Andreas Müller [Mon, 13 May 2013 16:19:15 +0000 (16:19 +0000)]
minor
Andreas Kohlbecker [Fri, 10 May 2013 12:17:48 +0000 (12:17 +0000)]
fixing bug in filterDistributions()
Andreas Kohlbecker [Wed, 8 May 2013 14:40:39 +0000 (14:40 +0000)]
using uuid instead of id as key - fixes broken test
s.buers [Wed, 8 May 2013 13:59:09 +0000 (13:59 +0000)]
fixed the parent link in taxotree to internal
Andreas Kohlbecker [Wed, 8 May 2013 11:35:55 +0000 (11:35 +0000)]
filtering of distributions for publication fixed ()
Andreas Kohlbecker [Wed, 8 May 2013 11:35:52 +0000 (11:35 +0000)]
renaming eclipse launchers
s.buers [Wed, 8 May 2013 10:24:27 +0000 (10:24 +0000)]
changed wiki template names
l.morris [Wed, 8 May 2013 10:18:57 +0000 (10:18 +0000)]
Updated reference template
s.buers [Tue, 7 May 2013 14:09:41 +0000 (14:09 +0000)]
italic and bold wiki templates are abandoned now, list in features are now delimited correctly
s.buers [Tue, 7 May 2013 09:11:05 +0000 (09:11 +0000)]
pages are created internal now
Andreas Kohlbecker [Tue, 7 May 2013 09:02:46 +0000 (09:02 +0000)]
fixing stack overflow due to incorrect usage of freetext sessions
Andreas Müller [Mon, 6 May 2013 21:41:50 +0000 (21:41 +0000)]
minor
Andreas Müller [Mon, 6 May 2013 20:04:02 +0000 (20:04 +0000)]
change behaviour for DistributionTree equals if no area levels exist.
Andreas Müller [Mon, 6 May 2013 19:48:33 +0000 (19:48 +0000)]
fix NPE in Distribution Tree building (#3376)
Andreas Müller [Mon, 6 May 2013 18:43:21 +0000 (18:43 +0000)]
minor
Andreas Müller [Mon, 6 May 2013 18:42:19 +0000 (18:42 +0000)]
minor
Andreas Kohlbecker [Mon, 6 May 2013 16:11:34 +0000 (16:11 +0000)]
reducing batch size, reducing max memory consumption, batch processes now running with lower priority (=3)
Andreas Kohlbecker [Mon, 6 May 2013 16:11:33 +0000 (16:11 +0000)]
always updating priorities in transmission engine (avoids errors due to missing priorities)
Andreas Kohlbecker [Mon, 6 May 2013 16:11:32 +0000 (16:11 +0000)]
java doc added
Andreas Kohlbecker [Mon, 6 May 2013 15:35:57 +0000 (15:35 +0000)]
better error reporting
s.buers [Mon, 6 May 2013 12:41:55 +0000 (12:41 +0000)]
removing indetion after mediawiki import
s.buers [Mon, 6 May 2013 12:28:30 +0000 (12:28 +0000)]
it now works without automatic indention
Cherian Mathew [Fri, 3 May 2013 09:19:24 +0000 (09:19 +0000)]
reverted batch size back to 100
edit-jenkins [Thu, 2 May 2013 12:20:06 +0000 (12:20 +0000)]
[maven-release-plugin] prepare for next development iteration
edit-jenkins [Thu, 2 May 2013 12:20:02 +0000 (12:20 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.2.0
Andreas Müller [Tue, 30 Apr 2013 23:05:30 +0000 (23:05 +0000)]
created markup nomenclaturalImport and specimen import
Andreas Müller [Tue, 30 Apr 2013 17:07:21 +0000 (17:07 +0000)]
updates to the markup import
s.buers [Tue, 30 Apr 2013 15:49:47 +0000 (15:49 +0000)]
changed some template names
