cdmlib.git
12 years agoUpdates to DwcA import (namePublishedIn, accordingTo, etc.)
Andreas Müller [Wed, 28 Mar 2012 17:06:38 +0000 (17:06 +0000)]
Updates to DwcA import (namePublishedIn, accordingTo, etc.)

12 years agoconvenience methods for file and uri handling
Andreas Müller [Wed, 28 Mar 2012 11:49:13 +0000 (11:49 +0000)]
convenience methods for file and uri handling

12 years agomake mapping type configurable
Andreas Müller [Tue, 27 Mar 2012 17:48:19 +0000 (17:48 +0000)]
make mapping type configurable

12 years agologging improvements and error handling for DwcA
Andreas Müller [Tue, 27 Mar 2012 17:29:55 +0000 (17:29 +0000)]
logging improvements and error handling for DwcA

12 years agologging improvements and error handling for DwcA
Andreas Müller [Tue, 27 Mar 2012 17:29:19 +0000 (17:29 +0000)]
logging improvements and error handling for DwcA

12 years agoupdate for dwca import
Andreas Müller [Tue, 27 Mar 2012 10:51:14 +0000 (10:51 +0000)]
update for dwca import

12 years agoDatabaseMapping works
Andreas Müller [Mon, 26 Mar 2012 20:41:40 +0000 (20:41 +0000)]
DatabaseMapping works

12 years agosome more error logging
Andreas Müller [Mon, 26 Mar 2012 12:43:00 +0000 (12:43 +0000)]
some more error logging

12 years agoSource catches all exceptions now
Andreas Müller [Mon, 26 Mar 2012 11:04:12 +0000 (11:04 +0000)]
Source catches all exceptions now

12 years agoadded makeTaxonUrl to BM import
Andreas Müller [Mon, 26 Mar 2012 11:03:31 +0000 (11:03 +0000)]
added makeTaxonUrl to BM import

12 years agominor
Andreas Müller [Mon, 26 Mar 2012 11:01:22 +0000 (11:01 +0000)]
minor

12 years agobugfix for failing compile, throw datassource not found
Andreas Müller [Mon, 26 Mar 2012 09:22:06 +0000 (09:22 +0000)]
bugfix for failing compile, throw datassource not found

12 years agobugfix for failing compile, throw datassource not found
Andreas Müller [Mon, 26 Mar 2012 09:21:45 +0000 (09:21 +0000)]
bugfix for failing compile, throw datassource not found

12 years agotest partition size to 3
Andreas Müller [Mon, 26 Mar 2012 08:59:09 +0000 (08:59 +0000)]
test partition size to 3

12 years agoupdates to dwca-in
Andreas Müller [Mon, 26 Mar 2012 08:58:39 +0000 (08:58 +0000)]
updates to dwca-in

12 years agothrow exception for datasource not found
Andreas Müller [Mon, 26 Mar 2012 08:56:57 +0000 (08:56 +0000)]
throw exception for datasource not found

12 years agominor
Andreas Müller [Mon, 26 Mar 2012 08:49:22 +0000 (08:49 +0000)]
minor

12 years agosave replaced by saveOrUpdate
Andreas Müller [Mon, 26 Mar 2012 08:48:45 +0000 (08:48 +0000)]
save replaced by saveOrUpdate

12 years agoLatest developments for DwcA-Import
Andreas Müller [Wed, 21 Mar 2012 06:13:39 +0000 (06:13 +0000)]
Latest developments for DwcA-Import

12 years agoxsl stylesheets for rest service api endpoints
Andreas Kohlbecker [Tue, 20 Mar 2012 12:57:47 +0000 (12:57 +0000)]
xsl stylesheets for rest service api endpoints

12 years agomoving webapplication configuration into cdmlib-remote
Andreas Kohlbecker [Tue, 20 Mar 2012 08:42:11 +0000 (08:42 +0000)]
moving webapplication configuration into cdmlib-remote

12 years agominor
Andreas Müller [Mon, 19 Mar 2012 17:46:37 +0000 (17:46 +0000)]
minor

12 years agolatest developments in DwcA import
Andreas Müller [Mon, 19 Mar 2012 17:45:55 +0000 (17:45 +0000)]
latest developments in DwcA import

12 years agoadded findById(Set) to IService
Andreas Müller [Mon, 19 Mar 2012 16:49:00 +0000 (16:49 +0000)]
added findById(Set) to IService

12 years agoinclude taxRel 40 to BM import
Andreas Müller [Mon, 19 Mar 2012 12:56:12 +0000 (12:56 +0000)]
include taxRel 40 to BM import

