cdmlib.git
9 years agotypos
Andreas Müller [Wed, 10 Sep 2014 10:35:51 +0000 (10:35 +0000)]
typos

9 years ago - temporarily disabled test
Patric Plitzner [Tue, 9 Sep 2014 13:44:28 +0000 (13:44 +0000)]
 - temporarily disabled test

9 years ago - used utility method for modifier
Patric Plitzner [Tue, 9 Sep 2014 12:41:55 +0000 (12:41 +0000)]
 - used utility method for modifier

9 years agomerge-update from trunk; added import preference to add media as media specimen
Patric Plitzner [Tue, 9 Sep 2014 11:23:19 +0000 (11:23 +0000)]
merge-update from trunk; added import preference to add media as media specimen

9 years ago - replaced save() with saveOrUpdate()
Patric Plitzner [Tue, 9 Sep 2014 11:07:57 +0000 (11:07 +0000)]
 - replaced save() with saveOrUpdate()

9 years ago - adpated test to model changes (cascading)
Patric Plitzner [Tue, 9 Sep 2014 10:03:25 +0000 (10:03 +0000)]
 - adpated test to model changes (cascading)

9 years ago - added cascading to setOfReferences in DeterminationEvent
Patric Plitzner [Tue, 9 Sep 2014 10:02:21 +0000 (10:02 +0000)]
 - added cascading to setOfReferences in DeterminationEvent

9 years ago - changed from MySql to H2
Patric Plitzner [Tue, 9 Sep 2014 07:47:17 +0000 (07:47 +0000)]
 - changed from MySql to H2

9 years ago - added test for saving non-cascaded CDM entities
Patric Plitzner [Tue, 9 Sep 2014 07:02:30 +0000 (07:02 +0000)]
 - added test for saving non-cascaded CDM entities

9 years ago - fixed possible NPE
Patric Plitzner [Mon, 8 Sep 2014 13:01:43 +0000 (13:01 +0000)]
 - fixed possible NPE

9 years ago - adapted some save method to allow transient services (#3726)
Patric Plitzner [Mon, 8 Sep 2014 12:10:19 +0000 (12:10 +0000)]
 - adapted some save method to allow transient services (#3726)

9 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Thu, 4 Sep 2014 14:38:44 +0000 (14:38 +0000)]
[maven-release-plugin] prepare for next development iteration

9 years ago[maven-release-plugin] prepare release cdmlib-parent-3.3.7 root/tags/cdmlib/cdmlib-parent-3.3.7 cdmlib-parent-3.3.7
edit-jenkins [Thu, 4 Sep 2014 14:38:41 +0000 (14:38 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.7

9 years agoadded FEATURE_STORE to be compliant with XML-IMPORT for cdmlib-app
Alexander Oppermann [Thu, 4 Sep 2014 09:49:35 +0000 (09:49 +0000)]
added FEATURE_STORE to be compliant with XML-IMPORT for cdmlib-app

9 years agoreverting hack related to #4368 (caching api causes bug in Rank.getAbbreviation())
Andreas Kohlbecker [Thu, 4 Sep 2014 09:39:38 +0000 (09:39 +0000)]
reverting hack related to #4368 (caching api causes bug in Rank.getAbbreviation())

9 years agoupdating TODO
Andreas Kohlbecker [Thu, 4 Sep 2014 09:39:35 +0000 (09:39 +0000)]
updating TODO

9 years agoadded check for null cdm entity when putting default terms in cache
Cherian Mathew [Thu, 4 Sep 2014 08:33:24 +0000 (08:33 +0000)]
added check for null cdm entity when putting default terms in cache

9 years agoadded possiblity to initialise some specific terms (like default language) which...
Cherian Mathew [Wed, 3 Sep 2014 16:34:49 +0000 (16:34 +0000)]
added possiblity to initialise some specific terms (like default language) which could be called outside a session

