cdmlib.git
14 years agobugfix for TaxonNode.getParent == null
Andreas Müller [Wed, 10 Feb 2010 15:26:22 +0000 (15:26 +0000)]
bugfix for TaxonNode.getParent == null

14 years agoticket #1375: exe file for the cdm server with help of the tool launch4java and modif...
f.revilla [Wed, 10 Feb 2010 10:10:45 +0000 (10:10 +0000)]
ticket #1375: exe file for the cdm server with help of the tool launch4java and modifications to the nsi file in order to use the new exe file

14 years agomake reported in error an absence term
Andreas Müller [Tue, 9 Feb 2010 17:41:12 +0000 (17:41 +0000)]
make reported in error an absence term

14 years agomake reported in error an absence term
Andreas Müller [Tue, 9 Feb 2010 16:58:44 +0000 (16:58 +0000)]
make reported in error an absence term

14 years agominor
Andreas Müller [Tue, 9 Feb 2010 16:56:44 +0000 (16:56 +0000)]
minor

14 years agomake reported in error an absence term in BM & FE import
Andreas Müller [Tue, 9 Feb 2010 16:55:52 +0000 (16:55 +0000)]
make reported in error an absence term in BM & FE import

14 years agoscripts for the debian package
f.revilla [Mon, 8 Feb 2010 16:14:43 +0000 (16:14 +0000)]
scripts for the debian package

14 years ago(no commit message)
Katja Luther [Mon, 8 Feb 2010 13:48:21 +0000 (13:48 +0000)]

14 years ago(no commit message)
Katja Luther [Mon, 8 Feb 2010 13:47:51 +0000 (13:47 +0000)]

14 years ago(no commit message)
Katja Luther [Mon, 8 Feb 2010 13:47:37 +0000 (13:47 +0000)]

14 years agomoving installer folder
Andreas Kohlbecker [Mon, 8 Feb 2010 12:03:36 +0000 (12:03 +0000)]
moving installer folder

14 years agocode cleaning
Andreas Kohlbecker [Mon, 8 Feb 2010 10:59:58 +0000 (10:59 +0000)]
code cleaning

14 years agofixing bug in loadRankSpecificRootNodes
Andreas Kohlbecker [Mon, 8 Feb 2010 10:59:13 +0000 (10:59 +0000)]
fixing bug in loadRankSpecificRootNodes

14 years agominor change on comment
Andreas Kohlbecker [Mon, 8 Feb 2010 10:53:35 +0000 (10:53 +0000)]
minor change on comment

14 years agoWorkaround for out of memory issues: Added logic to split the amount of taxa to be...
em.lee [Mon, 8 Feb 2010 10:20:17 +0000 (10:20 +0000)]
Workaround for out of memory issues: Added logic to split the amount of taxa to be saved into small groups (similar to fauna europaea import).

14 years agoAdded 'limitSave' to set/get an upper limit amount of taxa to be saved at once (simil...
em.lee [Mon, 8 Feb 2010 10:17:34 +0000 (10:17 +0000)]
Added 'limitSave' to set/get an upper limit amount of taxa to be saved at once (similar to fauna europaea configurator).

14 years agomissing parent pom.xml for c3p0 [change sets: 8000, 8002]
Andreas Kohlbecker [Mon, 8 Feb 2010 09:48:23 +0000 (09:48 +0000)]
missing parent pom.xml for c3p0 [change sets: 8000, 8002]

14 years agoremoved System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:31:25 +0000 (09:31 +0000)]
removed System.err.println()

14 years agoremoved System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:27:16 +0000 (09:27 +0000)]
removed System.err.println()

14 years agoremoved System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:20:01 +0000 (09:20 +0000)]
removed System.err.println()

14 years agoremoved system.err.println()
Katja Luther [Mon, 8 Feb 2010 09:14:08 +0000 (09:14 +0000)]
removed system.err.println()

14 years agoremoved system.err.println()
Katja Luther [Mon, 8 Feb 2010 09:11:49 +0000 (09:11 +0000)]
removed system.err.println()

14 years agofixing jet another LazyLoadingException
Andreas Kohlbecker [Fri, 5 Feb 2010 12:24:27 +0000 (12:24 +0000)]
fixing jet another LazyLoadingException

14 years agopreparing for hibernate-c3p0 & removing out all System.err.println & avoiding proxy...
Andreas Kohlbecker [Fri, 5 Feb 2010 08:58:26 +0000 (08:58 +0000)]
preparing for hibernate-c3p0 & removing out all System.err.println & avoiding proxy narrow log of hibernate

14 years agoimproving loadRankSpecificRootNodes
Andreas Kohlbecker [Fri, 5 Feb 2010 08:56:17 +0000 (08:56 +0000)]
improving loadRankSpecificRootNodes