12 years agosome logging improvements
Andreas Müller [Mon, 19 Mar 2012 12:54:57 +0000 (12:54 +0000)]
some logging improvements

12 years agoremove imports
Andreas Müller [Mon, 19 Mar 2012 12:52:38 +0000 (12:52 +0000)]
remove imports

12 years agonot congruent to and treated as later homonym for BM import
Andreas Müller [Sat, 17 Mar 2012 00:06:28 +0000 (00:06 +0000)]
not congruent to and treated as later homonym for BM import

12 years agobugfix for missing sequence column
Andreas Müller [Fri, 16 Mar 2012 23:39:02 +0000 (23:39 +0000)]
bugfix for missing sequence column

12 years agobugfix for nomRef date and failing cache strategy tests
Andreas Müller [Fri, 16 Mar 2012 16:40:01 +0000 (16:40 +0000)]
bugfix for nomRef date and failing cache strategy tests

12 years agobugfix in BerlinModel TaxRel import, use classificationQuery if NOT null
Andreas Müller [Fri, 16 Mar 2012 14:51:19 +0000 (14:51 +0000)]
bugfix in BerlinModel TaxRel import, use classificationQuery if NOT null

12 years agomoved otherArea handling to Base class
Andreas Müller [Fri, 16 Mar 2012 14:50:10 +0000 (14:50 +0000)]
moved otherArea handling to Base class

12 years agologging and bugfix for BM common name import
Andreas Müller [Fri, 16 Mar 2012 14:49:33 +0000 (14:49 +0000)]
logging and bugfix for BM common name import

12 years agobugifx for TaxonName import validation
Andreas Müller [Fri, 16 Mar 2012 14:48:36 +0000 (14:48 +0000)]
bugifx for TaxonName import validation

12 years agogetDatePublishedString for Reference
Andreas Müller [Fri, 16 Mar 2012 14:47:51 +0000 (14:47 +0000)]
getDatePublishedString for Reference

12 years agoupdate for reference cache strategies, not yet ready, see also http://dev.e-taxonomy...
Andreas Müller [Fri, 16 Mar 2012 14:47:13 +0000 (14:47 +0000)]
update for reference cache strategies, not yet ready, see also dev.e-taxonomy.eu/trac/ticket/2862

12 years agowarn->info for ignore
Andreas Müller [Fri, 16 Mar 2012 13:10:22 +0000 (13:10 +0000)]
warn->info for ignore

12 years agowarn->info for check is missing
Andreas Müller [Fri, 16 Mar 2012 12:38:33 +0000 (12:38 +0000)]
warn->info for check is missing

12 years agobugfix titleCache for generic references with inReference
Andreas Müller [Thu, 15 Mar 2012 14:54:54 +0000 (14:54 +0000)]
bugfix titleCache for generic references with inReference

12 years agoimplement nomenclaturalTitle for generic references (titleCache still missing)
Andreas Müller [Thu, 15 Mar 2012 13:05:11 +0000 (13:05 +0000)]
implement nomenclaturalTitle for generic references (titleCache still missing)

12 years agonew getters for extensions
Andreas Müller [Wed, 14 Mar 2012 16:47:12 +0000 (16:47 +0000)]
new getters for extensions

12 years agoBugfix for reference import
Andreas Müller [Wed, 14 Mar 2012 13:03:29 +0000 (13:03 +0000)]
Bugfix for reference import

12 years agobugfixes on BM common name import, change query, handle misapplications, logging
Andreas Müller [Wed, 14 Mar 2012 12:09:52 +0000 (12:09 +0000)]
bugfixes on BM common name import, change query, handle misapplications, logging

12 years ago(no commit message)
Katja Luther [Wed, 14 Mar 2012 10:19:12 +0000 (10:19 +0000)]

12 years ago(no commit message)
Katja Luther [Wed, 14 Mar 2012 09:46:50 +0000 (09:46 +0000)]

12 years agobugfix for #2858
Andreas Müller [Wed, 14 Mar 2012 09:31:52 +0000 (09:31 +0000)]
bugfix for #2858

12 years agominor
Andreas Müller [Tue, 13 Mar 2012 23:40:59 +0000 (23:40 +0000)]
minor

12 years agominor
Andreas Müller [Tue, 13 Mar 2012 23:40:23 +0000 (23:40 +0000)]
minor

12 years agobugfix for spanish i in common names import
Andreas Müller [Tue, 13 Mar 2012 23:38:43 +0000 (23:38 +0000)]
bugfix for spanish i in common names import

12 years agoUpdates to Berlin MOdel import (mainly common names)
Andreas Müller [Tue, 13 Mar 2012 17:49:52 +0000 (17:49 +0000)]
Updates to Berlin MOdel import (mainly common names)