9 years agosome generics
Andreas Müller [Tue, 2 Sep 2014 14:54:42 +0000 (14:54 +0000)]
some generics

9 years agominor
Andreas Müller [Tue, 2 Sep 2014 14:51:55 +0000 (14:51 +0000)]
minor

9 years agoadd identifiers to hibernate.cfg
Andreas Müller [Tue, 2 Sep 2014 14:22:56 +0000 (14:22 +0000)]
add identifiers to hibernate.cfg

9 years ago - fixed parsing of elevation in GBIF response
Patric Plitzner [Mon, 1 Sep 2014 13:46:33 +0000 (13:46 +0000)]
 - fixed parsing of elevation in GBIF response

9 years agorefactoring taxon controllers, reducing code duplication
Andreas Kohlbecker [Tue, 26 Aug 2014 10:16:57 +0000 (10:16 +0000)]
refactoring taxon controllers, reducing code duplication

9 years agomerge-update from trunk
Patric Plitzner [Tue, 26 Aug 2014 09:57:15 +0000 (09:57 +0000)]
merge-update from trunk

9 years ago - commented model changes for alternatve identifiers due to exceptions when connecti...
Patric Plitzner [Mon, 25 Aug 2014 12:48:00 +0000 (12:48 +0000)]
 - commented model changes for alternatve identifiers due to exceptions when connecting to data base #4275

9 years agomerge-update from trunk
Patric Plitzner [Mon, 25 Aug 2014 11:53:17 +0000 (11:53 +0000)]
merge-update from trunk

9 years agofixing prefer specific distributions for #3904 (EuroMed: Implement filtering rules...
Andreas Kohlbecker [Fri, 22 Aug 2014 12:50:08 +0000 (12:50 +0000)]
fixing prefer specific distributions for  #3904 (EuroMed: Implement filtering rules for Distributions), status=null was ereoneously preferred

9 years agosolving #4294 (order of map legend entries conforms to term order)
Andreas Kohlbecker [Fri, 22 Aug 2014 11:26:44 +0000 (11:26 +0000)]
solving  #4294 (order of map legend entries conforms to term order)

9 years agofirst attempt to fix #4294 (order of map legend entries conforms to term order)
Andreas Kohlbecker [Fri, 22 Aug 2014 11:23:09 +0000 (11:23 +0000)]
first attempt to fix #4294 (order of map legend entries conforms to term order)

9 years agoadding @Transient to new API methods introduced for #3327 (better API for OrderedTerm...
Andreas Kohlbecker [Fri, 22 Aug 2014 11:20:56 +0000 (11:20 +0000)]
adding @Transient to new API methods introduced for #3327 (better API for OrderedTermBase and OrderedTermVocabulary)

9 years agominor
Andreas Müller [Thu, 21 Aug 2014 18:08:10 +0000 (18:08 +0000)]
minor

9 years agominor
Andreas Müller [Thu, 21 Aug 2014 18:03:47 +0000 (18:03 +0000)]
minor

9 years agoremove potential NPE in CdmDataSourceBase
Andreas Müller [Thu, 21 Aug 2014 17:54:53 +0000 (17:54 +0000)]
remove potential NPE in CdmDataSourceBase

9 years agofix the test
Katja Luther [Thu, 21 Aug 2014 12:23:10 +0000 (12:23 +0000)]
fix the test

9 years agoisDeletable ignores relations of identifiableEntity
Katja Luther [Thu, 21 Aug 2014 10:45:23 +0000 (10:45 +0000)]
isDeletable ignores relations of identifiableEntity

9 years ago - generalized simple user interface to add media (#3339)
Patric Plitzner [Thu, 21 Aug 2014 07:52:52 +0000 (07:52 +0000)]
 - generalized simple user interface to add media (#3339)

9 years ago(no commit message)
Katja Luther [Wed, 20 Aug 2014 12:58:30 +0000 (12:58 +0000)]

