persistence test data
Andreas Müller [Thu, 27 Aug 2020 13:18:02 +0000 (15:18 +0200)]
ref #6581 remove unnecessary links to nomenclaturalReference in persistence test data
Andreas Müller [Thu, 27 Aug 2020 13:14:20 +0000 (15:14 +0200)]
ref #6581 adapt search in ReferenceDaoHibernateImpl
Andreas Müller [Thu, 27 Aug 2020 13:13:26 +0000 (15:13 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 11:53:06 +0000 (13:53 +0200)]
remove created data from test data
Andreas Müller [Thu, 27 Aug 2020 11:52:17 +0000 (13:52 +0200)]
ref #6581 remove unnecessary nomenclaturalReference_ids from test data
Andreas Müller [Thu, 27 Aug 2020 11:45:14 +0000 (13:45 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 09:58:04 +0000 (11:58 +0200)]
ref #6581 remove null values for citationmicroreference and citation_id from test data
Andreas Müller [Thu, 27 Aug 2020 09:47:29 +0000 (11:47 +0200)]
ref #6581 fix test data with nomenclaturalMicroReference not being null
Andreas Müller [Thu, 27 Aug 2020 09:46:53 +0000 (11:46 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 09:27:31 +0000 (11:27 +0200)]
remove null values from test with in Reference, TypeDesginationBase and Person
Andreas Müller [Thu, 27 Aug 2020 09:11:56 +0000 (11:11 +0200)]
ref #6581 adapt list/count query in RegistrationDaoHibernateImpl
Andreas Müller [Thu, 27 Aug 2020 09:09:32 +0000 (11:09 +0200)]
cleanup
Andreas Müller [Thu, 27 Aug 2020 09:08:44 +0000 (11:08 +0200)]
ref #6581 fix RegistrationServiceTest test data
Andreas Müller [Thu, 27 Aug 2020 09:06:47 +0000 (11:06 +0200)]
ref #6581 fix source type in TypeDesignationBase
Andreas Müller [Thu, 27 Aug 2020 08:32:43 +0000 (10:32 +0200)]
delete null values for updated, createdBy, updatedBy, LSID and some TaxonName attributes from testdata
Andreas Müller [Thu, 27 Aug 2020 07:37:57 +0000 (09:37 +0200)]
ref #6581 remove null-values for nomenclaturalReference and nomenclaturalMicroReference from Test-Files
Andreas Müller [Thu, 27 Aug 2020 05:12:05 +0000 (07:12 +0200)]
ref #6581 fix further testdata for nomenclatural reference testing
Andreas Müller [Thu, 27 Aug 2020 05:10:08 +0000 (07:10 +0200)]
cleanup
Andreas Müller [Wed, 26 Aug 2020 20:57:42 +0000 (22:57 +0200)]
cleanup
Andreas Müller [Wed, 26 Aug 2020 15:01:46 +0000 (17:01 +0200)]
ref #6581 fix further tests
Andreas Müller [Wed, 26 Aug 2020 15:01:06 +0000 (17:01 +0200)]
cleanup
Andreas Müller [Wed, 26 Aug 2020 14:35:39 +0000 (16:35 +0200)]
ref #6581 fix persistence tests (except for 1)
Andreas Müller [Wed, 26 Aug 2020 13:00:03 +0000 (15:00 +0200)]
ref #6581 adapt registration tests to new source handling in typeDesignation and for nomenclaturalReference
Andreas Müller [Wed, 26 Aug 2020 12:58:38 +0000 (14:58 +0200)]
cleanup
Katja Luther [Wed, 26 Aug 2020 12:40:31 +0000 (14:40 +0200)]
ref #6581: activate nomenclatural source
Andreas Müller [Wed, 26 Aug 2020 12:10:54 +0000 (14:10 +0200)]
cleanup
Katja Luther [Wed, 26 Aug 2020 12:06:47 +0000 (14:06 +0200)]
adapt query to original source
Katja Luther [Wed, 26 Aug 2020 11:41:56 +0000 (13:41 +0200)]
ref #6581: fix problems with getter and setter
Katja Luther [Wed, 26 Aug 2020 11:16:52 +0000 (13:16 +0200)]
ref #6581: adapt getter/setter of citation/microcitation in typedesignationbase
