cdmlib.git
12 years agoupdate Markup import for F. Guianas
Andreas Müller [Wed, 30 May 2012 11:46:47 +0000 (11:46 +0000)]
update Markup import for F. Guianas

12 years agominor
Andreas Müller [Fri, 25 May 2012 16:47:24 +0000 (16:47 +0000)]
minor

12 years agothe exception because of the missing profiling agent is not propagated, only a logger...
Katja Luther [Thu, 24 May 2012 11:18:40 +0000 (11:18 +0000)]
the exception because of the missing profiling agent is not propagated, only a logger message will be written

12 years agobugfix for autonym authorship #2888
Andreas Müller [Thu, 24 May 2012 11:13:51 +0000 (11:13 +0000)]
bugfix for autonym authorship #2888

12 years agobugfix for autonym authorship #2888
Andreas Müller [Thu, 24 May 2012 11:10:15 +0000 (11:10 +0000)]
bugfix for autonym authorship #2888

12 years agoCorrect handling for multiple author teams (replace & by , )
Andreas Müller [Wed, 23 May 2012 16:43:28 +0000 (16:43 +0000)]
Correct handling for multiple author teams (replace & by , )

12 years agoAdded property to associate the vibrant-name.xsl and vibrant-taxon.xsl to the name...
l.morris [Wed, 23 May 2012 15:35:38 +0000 (15:35 +0000)]
Added property to associate the vibrant-name.xsl and vibrant-taxon.xsl to the name/taxon service so that the appropriate XSLT is applied to XML in the web browser.

12 years agofix misspelling for warning
Andreas Müller [Tue, 22 May 2012 15:52:52 +0000 (15:52 +0000)]
fix misspelling for warning

12 years agolatest updates to markup import for FdG
Andreas Müller [Tue, 22 May 2012 15:28:54 +0000 (15:28 +0000)]
latest updates to markup import for FdG

12 years agoAdded citation for homotypic synonyms. Modified citation to include only author surna...
l.morris [Tue, 22 May 2012 13:26:30 +0000 (13:26 +0000)]
Added citation for homotypic synonyms. Modified citation to include only author surnames, rather than synonyms in the PDF print output.

12 years agobugfix for protected name title caches in BM import
Andreas Müller [Tue, 22 May 2012 11:54:24 +0000 (11:54 +0000)]
bugfix for protected name title caches in BM import

12 years agominor
Andreas Müller [Tue, 22 May 2012 10:56:36 +0000 (10:56 +0000)]
minor

12 years agoremove deprecated method
Andreas Müller [Mon, 21 May 2012 16:45:22 +0000 (16:45 +0000)]
remove deprecated method

12 years agodebugging for precision
Andreas Müller [Mon, 21 May 2012 14:40:06 +0000 (14:40 +0000)]
debugging for precision

12 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Tue, 8 May 2012 10:02:32 +0000 (10:02 +0000)]
[maven-release-plugin] prepare for next development iteration

12 years ago[maven-release-plugin] prepare release cdmlib-parent-3.0.10 root/tags/cdmlib/cdmlib-parent-3.0.10 cdmlib-parent-3.0.10
edit-jenkins [Tue, 8 May 2012 10:02:30 +0000 (10:02 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.0.10

12 years agofixing #2879 (Error when using the remote webservice function find NamebyNames)
Andreas Kohlbecker [Mon, 7 May 2012 15:48:53 +0000 (15:48 +0000)]
fixing #2879 (Error when using the remote webservice function find NamebyNames)

12 years agomerging branches/cdmlib/Kew_Palm_Use_Data_Extension into trunk & cleaning up a bit
Andreas Kohlbecker [Mon, 7 May 2012 12:38:20 +0000 (12:38 +0000)]
merging branches/cdmlib/Kew_Palm_Use_Data_Extension into trunk & cleaning up a bit

12 years agoAT: Change to harmonize the Remote controllers Kew_Palm_Use_Data_Extension origin/Kew_Palm_Use_Data_Extension root/branches/cdmlib/Kew_Palm_Use_Data_Extension
a.theys [Mon, 7 May 2012 11:09:25 +0000 (11:09 +0000)]
AT: Change to harmonize the Remote controllers

12 years agomarking methods for harmonization
Andreas Kohlbecker [Mon, 7 May 2012 09:55:26 +0000 (09:55 +0000)]
marking methods for harmonization

12 years agomarking methods for harmonization
Andreas Kohlbecker [Mon, 7 May 2012 09:44:21 +0000 (09:44 +0000)]
marking methods for harmonization

12 years agoAT: Change to harmonize the Remote controllers
a.theys [Mon, 7 May 2012 08:44:59 +0000 (08:44 +0000)]
AT: Change to harmonize the Remote controllers