9 years ago - assured image order for images from image galleries #3242
Patric Plitzner [Wed, 20 Aug 2014 07:17:05 +0000 (07:17 +0000)]
 - assured image order for images from image galleries #3242

9 years ago - changed HashMap to LinkedHashMap to keep order of insertion
Patric Plitzner [Tue, 19 Aug 2014 15:14:47 +0000 (15:14 +0000)]
 - changed HashMap to LinkedHashMap to keep order of insertion
 - this should fix #3242

9 years agofirst implementation of alternative identifier #4275
Andreas Müller [Tue, 19 Aug 2014 14:54:44 +0000 (14:54 +0000)]
first implementation of alternative identifier #4275

9 years agoremove old and misleading titleCache length
Andreas Müller [Tue, 19 Aug 2014 14:35:39 +0000 (14:35 +0000)]
remove old and misleading titleCache length

9 years agominor
Andreas Müller [Tue, 19 Aug 2014 14:27:06 +0000 (14:27 +0000)]
minor

9 years agoremove TODO
Andreas Müller [Tue, 19 Aug 2014 14:26:15 +0000 (14:26 +0000)]
remove TODO

9 years agomerge-update from trunk
Patric Plitzner [Tue, 19 Aug 2014 13:32:26 +0000 (13:32 +0000)]
merge-update from trunk

9 years agomerge-update from trunk
Patric Plitzner [Tue, 19 Aug 2014 13:32:10 +0000 (13:32 +0000)]
merge-update from trunk

9 years agoupdating team
Andreas Kohlbecker [Tue, 19 Aug 2014 12:11:12 +0000 (12:11 +0000)]
updating team

9 years agofix jenkins
Katja Luther [Tue, 19 Aug 2014 08:01:39 +0000 (08:01 +0000)]
fix jenkins

9 years ago(no commit message)
Katja Luther [Mon, 18 Aug 2014 20:31:43 +0000 (20:31 +0000)]

9 years ago(no commit message)
Katja Luther [Mon, 18 Aug 2014 20:01:55 +0000 (20:01 +0000)]

9 years agoadd vol to generic infereference formatting
Andreas Müller [Mon, 18 Aug 2014 14:58:27 +0000 (14:58 +0000)]
add vol to generic infereference formatting

9 years ago(no commit message)
Katja Luther [Mon, 18 Aug 2014 07:58:55 +0000 (07:58 +0000)]

9 years ago - changed initialization of CDM entities
Patric Plitzner [Wed, 13 Aug 2014 14:11:39 +0000 (14:11 +0000)]
 - changed initialization of CDM entities
 - fixed typo

9 years ago - replaced using the dao with using the service for taxa
Patric Plitzner [Wed, 13 Aug 2014 14:11:00 +0000 (14:11 +0000)]
 - replaced using the dao with using the service for taxa

9 years ago - fixed typo
Patric Plitzner [Wed, 13 Aug 2014 14:08:47 +0000 (14:08 +0000)]
 - fixed typo

9 years agomerge-update from trunk
Patric Plitzner [Wed, 13 Aug 2014 09:25:39 +0000 (09:25 +0000)]
merge-update from trunk

9 years ago - finished DerivateHierarchyDTO citation
Patric Plitzner [Wed, 13 Aug 2014 09:21:46 +0000 (09:21 +0000)]
 - finished DerivateHierarchyDTO citation

9 years agoisAncestor() using treeIndex
Katja Luther [Tue, 12 Aug 2014 08:33:04 +0000 (08:33 +0000)]
isAncestor() using treeIndex

9 years agogitignore
Andreas Kohlbecker [Mon, 11 Aug 2014 13:28:58 +0000 (13:28 +0000)]
gitignore

9 years agomissing update
Andreas Müller [Mon, 11 Aug 2014 13:15:35 +0000 (13:15 +0000)]
missing update

9 years agobetter handling of abbreviated title cache in references, series -> seriesPart and...
Andreas Müller [Mon, 11 Aug 2014 13:03:12 +0000 (13:03 +0000)]
better handling of abbreviated title cache in references, series -> seriesPart and some improvements in the reference cache strategies #4280, #4239  , changes in tests