14 years agopreparing for hibernate-c3p0 & commenting out all System.err.println
Andreas Kohlbecker [Fri, 5 Feb 2010 08:48:13 +0000 (08:48 +0000)]
preparing for hibernate-c3p0 & commenting out all System.err.println

14 years agoimproving loadRankSpecificRootNodes
Andreas Kohlbecker [Fri, 5 Feb 2010 08:45:40 +0000 (08:45 +0000)]
improving loadRankSpecificRootNodes

14 years agoimproving loadRankSpecificRootNodes
Andreas Kohlbecker [Fri, 5 Feb 2010 08:43:52 +0000 (08:43 +0000)]
improving loadRankSpecificRootNodes

14 years agoremoved citations feature from palmae feature tree (was a duplicate)
Andreas Müller [Tue, 2 Feb 2010 17:59:35 +0000 (17:59 +0000)]
removed citations feature from palmae feature tree (was a duplicate)

14 years agoSearch in Taxonomic Editor runs in it's own thread now.
n.hoffmann [Tue, 2 Feb 2010 16:50:41 +0000 (16:50 +0000)]
Search in Taxonomic Editor runs in it's own thread now.

14 years agoAdded citations feature to palmae feature tree
Andreas Müller [Tue, 2 Feb 2010 14:26:03 +0000 (14:26 +0000)]
Added citations feature to palmae feature tree

14 years ago(no commit message)
n.hoffmann [Tue, 2 Feb 2010 10:04:16 +0000 (10:04 +0000)]

14 years agoadded service to get all taxon nodes
Katja Luther [Fri, 29 Jan 2010 14:32:25 +0000 (14:32 +0000)]
added service to get all taxon nodes

14 years agofix the jaxb import/export
Katja Luther [Fri, 29 Jan 2010 14:30:27 +0000 (14:30 +0000)]
fix the jaxb import/export

14 years agowhile unmarshalling the xml escaping has to be reversed
Katja Luther [Fri, 29 Jan 2010 14:28:04 +0000 (14:28 +0000)]
while unmarshalling the xml escaping has to be reversed

14 years agoAdded setter/getter for TaxonNamePropertyPath
em.lee [Fri, 29 Jan 2010 14:15:36 +0000 (14:15 +0000)]
Added setter/getter for TaxonNamePropertyPath

14 years agoAdded setter/getter for TaxonNamePropertyPath
em.lee [Fri, 29 Jan 2010 14:14:48 +0000 (14:14 +0000)]
Added setter/getter for TaxonNamePropertyPath

14 years agoHandle errors in Excel file
n.hoffmann [Fri, 29 Jan 2010 14:14:47 +0000 (14:14 +0000)]
Handle errors in Excel file

14 years agoUsing newly added TaxonNamePropertyPath
em.lee [Fri, 29 Jan 2010 14:13:59 +0000 (14:13 +0000)]
Using newly added TaxonNamePropertyPath

14 years agoHandle errors in Excel file
n.hoffmann [Fri, 29 Jan 2010 14:11:03 +0000 (14:11 +0000)]
Handle errors in Excel file

14 years agoHandle errors in Excel file
n.hoffmann [Fri, 29 Jan 2010 14:02:07 +0000 (14:02 +0000)]
Handle errors in Excel file

14 years agoan & in the xml lead to errors during parsing
n.hoffmann [Fri, 29 Jan 2010 13:48:50 +0000 (13:48 +0000)]
an & in the xml lead to errors during parsing

14 years agoan & in the xml lead to errors during parsing
n.hoffmann [Fri, 29 Jan 2010 13:45:27 +0000 (13:45 +0000)]
an & in the xml lead to errors during parsing

14 years agoXmlHelp munched exceptions. That is not very helpful.
n.hoffmann [Fri, 29 Jan 2010 13:34:29 +0000 (13:34 +0000)]
XmlHelp munched exceptions. That is not very helpful.

14 years agowindows installation files
f.revilla [Fri, 29 Jan 2010 12:49:44 +0000 (12:49 +0000)]
windows installation files

14 years agonew folder structure for installers
f.revilla [Fri, 29 Jan 2010 10:13:06 +0000 (10:13 +0000)]
new folder structure for installers

14 years agonew folder structure for installers
f.revilla [Fri, 29 Jan 2010 10:12:40 +0000 (10:12 +0000)]
new folder structure for installers

14 years ago(no commit message)
Katja Luther [Thu, 28 Jan 2010 15:38:26 +0000 (15:38 +0000)]

14 years agominor
n.hoffmann [Thu, 28 Jan 2010 14:38:01 +0000 (14:38 +0000)]
minor

