Patrick Plitzner [Fri, 12 Jan 2018 07:20:07 +0000 (08:20 +0100)]
fix #7165, #7166 Add singleton constructor for rank
- remove unused methods
Patrick Plitzner [Fri, 12 Jan 2018 07:08:51 +0000 (08:08 +0100)]
fix #7166 Implement area filter for TaxonNodeFilter
Patrick Plitzner [Fri, 12 Jan 2018 05:33:54 +0000 (06:33 +0100)]
ref #7165 Fix potential NPE
Patrick Plitzner [Thu, 11 Jan 2018 13:45:39 +0000 (14:45 +0100)]
ref #7165 Add rank filter to TaxonNodeFilter
- Added JUnit test
Patrick Plitzner [Thu, 11 Jan 2018 11:20:13 +0000 (12:20 +0100)]
Fix typo
Katja Luther [Thu, 11 Jan 2018 11:01:00 +0000 (12:01 +0100)]
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Katja Luther [Thu, 11 Jan 2018 11:00:28 +0000 (12:00 +0100)]
add possibility to move more than one taxon as synonym to another taxon
unknown [Mon, 8 Jan 2018 11:31:17 +0000 (12:31 +0100)]
Fix doc of isPartial
Katja Luther [Mon, 8 Jan 2018 08:23:41 +0000 (09:23 +0100)]
add proparte synonym information to csv light export
unknown [Fri, 5 Jan 2018 13:21:18 +0000 (14:21 +0100)]
ref #7094 revert remove space between initials and name in nomencl. person title as default
Katja Luther [Fri, 5 Jan 2018 09:52:59 +0000 (10:52 +0100)]
Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
Katja Luther [Fri, 5 Jan 2018 09:52:22 +0000 (10:52 +0100)]
IntextReference getClass needs to be public
unknown [Fri, 5 Jan 2018 09:20:43 +0000 (10:20 +0100)]
cleanup
unknown [Fri, 5 Jan 2018 09:18:02 +0000 (10:18 +0100)]
ref #6965 revert remove space between initials and name in nomencl. person title as default
unknown [Fri, 5 Jan 2018 09:17:20 +0000 (10:17 +0100)]
cleanup
Andreas Kohlbecker [Fri, 22 Dec 2017 15:12:37 +0000 (16:12 +0100)]
lowering loglevels
Andreas Kohlbecker [Fri, 22 Dec 2017 14:57:27 +0000 (15:57 +0100)]
ref #7150 implementing CollectionVoter and adding new default PermissionGroup 'EditorExtendedCreate'
Andreas Kohlbecker [Thu, 21 Dec 2017 09:41:58 +0000 (10:41 +0100)]
ref #6867 extending the CdmPermissionClass enum and CdmAuthority support for sets
Andreas Kohlbecker [Wed, 20 Dec 2017 14:15:06 +0000 (15:15 +0100)]
note on prospective better solution for implementing the hibernate integrator for the cdmlib
Katja Luther [Tue, 19 Dec 2017 14:52:04 +0000 (15:52 +0100)]
ref #7121: when no vocabulary is chosen, all vocabularies are searched in NamedAreaSelection
Andreas Kohlbecker [Mon, 18 Dec 2017 15:19:18 +0000 (16:19 +0100)]
ref #7114 fixing bug in DerivedUnitConverterIntegrationTest and NPE in DerivedUnitConverter
Andreas Kohlbecker [Mon, 18 Dec 2017 14:22:47 +0000 (15:22 +0100)]
ref #7114 fixing delete problems in DerivedUnitConverter and adding according test
Andreas Kohlbecker [Mon, 18 Dec 2017 10:56:23 +0000 (11:56 +0100)]
ref #7114 fixing probelms of test in suite (relates also to ref #7138)
Andreas Kohlbecker [Mon, 18 Dec 2017 10:54:11 +0000 (11:54 +0100)]
ref #7105 logging the calls to factory.openSession() as error