12 years agoAT: Edited file to remove duplicated call to render
a.theys [Fri, 4 May 2012 17:33:20 +0000 (17:33 +0000)]
AT: Edited file to remove duplicated call to render

12 years agoAT: committing CDMLIB to Branch post Merge
a.theys [Fri, 4 May 2012 17:18:17 +0000 (17:18 +0000)]
AT: committing CDMLIB to Branch post Merge

12 years agoAT: committing latest changes to the CDMLib prior to merging
a.theys [Fri, 4 May 2012 16:57:46 +0000 (16:57 +0000)]
AT: committing latest changes to the CDMLib prior to merging

12 years agoAT: committing latest changes to the CDMLib to try and fix issues with the function...
a.theys [Mon, 30 Apr 2012 16:13:39 +0000 (16:13 +0000)]
AT: committing latest changes to the CDMLib to try and fix issues with the function findByTitle

12 years agoAT: change to fix a lazy initialization problem
a.theys [Thu, 26 Apr 2012 16:22:32 +0000 (16:22 +0000)]
AT: change to fix a lazy initialization problem

12 years agoRemoved console outputs and added check for NameInformation response to add taxon...
Cherian Mathew [Thu, 26 Apr 2012 11:11:10 +0000 (11:11 +0000)]
Removed console outputs and added check for NameInformation response to add taxon lsids only in the case of accepted taxa

12 years agoAT: change of method name and service path
a.theys [Thu, 26 Apr 2012 10:06:45 +0000 (10:06 +0000)]
AT: change of method name and service path

12 years agoAT: committing latest changes to the CDMLib to work from home and fix some outstandin...
a.theys [Wed, 25 Apr 2012 16:27:59 +0000 (16:27 +0000)]
AT: committing latest changes to the CDMLib to work from home and fix some outstanding issues

12 years agoAT: committing latest changes to cdmlib to implement remote methods required by the...
a.theys [Wed, 25 Apr 2012 12:03:02 +0000 (12:03 +0000)]
AT: committing latest changes to cdmlib to implement remote methods required by the dataportal.

12 years agoController class which contains entry points for Name Search, Name Information and...
Cherian Mathew [Tue, 24 Apr 2012 14:11:00 +0000 (14:11 +0000)]
Controller class which contains entry points for Name Search, Name Information and Taxon Information

12 years agoChanged 'getRelatedFrom()' and 'getRelatedTo' from protected to public for controller...
Cherian Mathew [Tue, 24 Apr 2012 14:09:39 +0000 (14:09 +0000)]
Changed 'getRelatedFrom()' and 'getRelatedTo' from protected to public for controller access

12 years agoupdated import of RemoteResponse and ErrorResponse classes
Cherian Mathew [Tue, 24 Apr 2012 14:06:55 +0000 (14:06 +0000)]
updated import of RemoteResponse and ErrorResponse classes

12 years agoRemoteResponse : Root interface for response model enities. This makes it possible...
Cherian Mathew [Tue, 24 Apr 2012 14:06:28 +0000 (14:06 +0000)]
RemoteResponse : Root interface for response model enities. This makes it possible to return a list of different objects (all implementing RemoteResponse)

ErrorResponse : Basic mode entity class which contains an error message

12 years agoNew package which contains dtos for name_catalogue queries
Cherian Mathew [Tue, 24 Apr 2012 13:59:14 +0000 (13:59 +0000)]
New package which contains dtos for name_catalogue queries
- NameSearch for basic name search using string pattern
- NameInformation for name search based on name uuids
- TaxonInformation for taxon search based on taxon uuids

12 years agoAdded json configuration for name_catalogue called 'nameCatalogueJsonConfig'
Cherian Mathew [Tue, 24 Apr 2012 13:56:51 +0000 (13:56 +0000)]
Added json configuration for name_catalogue called 'nameCatalogueJsonConfig'

12 years agoImplementations of functions which,
Cherian Mathew [Tue, 24 Apr 2012 13:55:57 +0000 (13:55 +0000)]
Implementations of functions which,
- find taxon names by title/uuid
- find taxons by uuid

12 years agoAdded 'findTaxonByUuid' for name_catalogue functionality
Cherian Mathew [Tue, 24 Apr 2012 13:46:58 +0000 (13:46 +0000)]
Added 'findTaxonByUuid' for name_catalogue functionality

12 years agoAdded 'findNamesByTitleCache' and 'findNameByUuid' for name_catalogue functionality
Cherian Mathew [Tue, 24 Apr 2012 13:45:58 +0000 (13:45 +0000)]
Added 'findNamesByTitleCache' and 'findNameByUuid' for name_catalogue functionality