Andreas Müller [Tue, 30 Apr 2013 15:14:02 +0000 (15:14 +0000)]
latest markup updates
Cherian Mathew [Tue, 30 Apr 2013 14:15:18 +0000 (14:15 +0000)]
removed unused imports
s.buers [Tue, 30 Apr 2013 12:34:48 +0000 (12:34 +0000)]
changed all parameter names to lower case
Cherian Mathew [Tue, 30 Apr 2013 12:26:33 +0000 (12:26 +0000)]
corrected examples
Cherian Mathew [Tue, 30 Apr 2013 11:22:57 +0000 (11:22 +0000)]
NameCatalogueController : added endpoints for documentation
name-catalogue-accepted.apt : added type parameter to doc
Andreas Kohlbecker [Tue, 30 Apr 2013 10:02:42 +0000 (10:02 +0000)]
TransmissionEngineDistribution separating byArea and byRank aggregation - correcting progressmonitor work ticks
Andreas Kohlbecker [Tue, 30 Apr 2013 09:58:50 +0000 (09:58 +0000)]
TransmissionEngineDistribution separating byArea and byRank aggregation
Andreas Kohlbecker [Tue, 30 Apr 2013 09:58:43 +0000 (09:58 +0000)]
removing test code
Cherian Mathew [Tue, 30 Apr 2013 09:27:27 +0000 (09:27 +0000)]
corrected utl to new endpoints
Andreas Müller [Mon, 29 Apr 2013 23:08:59 +0000 (23:08 +0000)]
Markup import updates
Andreas Müller [Mon, 29 Apr 2013 21:45:55 +0000 (21:45 +0000)]
minor
s.buers [Mon, 29 Apr 2013 09:38:23 +0000 (09:38 +0000)]
fixed gallery problem
s.buers [Mon, 29 Apr 2013 09:29:40 +0000 (09:29 +0000)]
this file is imported in the multipage it provides some string parsing
functions
Andreas Müller [Sat, 27 Apr 2013 00:45:35 +0000 (00:45 +0000)]
New factory method for keyStatement
Andreas Müller [Sat, 27 Apr 2013 00:34:34 +0000 (00:34 +0000)]
toString() for KeyStatement
Andreas Müller [Sat, 27 Apr 2013 00:10:53 +0000 (00:10 +0000)]
documentation on polytomous key + node
Andreas Müller [Fri, 26 Apr 2013 23:58:02 +0000 (23:58 +0000)]
updating documentation for PolytomousKeyNode
Andreas Kohlbecker [Fri, 26 Apr 2013 21:18:42 +0000 (21:18 +0000)]
lucene search: fixing grouping problem and basic indexing of term hierachies
Andreas Kohlbecker [Fri, 26 Apr 2013 15:34:58 +0000 (15:34 +0000)]
reenabling some lines of code
Andreas Kohlbecker [Fri, 26 Apr 2013 15:34:55 +0000 (15:34 +0000)]
first working implementation of the Occurrence freetext search with spatial search
Andreas Kohlbecker [Fri, 26 Apr 2013 15:29:08 +0000 (15:29 +0000)]
using NumericField and spatial type for search field
Cherian Mathew [Fri, 26 Apr 2013 15:20:14 +0000 (15:20 +0000)]
name-catalogue-accepted : added apt doc for accepted name search endpoint
name-catalogue-fuzzy : added apt doc for fuzzy name search endpoint
name-catalogue-taxon : updated apt doc with source and taxonomic scrutiny info
rest-api-name-catalogue : added links to newly created apt docs
Cherian Mathew [Fri, 26 Apr 2013 15:18:09 +0000 (15:18 +0000)]
added boundary check on accuracy
l.morris [Thu, 25 Apr 2013 16:23:46 +0000 (16:23 +0000)]
Added template for creating Reference list from citation nodes and nomenclaturalReference nodes.