Katja Luther [Wed, 26 Aug 2020 10:48:02 +0000 (12:48 +0200)]
ref #9199: adapt TypeDesignationBase to usage of source
Andreas Müller [Wed, 26 Aug 2020 10:18:56 +0000 (12:18 +0200)]
cleanup
Andreas Müller [Wed, 26 Aug 2020 10:18:32 +0000 (12:18 +0200)]
ref #9204 revert removing commons-dbcp from persistence-pom as it is used as base class for LocalH2
Andreas Müller [Wed, 26 Aug 2020 08:40:33 +0000 (10:40 +0200)]
ref #9204 remove slf4j-log4j12 from persistence pom as it exists in cdmlib-model already
Andreas Müller [Wed, 26 Aug 2020 08:38:25 +0000 (10:38 +0200)]
ref #9204, ref #6714 remove antrun-plugin for EnversHibernateToolTask in cdmlib-persistence
Andreas Müller [Wed, 26 Aug 2020 08:36:26 +0000 (10:36 +0200)]
cleanup
Andreas Müller [Wed, 26 Aug 2020 08:35:47 +0000 (10:35 +0200)]
ref #9204 remove commons-dbcp from persistence-pom as NomenclaturalCodeAwareDataSource does not exist anymore
Andreas Müller [Tue, 25 Aug 2020 22:04:17 +0000 (00:04 +0200)]
ref #9204 update spring schema version in some spring configuration files
Andreas Müller [Tue, 25 Aug 2020 22:02:51 +0000 (00:02 +0200)]
ref #9208 move TermRepresentation_L10n, LocaleContext and KeyTerm_L10n from remote to service (cont.)
Andreas Müller [Tue, 25 Aug 2020 21:19:43 +0000 (23:19 +0200)]
ref #9208 rename service.i18n to service.l10n
Andreas Müller [Tue, 25 Aug 2020 21:11:34 +0000 (23:11 +0200)]
ref #9208 move TermRepresentation_L10n, LocaleContext and KeyTerm_L10n from remote to service (to have in taxeditor.cdmlib)
Andreas Müller [Tue, 25 Aug 2020 16:35:16 +0000 (18:35 +0200)]
ref #9207 exclude ehcache-core from dependencies
Andreas Müller [Tue, 25 Aug 2020 16:34:07 +0000 (18:34 +0200)]
ref #9207 adapt CdmTransientEntityCacher to new ehcache version
Andreas Müller [Tue, 25 Aug 2020 16:05:48 +0000 (18:05 +0200)]
ref #9207, ref #9204 upgrade ehcache-core to ehcache 2.10.6 (further upgrade to 3.8.1 is planned, but has different groupId)
Andreas Müller [Tue, 25 Aug 2020 15:59:10 +0000 (17:59 +0200)]
ref #9207 remove ehcache-core dependency from cdmlib-services as it is already in cdmlib-model
Andreas Müller [Tue, 25 Aug 2020 15:58:07 +0000 (17:58 +0200)]
ref #9207, ref #9204 remove hibernate-ehcache from cdmlib-remote dependencies
Andreas Müller [Tue, 25 Aug 2020 15:34:47 +0000 (17:34 +0200)]
ref #9206, ref #9204 exclude cglib dependency from unitils-easymock
Andreas Müller [Tue, 25 Aug 2020 15:09:41 +0000 (17:09 +0200)]
ref #9204 remove cglib dependency management from cdmlib, only cglib-nodep is used
Andreas Müller [Tue, 25 Aug 2020 15:08:15 +0000 (17:08 +0200)]
ref #9204 fully remove hsqldb dependency
Andreas Müller [Tue, 25 Aug 2020 14:53:34 +0000 (16:53 +0200)]
ref #9204 , ref #9206 remove hibernate-cglib-repack from cdmlib-remote
Andreas Müller [Mon, 24 Aug 2020 23:37:54 +0000 (01:37 +0200)]
fix 6714 preliminary add generated 001-cdm.h2.sql (cont.)
Andreas Müller [Mon, 24 Aug 2020 23:16:45 +0000 (01:16 +0200)]
fix 6714 preliminary add generated 001-cdm.h2.sql
Andreas Müller [Mon, 24 Aug 2020 23:11:26 +0000 (01:11 +0200)]
fix OccurrenceServiceTest.testIsDeletableWithSpecimenDescription
Andreas Müller [Mon, 24 Aug 2020 22:55:46 +0000 (00:55 +0200)]
fix 6714 add old 001-cdm.h2.sql to gitignore