Andreas Müller [Fri, 20 Oct 2023 12:58:29 +0000 (14:58 +0200)]
fix #10420 order exact values in QuantitativeDataFormatter
Andreas Müller [Fri, 20 Oct 2023 10:47:59 +0000 (12:47 +0200)]
fix #10419 fix collector title handling for protected titleCache collectors
Andreas Müller [Fri, 20 Oct 2023 09:19:11 +0000 (11:19 +0200)]
cleanup
Katja Luther [Fri, 20 Oct 2023 08:34:17 +0000 (10:34 +0200)]
code cleaning and add test for nomenclatural code
Andreas Müller [Fri, 20 Oct 2023 08:02:04 +0000 (10:02 +0200)]
cleanup
Andreas Müller [Thu, 19 Oct 2023 13:49:19 +0000 (15:49 +0200)]
minor
Andreas Müller [Thu, 19 Oct 2023 13:45:35 +0000 (15:45 +0200)]
ref #10393 code cleanup
Andreas Müller [Thu, 19 Oct 2023 13:32:58 +0000 (15:32 +0200)]
cleanup
Andreas Müller [Thu, 19 Oct 2023 13:22:15 +0000 (15:22 +0200)]
cleanup indentation
Andreas Müller [Thu, 19 Oct 2023 13:18:51 +0000 (15:18 +0200)]
cleanup
Katja [Thu, 19 Oct 2023 13:15:21 +0000 (15:15 +0200)]
ref #10394: order the quantitative data
Andreas Müller [Thu, 19 Oct 2023 12:58:42 +0000 (14:58 +0200)]
ref #10394 cleanup code after fix (cont.)
Andreas Müller [Thu, 19 Oct 2023 12:13:41 +0000 (14:13 +0200)]
cleanup
Andreas Müller [Thu, 19 Oct 2023 12:13:26 +0000 (14:13 +0200)]
ref #10394 cleanup code after fix
Andreas Müller [Thu, 19 Oct 2023 11:11:35 +0000 (13:11 +0200)]
ref #10394 remove null check for HibernateProxyHelper.deproxy
Andreas Müller [Wed, 18 Oct 2023 13:17:18 +0000 (15:17 +0200)]
ref #10385, ref #10387 add transliteration to CommonNameDto
Katja [Wed, 18 Oct 2023 09:48:02 +0000 (11:48 +0200)]
ref #10394: fix QuantitativeDataDescriptionBuilder
Katja Luther [Tue, 17 Oct 2023 16:34:44 +0000 (18:34 +0200)]
ref #10410: adapt test
Katja Luther [Tue, 17 Oct 2023 13:01:16 +0000 (15:01 +0200)]
ref #10410: adapt dto creation
Katja [Tue, 17 Oct 2023 10:25:48 +0000 (12:25 +0200)]
ref #10397: check also for typespecimen
Katja Luther [Mon, 16 Oct 2023 10:59:54 +0000 (12:59 +0200)]
ref #10397: add check for IndividualsAssociation
Katja Luther [Fri, 13 Oct 2023 05:52:50 +0000 (07:52 +0200)]
ref #10397: revert continue
Katja Luther [Thu, 12 Oct 2023 10:47:02 +0000 (12:47 +0200)]
ref #10397: revert last changes - continue
Andreas Müller [Thu, 12 Oct 2023 10:24:27 +0000 (12:24 +0200)]
ref #2975 for label for not interpretable
Katja Luther [Thu, 12 Oct 2023 08:39:32 +0000 (10:39 +0200)]
ref #10397: revert last changes
Katja Luther [Thu, 12 Oct 2023 06:48:07 +0000 (08:48 +0200)]
ref #10398: adapt test to new configurator attribute
Katja Luther [Wed, 11 Oct 2023 12:37:52 +0000 (14:37 +0200)]
ref #10398: importing specimen/taxon rel depending on configurator
Katja Luther [Wed, 11 Oct 2023 11:11:07 +0000 (13:11 +0200)]
ref #10398: smaller changes in SpecimenImportConfigurator
Katja Luther [Wed, 11 Oct 2023 07:12:05 +0000 (09:12 +0200)]
ref #10397: check for taxon associations
Katja Luther [Tue, 10 Oct 2023 13:08:49 +0000 (15:08 +0200)]
ref #5973: add new preference predicate for description handling in
distr editor
Andreas Müller [Tue, 10 Oct 2023 09:40:22 +0000 (11:40 +0200)]
fix potential NPE in DistributionAggregation
Andreas Müller [Mon, 9 Oct 2023 15:05:12 +0000 (17:05 +0200)]
cleanup
Katja Luther [Mon, 9 Oct 2023 09:24:36 +0000 (11:24 +0200)]
ref #7922: collect all descriptions containing distributions except