Cherian Mathew [Thu, 25 Apr 2013 15:07:47 +0000 (15:07 +0000)]
NameCatalogueController : added 'fuzzy' endpoint to perform fuzzy matching on names
NameSearch : updated NameSearch dto to include similarity score
Cherian Mathew [Thu, 25 Apr 2013 15:06:30 +0000 (15:06 +0000)]
added NONVIRALNAME to enum for fuzzy search
Cherian Mathew [Thu, 25 Apr 2013 15:05:29 +0000 (15:05 +0000)]
INameService : added findByNameFuzzySearch method to search names by fuzzy matching
NameServiceImpl : implemented findByNameFuzzySearch and helper methods
LuceneSearch : added new simple (TopDocs based) executeSearch method
ISearchResultBuilder : added createResultSet method for generating a result set for TopDocs
SearchResultBuilder : implmented createResultSet method
Cherian Mathew [Thu, 25 Apr 2013 14:54:25 +0000 (14:54 +0000)]
Added 'redict' endpoint to recreate dictionaries
Cherian Mathew [Thu, 25 Apr 2013 14:53:48 +0000 (14:53 +0000)]
Added Creation of dictionaries within the mass indexer
Andreas Kohlbecker [Thu, 25 Apr 2013 10:18:49 +0000 (10:18 +0000)]
minor
Andreas Müller [Thu, 25 Apr 2013 00:07:11 +0000 (00:07 +0000)]
make sessionFactory private
Andreas Müller [Thu, 25 Apr 2013 00:04:40 +0000 (00:04 +0000)]
minor
Andreas Müller [Wed, 24 Apr 2013 23:28:28 +0000 (23:28 +0000)]
minor
Andreas Kohlbecker [Wed, 24 Apr 2013 15:56:49 +0000 (15:56 +0000)]
also preferring computed distributions in getOrderedDistributions()
s.buers [Wed, 24 Apr 2013 14:45:19 +0000 (14:45 +0000)]
fixed the 'italic problem
Andreas Müller [Wed, 24 Apr 2013 13:39:44 +0000 (13:39 +0000)]
update ReferenceFactory method
Andreas Müller [Wed, 24 Apr 2013 13:29:53 +0000 (13:29 +0000)]
update ReferenceFactory method
Andreas Müller [Wed, 24 Apr 2013 12:40:24 +0000 (12:40 +0000)]
minor
Andreas Müller [Wed, 24 Apr 2013 12:38:13 +0000 (12:38 +0000)]
remove imports
s.buers [Wed, 24 Apr 2013 11:43:51 +0000 (11:43 +0000)]
gallery works with gallery parser function, but there could be some improvements, also i found the replacement of the italic tag seems not to work proper
Andreas Müller [Wed, 24 Apr 2013 11:42:26 +0000 (11:42 +0000)]
avoid duplicates in derived unit media list
Andreas Müller [Wed, 24 Apr 2013 11:40:00 +0000 (11:40 +0000)]
change method name
Andreas Müller [Wed, 24 Apr 2013 11:37:27 +0000 (11:37 +0000)]
minor
Andreas Kohlbecker [Wed, 24 Apr 2013 10:30:17 +0000 (10:30 +0000)]
adding missing logger
Andreas Müller [Tue, 23 Apr 2013 14:47:59 +0000 (14:47 +0000)]
update ReferenceFactory method, remove instantiation
Andreas Müller [Tue, 23 Apr 2013 14:44:56 +0000 (14:44 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:43:37 +0000 (14:43 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:42:18 +0000 (14:42 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:37:16 +0000 (14:37 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:36:46 +0000 (14:36 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:36:02 +0000 (14:36 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:34:29 +0000 (14:34 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:31:19 +0000 (14:31 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:27:53 +0000 (14:27 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:26:33 +0000 (14:26 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:25:18 +0000 (14:25 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:24:41 +0000 (14:24 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:23:51 +0000 (14:23 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:23:15 +0000 (14:23 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:22:56 +0000 (14:22 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:22:44 +0000 (14:22 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:22:08 +0000 (14:22 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:20:39 +0000 (14:20 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:20:04 +0000 (14:20 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:18:15 +0000 (14:18 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:17:28 +0000 (14:17 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:16:45 +0000 (14:16 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:14:36 +0000 (14:14 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:13:28 +0000 (14:13 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:05:26 +0000 (14:05 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:04:40 +0000 (14:04 +0000)]
update ReferenceFactory method
Andreas Müller [Tue, 23 Apr 2013 14:03:42 +0000 (14:03 +0000)]
update ReferenceFactory method