14 years agomatching is now configurable in the editor
n.hoffmann [Thu, 28 Jan 2010 14:19:43 +0000 (14:19 +0000)]
matching is now configurable in the editor

14 years agominor
Andreas Müller [Thu, 28 Jan 2010 13:34:48 +0000 (13:34 +0000)]
minor

14 years ago(no commit message)
Katja Luther [Wed, 27 Jan 2010 15:45:30 +0000 (15:45 +0000)]

14 years agomoved image functionality into the library
n.hoffmann [Wed, 27 Jan 2010 15:02:36 +0000 (15:02 +0000)]
moved image functionality into the library

14 years agomoved image functionality into the library
n.hoffmann [Wed, 27 Jan 2010 13:14:58 +0000 (13:14 +0000)]
moved image functionality into the library

14 years ago(no commit message)
Katja Luther [Wed, 27 Jan 2010 09:38:35 +0000 (09:38 +0000)]

14 years agofixes #1407
n.hoffmann [Tue, 26 Jan 2010 17:48:11 +0000 (17:48 +0000)]
fixes #1407

14 years ago(no commit message)
n.hoffmann [Tue, 26 Jan 2010 17:39:30 +0000 (17:39 +0000)]

14 years agoLatest TaxonX files for palms import added
n.hoffmann [Mon, 25 Jan 2010 14:09:46 +0000 (14:09 +0000)]
Latest TaxonX files for palms import added

14 years agoAdded WorkingSetDao & Service
ben.clark [Fri, 22 Jan 2010 16:24:52 +0000 (16:24 +0000)]
Added WorkingSetDao & Service

14 years agoAdded WorkingSetDao & Service
ben.clark [Fri, 22 Jan 2010 16:24:25 +0000 (16:24 +0000)]
Added WorkingSetDao & Service

14 years agoChanges to NonViralName.getTitleCache()
ben.clark [Fri, 22 Jan 2010 16:23:34 +0000 (16:23 +0000)]
Changes to NonViralName.getTitleCache()

14 years agogetMatchMode() in DefaultMatchStrategy is now failsafe
n.hoffmann [Fri, 22 Jan 2010 14:34:08 +0000 (14:34 +0000)]
getMatchMode() in DefaultMatchStrategy is now failsafe

14 years agomoved functionality from editor to library
n.hoffmann [Thu, 21 Jan 2010 19:30:13 +0000 (19:30 +0000)]
moved functionality from editor to library

14 years ago(no commit message)
n.hoffmann [Thu, 21 Jan 2010 10:34:57 +0000 (10:34 +0000)]

14 years agoshorter timeout for metadata service
Andreas Kohlbecker [Wed, 20 Jan 2010 12:56:21 +0000 (12:56 +0000)]
shorter timeout for metadata service

14 years agomini fix
Andreas Kohlbecker [Tue, 19 Jan 2010 20:29:22 +0000 (20:29 +0000)]
mini fix

14 years agoallowing to write
Andreas Kohlbecker [Tue, 19 Jan 2010 16:44:54 +0000 (16:44 +0000)]
allowing to write

14 years agoFeatureTreeService now returns a default FeatureTree when no tree is in database...
n.hoffmann [Tue, 19 Jan 2010 15:18:15 +0000 (15:18 +0000)]
FeatureTreeService now returns a default FeatureTree when no tree is in database. Testing it with portal now.

14 years agoAdded constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRel...
ben.clark [Sun, 17 Jan 2010 19:39:07 +0000 (19:39 +0000)]
Added constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRelationship.relatedFrom & SynonymRelationship.relatedTo to mark orphaned synonyms as invalid. [https://dev.e-taxonomy.eu/trac/ticket/1347]

Also, added constraint such that two accepted names or an accepted name and a synonym with the same sec reference and the same name are invalid.

14 years agoAdded constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRel...
ben.clark [Sun, 17 Jan 2010 19:38:50 +0000 (19:38 +0000)]
Added constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRelationship.relatedFrom & SynonymRelationship.relatedTo to mark orphaned synonyms as invalid. [https://dev.e-taxonomy.eu/trac/ticket/1347]

Also, added constraint such that two accepted names or an accepted name and a synonym with the same sec reference and the same name are invalid.