computed ones
Katja Luther [Fri, 6 Oct 2023 08:37:07 +0000 (10:37 +0200)]
ref #5973: use default description for distribution editor
Katja Luther [Thu, 5 Oct 2023 07:39:25 +0000 (09:39 +0200)]
ref #10410: ignore computed descriptions for distribution editor
Katja Luther [Wed, 4 Oct 2023 12:16:22 +0000 (14:16 +0200)]
fix error in language handling in termDto
Katja Luther [Wed, 4 Oct 2023 12:14:46 +0000 (14:14 +0200)]
ref #10364: add language parameter for rowWrapper creation
Andreas Müller [Wed, 4 Oct 2023 10:36:14 +0000 (12:36 +0200)]
ref #10178 add configurator and matching result to name matching
Andreas Müller [Wed, 4 Oct 2023 10:20:54 +0000 (12:20 +0200)]
cleanup
Katja Luther [Wed, 4 Oct 2023 07:42:37 +0000 (09:42 +0200)]
adapt to moved dtos
Katja Luther [Wed, 4 Oct 2023 07:26:25 +0000 (09:26 +0200)]
ref #10364: adapt dtos and dto handling to using modifiers
Belen Escobari [Tue, 3 Oct 2023 11:58:50 +0000 (13:58 +0200)]
clean up
Andreas Müller [Fri, 29 Sep 2023 18:56:54 +0000 (20:56 +0200)]
add distributionStatusColors computation as commented code
Andreas Müller [Fri, 29 Sep 2023 18:45:49 +0000 (20:45 +0200)]
cleanup
Andreas Müller [Thu, 28 Sep 2023 19:18:28 +0000 (21:18 +0200)]
cleanup
Andreas Müller [Thu, 28 Sep 2023 16:38:48 +0000 (18:38 +0200)]
truncate nameCache if necessary
Andreas Müller [Thu, 28 Sep 2023 10:46:49 +0000 (12:46 +0200)]
cleanup
Andreas Müller [Mon, 25 Sep 2023 17:40:56 +0000 (19:40 +0200)]
ref #9771 fix recursive graph update
Andreas Müller [Mon, 25 Sep 2023 17:39:13 +0000 (19:39 +0200)]
cleanup
Andreas Müller [Fri, 22 Sep 2023 13:54:28 +0000 (15:54 +0200)]
cleanup
Andreas Müller [Fri, 22 Sep 2023 13:38:45 +0000 (15:38 +0200)]
ref #9771 try to fix path issue on linux
Andreas Müller [Fri, 22 Sep 2023 13:13:45 +0000 (15:13 +0200)]
cleanup
Andreas Müller [Fri, 22 Sep 2023 13:12:29 +0000 (15:12 +0200)]
ref #9771 use system tmp directory for other repository and split graph test
Andreas Müller [Fri, 22 Sep 2023 10:06:07 +0000 (12:06 +0200)]
ref #10178 replace DoubleResult by SingleNameMatchingResult
Andreas Müller [Fri, 22 Sep 2023 09:41:25 +0000 (11:41 +0200)]
ref #10178 some comments and code cleaning for name matching
Andreas Müller [Fri, 22 Sep 2023 09:39:25 +0000 (11:39 +0200)]
clean up line endings etc.
Andreas Müller [Thu, 21 Sep 2023 20:10:09 +0000 (22:10 +0200)]
ref #9771 fix configurator setting for adding terms in Cdm2CdmVocabularyImportTest
Andreas Müller [Thu, 21 Sep 2023 19:55:31 +0000 (21:55 +0200)]
ref #9771 fix configurator setting in Cdm2CdmVocabularyImportTest
Andreas Müller [Thu, 21 Sep 2023 13:35:32 +0000 (15:35 +0200)]
ref #9771 , ref #10133 implement add missing terms for term trees
Andreas Müller [Thu, 21 Sep 2023 13:34:17 +0000 (15:34 +0200)]
ref #9771 , ref #10133 allow configuation for addMissingTerms
Andreas Müller [Thu, 21 Sep 2023 13:33:10 +0000 (15:33 +0200)]
ref #9771 , ref #10133 allow importing graphs with partial vocabularies (javadoc)
Andreas Müller [Thu, 21 Sep 2023 13:22:41 +0000 (15:22 +0200)]
cleanup
Andreas Müller [Thu, 21 Sep 2023 13:15:06 +0000 (15:15 +0200)]
ref #10401 adapt NomenclaturalStatusTypeIczn terms in csv
Andreas Müller [Thu, 21 Sep 2023 12:48:03 +0000 (14:48 +0200)]
update labels for some statistical measures (cont.)