Katja Luther [Mon, 18 Dec 2017 10:54:39 +0000 (11:54 +0100)]
fix NPE in cloneClassification
Andreas Kohlbecker [Fri, 15 Dec 2017 13:48:51 +0000 (14:48 +0100)]
removing debug output
Andreas Kohlbecker [Fri, 15 Dec 2017 13:48:27 +0000 (14:48 +0100)]
updating comment to now refer to CdmRepository
Andreas Kohlbecker [Fri, 15 Dec 2017 13:47:55 +0000 (14:47 +0100)]
ignoring DerivedUnitConverterIntegrationTest instead of DerivedUnitConverterTest
Andreas Müller [Fri, 15 Dec 2017 13:27:17 +0000 (14:27 +0100)]
fix IdentifiableServiceBaseTest
Andreas Müller [Fri, 15 Dec 2017 13:19:11 +0000 (14:19 +0100)]
fix NumberFormatException in RegistrationIdentifierMinter
Katja Luther [Fri, 15 Dec 2017 13:04:53 +0000 (14:04 +0100)]
set failing tests to ignore to build cdmlib
Katja Luther [Fri, 15 Dec 2017 12:12:35 +0000 (13:12 +0100)]
implement possibility to get cdmEntities by identifiers in dialogs
Andreas Müller [Fri, 15 Dec 2017 10:19:50 +0000 (11:19 +0100)]
cleanup
Andreas Kohlbecker [Thu, 14 Dec 2017 19:32:14 +0000 (20:32 +0100)]
ref #7114 DerivedUnitConverter now deletes convertion sources:
- DerivedUnitConverterFactory intoduced
- DerivedUnitConverterFactory as spring bean in all appcontexts
- tests adapted
Andreas Kohlbecker [Thu, 14 Dec 2017 15:26:25 +0000 (16:26 +0100)]
fixing java doc
Andreas Kohlbecker [Thu, 14 Dec 2017 15:26:12 +0000 (16:26 +0100)]
ref #7114 implementing test to reproduce the issue
Andreas Kohlbecker [Thu, 14 Dec 2017 14:15:45 +0000 (15:15 +0100)]
ref #6361 removing TaxonName.DTYPE and Reference.DTYPE
- changing dbscripts/001-cdm.h2.sql
- adapting test data sets
Andreas Kohlbecker [Thu, 14 Dec 2017 11:18:06 +0000 (12:18 +0100)]
bean loading priority
Andreas Kohlbecker [Thu, 14 Dec 2017 11:17:47 +0000 (12:17 +0100)]
allowing to override property files for test environments
Andreas Kohlbecker [Wed, 13 Dec 2017 16:41:15 +0000 (17:41 +0100)]
data source bean id aka instance name now available from the Spring environment
Andreas Kohlbecker [Wed, 13 Dec 2017 16:39:47 +0000 (17:39 +0100)]
ref #7137 improvements to the RegistrationIdentifierMinter:
- addin getters
- logging a warning when configuration incomplete
Andreas Kohlbecker [Wed, 13 Dec 2017 14:15:03 +0000 (15:15 +0100)]
ref #7137 RegistrationIdentifierMinter implemented
Patrick Plitzner [Fri, 8 Dec 2017 14:55:25 +0000 (15:55 +0100)]
Do not add null to feature set
Andreas Kohlbecker [Fri, 8 Dec 2017 14:41:19 +0000 (15:41 +0100)]
ref #7130 enhancing filter capabilities of RegistrationService
- extending Restrictions by support for property paths
Andreas Kohlbecker [Thu, 7 Dec 2017 15:38:17 +0000 (16:38 +0100)]
configuring antrunner in lifecycle-mapping
Katja Luther [Thu, 7 Dec 2017 11:03:19 +0000 (12:03 +0100)]
ref #7078: add uuidAndTitleCacheComparator to sort by rank and name
Katja Luther [Thu, 7 Dec 2017 08:56:13 +0000 (09:56 +0100)]
fix #7077: when delete a typeDesignation, remove it from registration
jenkins [Tue, 5 Dec 2017 15:07:31 +0000 (16:07 +0100)]