9 years agobetter handling of abbreviated title cache in references, series -> seriesPart and...
Andreas Müller [Mon, 11 Aug 2014 12:56:59 +0000 (12:56 +0000)]
better handling of abbreviated title cache in references, series -> seriesPart and some improvements in the reference cache strategies #4280, #4239

9 years agomerge-update from trunk
Patric Plitzner [Mon, 11 Aug 2014 12:22:13 +0000 (12:22 +0000)]
merge-update from trunk

9 years ago - restructured derivate hierarchy query
Patric Plitzner [Mon, 11 Aug 2014 12:16:01 +0000 (12:16 +0000)]
 - restructured derivate hierarchy query
   - step 1: get associated field units for a taxon (taxon service)
   - step 2: assemble derivate hierarchy for each field unit (occurrence service)

9 years ago - added timeout and null check
Patric Plitzner [Mon, 11 Aug 2014 11:43:56 +0000 (11:43 +0000)]
 - added timeout and null check

9 years agoFormatting for aggregates with Authors (E+M exception)
Andreas Müller [Fri, 8 Aug 2014 14:46:58 +0000 (14:46 +0000)]
Formatting for aggregates with Authors (E+M exception)

9 years agoChange authorTeam types in NonViralName from INomenclaturalAuthor to TeamOrPersonBase...
Andreas Müller [Fri, 8 Aug 2014 13:54:37 +0000 (13:54 +0000)]
Change authorTeam types in NonViralName from INomenclaturalAuthor to TeamOrPersonBase  #1489

9 years agoreverting test for #686 (orderindex of rank undefined) to ist original version and...
Andreas Kohlbecker [Fri, 8 Aug 2014 13:12:48 +0000 (13:12 +0000)]
reverting test for #686 (orderindex of rank undefined) to ist original version and removing ignore since the bug is fixed now

9 years agothrowing exception in case vocabulary is not found
Andreas Kohlbecker [Fri, 8 Aug 2014 13:12:42 +0000 (13:12 +0000)]
throwing exception in case vocabulary is not found

9 years agominor
Andreas Müller [Thu, 7 Aug 2014 17:38:58 +0000 (17:38 +0000)]
minor

9 years agoremoving old ignore and FIXME #530
Andreas Müller [Thu, 7 Aug 2014 17:28:31 +0000 (17:28 +0000)]
removing old ignore and FIXME  #530

9 years agoupdate abbrevTitleCache in bulk update (Cont.)
Andreas Müller [Thu, 7 Aug 2014 17:16:16 +0000 (17:16 +0000)]
update abbrevTitleCache in bulk update (Cont.)

9 years agoupdate abbrevTitleCache in bulk update
Andreas Müller [Thu, 7 Aug 2014 17:15:06 +0000 (17:15 +0000)]
update abbrevTitleCache in bulk update

9 years agoremove function tests which don't compile
Andreas Müller [Thu, 7 Aug 2014 16:46:17 +0000 (16:46 +0000)]
remove function tests which don't compile

9 years agogenerics
Andreas Müller [Thu, 7 Aug 2014 16:42:53 +0000 (16:42 +0000)]
generics

9 years agoremove deprecated name service getVocabulary methods
Andreas Müller [Thu, 7 Aug 2014 16:40:29 +0000 (16:40 +0000)]
remove deprecated name service getVocabulary methods

9 years agominor
Andreas Müller [Thu, 7 Aug 2014 16:31:10 +0000 (16:31 +0000)]
minor

9 years agoimplement getNextHigherTerm and getNextLowerTerm #3327
Andreas Müller [Thu, 7 Aug 2014 16:27:21 +0000 (16:27 +0000)]
implement getNextHigherTerm and getNextLowerTerm  #3327