Andreas Müller [Thu, 21 Sep 2023 12:40:55 +0000 (14:40 +0200)]
update labels for some statistical measures
Andreas Müller [Thu, 21 Sep 2023 08:36:48 +0000 (10:36 +0200)]
ref #10324 add filter for heterotypic synonyms
Andreas Müller [Thu, 21 Sep 2023 08:35:54 +0000 (10:35 +0200)]
ref #10324 fix mapping for nomenclatural status
Andreas Müller [Thu, 21 Sep 2023 08:35:03 +0000 (10:35 +0200)]
ref #10324 add source to endemics
Andreas Müller [Thu, 21 Sep 2023 08:18:59 +0000 (10:18 +0200)]
cleanup
Katja Luther [Tue, 12 Sep 2023 11:45:00 +0000 (13:45 +0200)]
ref #10393: fix handling of specimen determined to synonyms in two
classifications
Andreas Müller [Thu, 7 Sep 2023 16:52:18 +0000 (18:52 +0200)]
ref #10385 add transliteration to coldp export
jenkins [Thu, 7 Sep 2023 15:30:28 +0000 (17:30 +0200)]
Updating develop poms back to pre merge state
jenkins [Thu, 7 Sep 2023 15:30:27 +0000 (17:30 +0200)]
Merge branch 'master' into develop
jenkins [Thu, 7 Sep 2023 15:30:26 +0000 (17:30 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Thu, 7 Sep 2023 15:30:19 +0000 (17:30 +0200)]
Merge branch 'release/5.40.0'
jenkins [Thu, 7 Sep 2023 15:17:42 +0000 (17:17 +0200)]
updating poms for branch'release/5.40.0' with non-snapshot versions
jenkins [Thu, 7 Sep 2023 14:19:36 +0000 (16:19 +0200)]
updating poms for 5.41.0-SNAPSHOT development
Andreas Müller [Thu, 7 Sep 2023 14:17:12 +0000 (16:17 +0200)]
cleanup
Katja Luther [Thu, 7 Sep 2023 10:34:59 +0000 (12:34 +0200)]
externally managed needs to be set before rootNodeDto
Katja Luther [Wed, 6 Sep 2023 20:18:41 +0000 (22:18 +0200)]
minor
Katja Luther [Wed, 6 Sep 2023 20:17:41 +0000 (22:17 +0200)]
add tree attributes to nodeDto
Belen Escobari [Wed, 6 Sep 2023 12:00:16 +0000 (14:00 +0200)]
ref #10178: matching names including infraspecific.
Andreas Müller [Wed, 6 Sep 2023 11:48:18 +0000 (13:48 +0200)]
cleanup
Andreas Müller [Wed, 6 Sep 2023 11:47:40 +0000 (13:47 +0200)]
ref #10384 move useClassification to more specific configurators where needed
Andreas Müller [Wed, 6 Sep 2023 11:35:12 +0000 (13:35 +0200)]
cleanup
Andreas Müller [Wed, 6 Sep 2023 11:35:12 +0000 (13:35 +0200)]
cleanup
Katja [Wed, 6 Sep 2023 07:56:16 +0000 (09:56 +0200)]
ref #10382: remove '-' from collectorsstring
Andreas Müller [Tue, 5 Sep 2023 17:05:44 +0000 (19:05 +0200)]
cleanup
Andreas Müller [Tue, 5 Sep 2023 17:05:11 +0000 (19:05 +0200)]
fix #10379 deduplication of herbarium code removed in DerivedUnitFacadeCacheStrategy
Andreas Müller [Tue, 5 Sep 2023 09:16:59 +0000 (11:16 +0200)]
ref #10271 remove unnecessary parameters from COL-DP export configurator (cont.) and set createZipFile to true
Andreas Müller [Tue, 5 Sep 2023 08:57:37 +0000 (10:57 +0200)]
ref #10271 remove unnecessary parameters from COL-DP export configurator
Andreas Müller [Tue, 5 Sep 2023 08:43:45 +0000 (10:43 +0200)]
add Serializable to export transformers
Andreas Müller [Tue, 5 Sep 2023 08:38:27 +0000 (10:38 +0200)]
cleanup
Katja Luther [Mon, 4 Sep 2023 08:40:30 +0000 (10:40 +0200)]
ref #10271: Transfomer needs to be serializable
Andreas Müller [Fri, 1 Sep 2023 20:27:17 +0000 (22:27 +0200)]
ref #10133 add size state tree to ontology
Katja Luther [Thu, 31 Aug 2023 14:27:25 +0000 (16:27 +0200)]
ref #10389: correct handling for quantitative data with several values
Andreas Müller [Wed, 30 Aug 2023 16:18:18 +0000 (18:18 +0200)]
ref #10133 fix ontology uuids for fusion and width
Andreas Müller [Tue, 29 Aug 2023 14:20:13 +0000 (16:20 +0200)]
fix #10385 add transliteration field to common names
Andreas Müller [Tue, 29 Aug 2023 11:35:08 +0000 (13:35 +0200)]
cleanup
Katja Luther [Mon, 28 Aug 2023 08:10:04 +0000 (10:10 +0200)]
fix failing tests because of BiNHum biocase provider, using herbar as
provider