Updating develop poms back to pre merge state
jenkins [Tue, 5 Dec 2017 15:07:30 +0000 (16:07 +0100)]
Merge branch 'master' into develop
jenkins [Tue, 5 Dec 2017 15:07:29 +0000 (16:07 +0100)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Tue, 5 Dec 2017 15:07:25 +0000 (16:07 +0100)]
Merge branch 'release/4.12.0'
jenkins [Tue, 5 Dec 2017 14:50:24 +0000 (15:50 +0100)]
updating poms for branch'release/4.12.0' with non-snapshot versions
jenkins [Tue, 5 Dec 2017 14:18:29 +0000 (15:18 +0100)]
updating poms for 4.13.0-SNAPSHOT development
Katja Luther [Tue, 5 Dec 2017 13:20:20 +0000 (14:20 +0100)]
fix getUuidAndTitleCache for *
Katja Luther [Tue, 5 Dec 2017 12:39:24 +0000 (13:39 +0100)]
fix problem when reusing name for new taxon
Andreas Müller [Tue, 5 Dec 2017 10:46:52 +0000 (11:46 +0100)]
undo unwanted changes
Andreas Müller [Tue, 5 Dec 2017 10:45:29 +0000 (11:45 +0100)]
fix compile issue in CdmPermissionEvaluator
Andreas Müller [Tue, 5 Dec 2017 10:40:59 +0000 (11:40 +0100)]
ref #7109 fix tests for nom. valid
Andreas Müller [Tue, 5 Dec 2017 10:04:48 +0000 (11:04 +0100)]
#7109 rename abbrev label from nom. valid to nom. val.
Andreas Müller [Tue, 5 Dec 2017 10:03:14 +0000 (11:03 +0100)]
cleanup
Andreas Kohlbecker [Mon, 4 Dec 2017 15:07:33 +0000 (16:07 +0100)]
disabling most mapping in lifecycle-mapping-metadata.xml since some are obsoltete and others are causing probelms with resoures
Katja Luther [Mon, 4 Dec 2017 14:03:20 +0000 (15:03 +0100)]
adapt all tests to updated test data
Katja Luther [Mon, 4 Dec 2017 13:44:09 +0000 (14:44 +0100)]
fix delete and tests of specimen with typedesignations and gathering events
Katja Luther [Mon, 4 Dec 2017 09:42:21 +0000 (10:42 +0100)]
titleCache of the taxon is not updated when swap synonym and accepted taxon
Katja Luther [Thu, 30 Nov 2017 10:52:46 +0000 (11:52 +0100)]
adapt uuidAndTitleCache services and dao methods to search for a pattern
Andreas Müller [Fri, 24 Nov 2017 16:36:09 +0000 (17:36 +0100)]
cleanup
Andreas Müller [Fri, 24 Nov 2017 16:35:43 +0000 (17:35 +0100)]
fix #7094 fix tests after removing whitespaces from nomenclatural titles of persons
Andreas Müller [Thu, 23 Nov 2017 21:26:54 +0000 (22:26 +0100)]
reset MediaUtils (was accidentally commited)
Andreas Müller [Thu, 23 Nov 2017 21:19:46 +0000 (22:19 +0100)]
ref #6965 remove space between initials and name in nomencl. person title
Andreas Müller [Thu, 23 Nov 2017 21:18:53 +0000 (22:18 +0100)]
ref #6965 add reference author handling and and reporting for ID duplicates
Andreas Kohlbecker [Thu, 23 Nov 2017 12:16:32 +0000 (13:16 +0100)]
avoiding NPE in SpecimenOrObservationBaseVoter in case originals is null
Andreas Kohlbecker [Wed, 22 Nov 2017 15:45:47 +0000 (16:45 +0100)]
Creating spring bean DataBaseTablePrinter responsible for all database printing tasks, CdmIntegrationTest only wraps around this bean now
Katja Luther [Wed, 22 Nov 2017 12:28:16 +0000 (13:28 +0100)]