9 years agomove vocabulary tests to vocabulary service and fix @Ignore, remove deprecated method...
Andreas Müller [Thu, 7 Aug 2014 16:25:33 +0000 (16:25 +0000)]
move vocabulary tests to vocabulary service and fix @Ignore, remove deprecated methods from INameService

9 years agominor
Andreas Müller [Thu, 7 Aug 2014 15:44:25 +0000 (15:44 +0000)]
minor

9 years agominor
Andreas Müller [Thu, 7 Aug 2014 15:38:09 +0000 (15:38 +0000)]
minor

9 years agocleaning up CdmBase
Andreas Müller [Thu, 7 Aug 2014 15:32:38 +0000 (15:32 +0000)]
cleaning up CdmBase

9 years agoadded check for non-null operation in constructors
Cherian Mathew [Thu, 7 Aug 2014 11:57:46 +0000 (11:57 +0000)]
added check for non-null operation in constructors

9 years agomoved ehcache-core version to parent pom
Cherian Mathew [Thu, 7 Aug 2014 09:33:23 +0000 (09:33 +0000)]
moved ehcache-core version to parent pom

9 years agomaking sure operation is always initialised
Cherian Mathew [Thu, 7 Aug 2014 09:08:39 +0000 (09:08 +0000)]
making sure operation is always initialised

9 years agoupdated doc
Cherian Mathew [Thu, 7 Aug 2014 09:07:48 +0000 (09:07 +0000)]
updated doc

9 years agomoved ehcache-core version to root pom
Cherian Mathew [Thu, 7 Aug 2014 09:06:44 +0000 (09:06 +0000)]
moved ehcache-core version to root pom

9 years agomerge-update from trunk
Patric Plitzner [Wed, 6 Aug 2014 07:20:03 +0000 (07:20 +0000)]
merge-update from trunk

9 years ago - added type information to DTO
Patric Plitzner [Wed, 6 Aug 2014 06:54:46 +0000 (06:54 +0000)]
 - added type information to DTO
 - enhanced media labeling

9 years ago - enhanced DerivateHierarchyDTO data
Patric Plitzner [Tue, 5 Aug 2014 14:14:15 +0000 (14:14 +0000)]
  - enhanced DerivateHierarchyDTO data

9 years agomerge-update from trunk
Patric Plitzner [Tue, 5 Aug 2014 09:17:23 +0000 (09:17 +0000)]
merge-update from trunk

9 years ago - extended dto assembly
Patric Plitzner [Tue, 5 Aug 2014 08:15:25 +0000 (08:15 +0000)]
 - extended dto assembly

9 years ago - cleaned code
Patric Plitzner [Tue, 5 Aug 2014 08:14:59 +0000 (08:14 +0000)]
 - cleaned code

9 years agoreverting erroneously committed experimental branch (swagger)
Andreas Kohlbecker [Tue, 5 Aug 2014 05:34:17 +0000 (05:34 +0000)]
reverting erroneously committed experimental branch (swagger)

10 years agoignoring joda time partial from json serialization for swagger model scanner
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:29 +0000 (16:26 +0000)]
ignoring joda time partial from json serialization for swagger model scanner

10 years agoadding swagger-ui
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:25 +0000 (16:26 +0000)]
adding swagger-ui

10 years agoworking configuration of java based spring mvc config for swagger
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:13 +0000 (16:26 +0000)]
working configuration of java based spring mvc config for swagger

10 years agoimplementing CdmTypeScanner and test
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:11 +0000 (16:26 +0000)]
implementing CdmTypeScanner and test

10 years agoadding dependencies for swagger
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:07 +0000 (16:26 +0000)]
adding dependencies for swagger

10 years agoignoring ide or maven project files
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:05 +0000 (16:26 +0000)]
ignoring ide or maven project files

10 years agoignoring ide or maven project files
Andreas Kohlbecker [Mon, 4 Aug 2014 16:26:03 +0000 (16:26 +0000)]
ignoring ide or maven project files