12 years agominor logging improvement
Andreas Müller [Tue, 13 Mar 2012 16:33:01 +0000 (16:33 +0000)]
minor logging improvement

12 years agoHopefully fixes #2732 and some logging issues
Andreas Müller [Tue, 13 Mar 2012 15:37:53 +0000 (15:37 +0000)]
Hopefully fixes #2732 and some logging issues

12 years agouse correct transactions source references
Andreas Müller [Mon, 12 Mar 2012 17:50:44 +0000 (17:50 +0000)]
use correct transactions source references

12 years agoFixes a problem with the new ID generator, that prevented the creation of new CDM...
n.hoffmann [Mon, 12 Mar 2012 16:17:38 +0000 (16:17 +0000)]
Fixes a problem with the new ID generator, that prevented the creation of new CDM objects

12 years agouse transactional source reference in BM import
Andreas Müller [Sun, 11 Mar 2012 09:21:27 +0000 (09:21 +0000)]
use transactional source reference in BM import

12 years agolatest changes to Dwca Import
Andreas Müller [Sat, 10 Mar 2012 00:21:23 +0000 (00:21 +0000)]
latest changes to Dwca Import

12 years agofix failing Dwca test
Andreas Müller [Fri, 9 Mar 2012 21:08:09 +0000 (21:08 +0000)]
fix failing Dwca test

12 years agobugfix for Dwca missing synonyms
Andreas Müller [Fri, 9 Mar 2012 14:41:48 +0000 (14:41 +0000)]
bugfix for Dwca missing synonyms

12 years agobugfix for failing test in Dwca Import
Andreas Müller [Fri, 9 Mar 2012 14:34:19 +0000 (14:34 +0000)]
bugfix for failing test in Dwca Import

12 years agoupdate Dwca Test data
Andreas Müller [Fri, 9 Mar 2012 14:00:44 +0000 (14:00 +0000)]
update Dwca Test data

12 years agonew method in CdmUtils
Andreas Müller [Fri, 9 Mar 2012 13:55:05 +0000 (13:55 +0000)]
new method in CdmUtils

12 years agoupdate Dwca Import tests
Andreas Müller [Fri, 9 Mar 2012 13:54:34 +0000 (13:54 +0000)]
update Dwca Import tests

12 years agoupdate Dwca Import
Andreas Müller [Fri, 9 Mar 2012 13:53:23 +0000 (13:53 +0000)]
update Dwca Import

12 years agominor
Andreas Müller [Fri, 9 Mar 2012 13:52:39 +0000 (13:52 +0000)]
minor

12 years agoimplemented findId in IService
Andreas Müller [Fri, 9 Mar 2012 13:51:42 +0000 (13:51 +0000)]
implemented findId in IService

12 years agoupdate Dwca Test data
Andreas Müller [Fri, 9 Mar 2012 13:50:23 +0000 (13:50 +0000)]
update Dwca Test data

12 years agominor change in p6spy.properties - using default log file
Andreas Kohlbecker [Fri, 9 Mar 2012 09:29:13 +0000 (09:29 +0000)]
minor change in p6spy.properties - using default log file

12 years agoremoving debug log
Andreas Kohlbecker [Fri, 9 Mar 2012 08:27:58 +0000 (08:27 +0000)]
removing debug log

12 years agominor
Andreas Müller [Wed, 7 Mar 2012 16:08:01 +0000 (16:08 +0000)]
minor

12 years agoupdate for Dwca import test data, include parentID and bugfixes
Andreas Müller [Wed, 7 Mar 2012 13:07:23 +0000 (13:07 +0000)]
update for Dwca import test data, include parentID and bugfixes

12 years agofixing problem with standalone DwcaImportTest. Using DefaultTermInitializer. This...
Andreas Müller [Wed, 7 Mar 2012 12:22:35 +0000 (12:22 +0000)]
fixing problem with standalone DwcaImportTest. Using DefaultTermInitializer. This may cause problems in test suite.

12 years agominor
Andreas Müller [Wed, 7 Mar 2012 12:17:51 +0000 (12:17 +0000)]
minor

12 years agoupdate to some mappers
Andreas Müller [Wed, 7 Mar 2012 12:09:07 +0000 (12:09 +0000)]
update to some mappers

12 years agoimplement source reference for partitions
Andreas Müller [Tue, 6 Mar 2012 15:32:44 +0000 (15:32 +0000)]
implement source reference for partitions

12 years agoimprove getRank
Andreas Müller [Tue, 6 Mar 2012 10:55:31 +0000 (10:55 +0000)]
improve getRank

12 years agoadd licence info
Andreas Müller [Mon, 5 Mar 2012 22:50:31 +0000 (22:50 +0000)]
add licence info