fix delete of derivedUnits, derivationEvent needs to be deleted, add getUUIDAndTitleCache with pattern and limit
Andreas Müller [Tue, 21 Nov 2017 11:44:42 +0000 (12:44 +0100)]
ref #6965 fix compilation issue in ImportDeduplicationHelper
Andreas Müller [Tue, 21 Nov 2017 11:36:48 +0000 (12:36 +0100)]
ref #6258 add cascading for registration in TaxonName and TypeDesignationBase
Andreas Müller [Tue, 21 Nov 2017 11:28:04 +0000 (12:28 +0100)]
cleanup
Andreas Müller [Tue, 21 Nov 2017 11:27:52 +0000 (12:27 +0100)]
ref #6965 fix TropicosNameImportTest
Andreas Müller [Tue, 21 Nov 2017 09:42:44 +0000 (10:42 +0100)]
ref #6965 fix empty TimePeriod matching bug
Andreas Müller [Tue, 21 Nov 2017 09:41:54 +0000 (10:41 +0100)]
ref #6965 first version of Tropicos import
Andreas Müller [Tue, 21 Nov 2017 09:31:31 +0000 (10:31 +0100)]
cleanup
Andreas Müller [Tue, 21 Nov 2017 09:27:59 +0000 (10:27 +0100)]
ref #6965 rename static Name Identifier methods
Andreas Müller [Tue, 21 Nov 2017 09:25:22 +0000 (10:25 +0100)]
ref #6965 move CsvImportBase to "in" package
Katja Luther [Wed, 15 Nov 2017 08:57:37 +0000 (09:57 +0100)]
add level to titleCache of namedArea in uuidAndTitleCache search
Katja Luther [Tue, 14 Nov 2017 12:37:56 +0000 (13:37 +0100)]
add uuidAndTitleCache method to get uuidAndTitleCache of namedArea depending on vocabulary
Andreas Kohlbecker [Tue, 14 Nov 2017 11:31:23 +0000 (12:31 +0100)]
typos and whitespace
Andreas Kohlbecker [Tue, 14 Nov 2017 11:30:53 +0000 (12:30 +0100)]
fixing NPE in IdentifiableEntity.getExtensions()
Andreas Kohlbecker [Tue, 14 Nov 2017 11:30:11 +0000 (12:30 +0100)]
handing hibernate proxies
Andreas Müller [Sun, 12 Nov 2017 07:27:00 +0000 (08:27 +0100)]
move stream base classes from dwca to stream package (test package)
Andreas Müller [Sat, 11 Nov 2017 23:28:04 +0000 (00:28 +0100)]
cleanup
Andreas Müller [Sat, 11 Nov 2017 23:27:50 +0000 (00:27 +0100)]
move stream base classes from dwca to stream package
Andreas Müller [Sat, 11 Nov 2017 21:22:57 +0000 (22:22 +0100)]
remove reference deduplication as default from Excel import
Andreas Müller [Sat, 11 Nov 2017 21:22:16 +0000 (22:22 +0100)]
cleanup
Andreas Müller [Sat, 11 Nov 2017 21:20:22 +0000 (22:20 +0100)]
ref #7075 first running version for ImageExcelImport
Andreas Müller [Sat, 11 Nov 2017 21:18:01 +0000 (22:18 +0100)]
ref #7075 add slash dates to TimePeriodParser
Andreas Müller [Sun, 5 Nov 2017 17:55:16 +0000 (18:55 +0100)]
cleanup
jenkins [Wed, 8 Nov 2017 11:16:07 +0000 (12:16 +0100)]
Updating develop poms back to pre merge state
jenkins [Wed, 8 Nov 2017 11:16:07 +0000 (12:16 +0100)]
Merge branch 'master' into develop
jenkins [Wed, 8 Nov 2017 11:16:06 +0000 (12:16 +0100)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Wed, 8 Nov 2017 11:16:03 +0000 (12:16 +0100)]
Merge branch 'release/4.11.0'
jenkins [Wed, 8 Nov 2017 10:57:17 +0000 (11:57 +0100)]
updating poms for branch'release/4.11.0' with non-snapshot versions