14 years agoTrace
m.venin [Fri, 15 Jan 2010 16:19:18 +0000 (16:19 +0000)]
Trace

14 years agoTrace v2
Andreas Kohlbecker [Fri, 15 Jan 2010 16:14:54 +0000 (16:14 +0000)]
Trace v2

14 years agoTrace
Andreas Kohlbecker [Fri, 15 Jan 2010 16:10:36 +0000 (16:10 +0000)]
Trace

14 years agotest commit
Andreas Kohlbecker [Fri, 15 Jan 2010 16:07:01 +0000 (16:07 +0000)]
test commit

14 years ago(no commit message)
Katja Luther [Fri, 15 Jan 2010 12:24:51 +0000 (12:24 +0000)]

14 years ago(no commit message)
Katja Luther [Fri, 15 Jan 2010 12:23:11 +0000 (12:23 +0000)]

14 years agoin xml file taxonnode is referenced by id
Katja Luther [Fri, 15 Jan 2010 12:22:44 +0000 (12:22 +0000)]
in xml file taxonnode is referenced by id
#1277 jaxb import

14 years ago#1277 jaxb import, set id to @XmlTransient
Katja Luther [Fri, 15 Jan 2010 12:21:23 +0000 (12:21 +0000)]
#1277 jaxb import, set id to @XmlTransient

14 years ago#1277 jaxb import
Katja Luther [Fri, 15 Jan 2010 12:20:12 +0000 (12:20 +0000)]
#1277 jaxb import

14 years agoAdded isDatabaseSchemaCompatible().
em.lee [Fri, 15 Jan 2010 11:11:03 +0000 (11:11 +0000)]
Added isDatabaseSchemaCompatible().

14 years agoAdded isDatabaseSchemaCompatible().
em.lee [Fri, 15 Jan 2010 11:10:38 +0000 (11:10 +0000)]
Added isDatabaseSchemaCompatible().

14 years agoCorrected bug in AuditEventDao
ben.clark [Wed, 13 Jan 2010 16:52:31 +0000 (16:52 +0000)]
Corrected bug in AuditEventDao

14 years agomanagement service (/manager/datasources/*) ( and management page (/index.jsp)
Andreas Kohlbecker [Wed, 13 Jan 2010 12:01:35 +0000 (12:01 +0000)]
management service (/manager/datasources/*) ( and management page (/index.jsp)

14 years agoimproving datasource management
Andreas Kohlbecker [Wed, 13 Jan 2010 11:59:31 +0000 (11:59 +0000)]
improving datasource management

14 years ago(no commit message)
Katja Luther [Wed, 13 Jan 2010 10:46:52 +0000 (10:46 +0000)]

14 years ago(no commit message)
Katja Luther [Wed, 13 Jan 2010 10:46:31 +0000 (10:46 +0000)]

14 years ago(no commit message)
Katja Luther [Wed, 13 Jan 2010 10:46:22 +0000 (10:46 +0000)]

14 years agonew test for the delete method of TaxonNameDao
Katja Luther [Wed, 13 Jan 2010 10:38:59 +0000 (10:38 +0000)]
new test for the delete method of TaxonNameDao

14 years agoimplement the delete method, to delete the refering taxonbases #1390
Katja Luther [Wed, 13 Jan 2010 10:31:12 +0000 (10:31 +0000)]
implement the delete method, to delete the refering taxonbases #1390

14 years agoAdded protected setter methods to Synonym.synonymRelations and Taxon.relationsToThisT...
ben.clark [Tue, 12 Jan 2010 15:54:28 +0000 (15:54 +0000)]
Added protected setter methods to Synonym.synonymRelations and Taxon.relationsToThisTaxon to allow bean initialization

14 years ago#1279
em.lee [Tue, 12 Jan 2010 13:45:50 +0000 (13:45 +0000)]
#1279

14 years ago#1279
em.lee [Tue, 12 Jan 2010 13:45:22 +0000 (13:45 +0000)]
#1279

14 years agominor change
Andreas Kohlbecker [Tue, 12 Jan 2010 08:59:55 +0000 (08:59 +0000)]
minor change

14 years agofixed bug in listDescriptions
ben.clark [Mon, 11 Jan 2010 16:17:54 +0000 (16:17 +0000)]
fixed bug in listDescriptions

14 years agoUpdated cascade sematics for determinations
ben.clark [Mon, 11 Jan 2010 16:08:25 +0000 (16:08 +0000)]
Updated cascade sematics for determinations

14 years ago#1390
Katja Luther [Mon, 11 Jan 2010 14:28:03 +0000 (14:28 +0000)]
#1390

14 years ago#1390
Katja Luther [Mon, 11 Jan 2010 14:15:03 +0000 (14:15 +0000)]
#1390

14 years ago#1390
Katja Luther [Mon, 11 Jan 2010 14:14:52 +0000 (14:14 +0000)]
#1390

14 years agoPreparatory work for ticket #1347.
em.lee [Fri, 8 Jan 2010 16:45:47 +0000 (16:45 +0000)]
Preparatory work for ticket #1347.

14 years agoPreparatory work for ticket #1347.
em.lee [Fri, 8 Jan 2010 16:45:21 +0000 (16:45 +0000)]
Preparatory work for ticket #1347.