12 years agocorrect handling for canary islands, baleares and azores for BerlinModel import and...
Andreas Müller [Mon, 5 Mar 2012 09:04:49 +0000 (09:04 +0000)]
correct handling for canary islands, baleares and azores for BerlinModel import and PESI export

12 years agoadd o with diaeresis to name parser
Andreas Müller [Fri, 2 Mar 2012 15:11:16 +0000 (15:11 +0000)]
add o with diaeresis to name parser

12 years agoAdd e with diaresis to epithet parser
Andreas Müller [Fri, 2 Mar 2012 14:13:54 +0000 (14:13 +0000)]
Add e with diaresis to epithet parser

12 years agoadd hasNoLastAction
Andreas Müller [Fri, 2 Mar 2012 13:39:05 +0000 (13:39 +0000)]
add hasNoLastAction

12 years agoadd hasMarker
Andreas Müller [Fri, 2 Mar 2012 13:35:00 +0000 (13:35 +0000)]
add hasMarker

12 years agobugfix for BM common name import
Andreas Müller [Fri, 2 Mar 2012 09:21:40 +0000 (09:21 +0000)]
bugfix for BM common name import

12 years agoSet hybridFormulas to preliminary #2721
Andreas Müller [Fri, 2 Mar 2012 00:18:10 +0000 (00:18 +0000)]
Set hybridFormulas to preliminary #2721

12 years agobugfix for taxonDao.getAllRelationships
Andreas Müller [Thu, 1 Mar 2012 19:03:53 +0000 (19:03 +0000)]
bugfix for taxonDao.getAllRelationships

12 years agofix botanical name cache strategy, due to reference cache strategy changes
Andreas Müller [Thu, 1 Mar 2012 09:03:40 +0000 (09:03 +0000)]
fix botanical name cache strategy, due to reference cache strategy changes

12 years agofix parser bugs, due to cache strategy changes
Andreas Müller [Thu, 1 Mar 2012 08:35:34 +0000 (08:35 +0000)]
fix parser bugs, due to cache strategy changes

12 years agoadd comma before edition in cache strategy
Andreas Müller [Wed, 29 Feb 2012 23:22:08 +0000 (23:22 +0000)]
add comma before edition in cache strategy

12 years agobugfix for BM CommonName areas
Andreas Müller [Wed, 29 Feb 2012 22:46:21 +0000 (22:46 +0000)]
bugfix for BM CommonName areas

12 years agoremove imports
Andreas Müller [Wed, 29 Feb 2012 20:41:31 +0000 (20:41 +0000)]
remove imports

12 years agofix Sr mapping in BM occurrence import
Andreas Müller [Wed, 29 Feb 2012 16:46:35 +0000 (16:46 +0000)]
fix Sr mapping in BM occurrence import

12 years agofix ExtensionMapper for extensionType == null
Andreas Müller [Wed, 29 Feb 2012 15:08:00 +0000 (15:08 +0000)]
fix ExtensionMapper for extensionType == null

12 years agoshow destination correctly for export
Andreas Müller [Wed, 29 Feb 2012 13:48:23 +0000 (13:48 +0000)]
show destination correctly for export

12 years ago(no commit message)
Katja Luther [Wed, 29 Feb 2012 10:27:15 +0000 (10:27 +0000)]

12 years ago(no commit message)
Katja Luther [Wed, 29 Feb 2012 10:26:58 +0000 (10:26 +0000)]

12 years agolatest developments for Index Fungorum import
Andreas Müller [Tue, 28 Feb 2012 18:13:56 +0000 (18:13 +0000)]
latest developments for Index Fungorum import

12 years agofixing syntax problems
Andreas Kohlbecker [Tue, 28 Feb 2012 16:13:59 +0000 (16:13 +0000)]
fixing syntax problems

12 years agore-integrating branch cdmlib/3.x-unitils-upgrade
Andreas Kohlbecker [Tue, 28 Feb 2012 14:04:50 +0000 (14:04 +0000)]
re-integrating branch cdmlib/3.x-unitils-upgrade

12 years agodebug and log
Andreas Kohlbecker [Tue, 28 Feb 2012 13:08:49 +0000 (13:08 +0000)]
debug and log

12 years agologging log transaction binding (disabled)
Andreas Kohlbecker [Tue, 28 Feb 2012 13:02:57 +0000 (13:02 +0000)]
logging log transaction binding (disabled)

12 years agobugfix for TaxonServiceImplTests
Andreas Müller [Tue, 28 Feb 2012 09:23:48 +0000 (09:23 +0000)]
bugfix for TaxonServiceImplTests