12 years agoAdded views for namespace 'name_catalogue'
Cherian Mathew [Tue, 24 Apr 2012 13:31:37 +0000 (13:31 +0000)]
Added views for namespace 'name_catalogue'

12 years agoAT: committing latest changes to the CDMLib during first round of Code review
a.theys [Mon, 23 Apr 2012 13:15:04 +0000 (13:15 +0000)]
AT: committing latest changes to the CDMLib during first round of Code review

12 years agoAT: committing latest changes to the CDMLib (to be used by TaxonCache Strategy) durin...
a.theys [Mon, 23 Apr 2012 09:05:28 +0000 (09:05 +0000)]
AT: committing latest changes to the CDMLib (to be used by TaxonCache Strategy) during first round of Code review

12 years agoAT: committing latest changes to the CDMLib during first round of Code review
a.theys [Mon, 23 Apr 2012 08:32:04 +0000 (08:32 +0000)]
AT: committing latest changes to the CDMLib during first round of Code review

12 years agoAT: committing latest changes to cdmlib to fix an issue with mediaTitle
a.theys [Mon, 23 Apr 2012 07:50:40 +0000 (07:50 +0000)]
AT: committing latest changes to cdmlib to fix an issue with mediaTitle

12 years agofixing localhost issue
Andreas Kohlbecker [Mon, 16 Apr 2012 12:56:23 +0000 (12:56 +0000)]
fixing localhost issue

12 years agodeleting obsolte file
Andreas Kohlbecker [Mon, 16 Apr 2012 12:53:23 +0000 (12:53 +0000)]
deleting obsolte file

12 years agofixing NPE
Andreas Kohlbecker [Mon, 16 Apr 2012 12:47:37 +0000 (12:47 +0000)]
fixing NPE

12 years agoAT: committing Palm extension changes to the CDM Libraries
a.theys [Fri, 13 Apr 2012 15:05:01 +0000 (15:05 +0000)]
AT: committing Palm extension changes to the CDM Libraries

12 years agobugfix for TextDataCreation Mapper (mismatch namespace and dbAttribute
Andreas Müller [Fri, 13 Apr 2012 14:05:52 +0000 (14:05 +0000)]
bugfix for TextDataCreation Mapper (mismatch namespace and dbAttribute

12 years agoadd supplement types to according mappers
Andreas Müller [Fri, 13 Apr 2012 10:48:51 +0000 (10:48 +0000)]
add supplement types to according mappers

12 years agoinclude user defined TaxonRelationship types
Andreas Müller [Thu, 12 Apr 2012 14:42:58 +0000 (14:42 +0000)]
include user defined TaxonRelationship types

12 years agoslightly better handling of precision
Andreas Müller [Thu, 12 Apr 2012 12:16:49 +0000 (12:16 +0000)]
slightly better handling of precision

12 years agochanged BacterialName warning to info
Andreas Müller [Thu, 12 Apr 2012 08:08:35 +0000 (08:08 +0000)]
changed BacterialName warning to info

12 years agominor
l.morris [Wed, 11 Apr 2012 17:24:55 +0000 (17:24 +0000)]
minor

12 years agoremove imports, change return value and some generics
Andreas Müller [Wed, 11 Apr 2012 16:55:29 +0000 (16:55 +0000)]
remove imports, change return value and some generics

12 years agochange MultiLanguageTextMapper to works with TextData.put.Use only 1 language.
Andreas Müller [Wed, 11 Apr 2012 16:54:05 +0000 (16:54 +0000)]
change MultiLanguageTextMapper to works with TextData.put.Use only 1 language.

12 years agoadd putter method to ImportHelper
Andreas Müller [Wed, 11 Apr 2012 16:52:39 +0000 (16:52 +0000)]
add putter method to ImportHelper

12 years agominor
Andreas Müller [Wed, 11 Apr 2012 16:50:59 +0000 (16:50 +0000)]
minor

12 years agofixed URL to background image
l.morris [Wed, 11 Apr 2012 16:24:41 +0000 (16:24 +0000)]
fixed URL to background image

12 years agocommitting merge from vibrant_index with changes to page number display links
l.morris [Wed, 11 Apr 2012 15:15:49 +0000 (15:15 +0000)]
committing merge from vibrant_index with changes to page number display links

12 years agominor
l.morris [Wed, 11 Apr 2012 14:53:28 +0000 (14:53 +0000)]
minor

12 years agosome generics
Andreas Müller [Wed, 11 Apr 2012 14:22:14 +0000 (14:22 +0000)]
some generics

12 years agobetter logging for multilanguage text mapper
Andreas Müller [Wed, 11 Apr 2012 13:36:29 +0000 (13:36 +0000)]
better logging for multilanguage text mapper

12 years agohandle vocabulary in getLanguage
Andreas Müller [Wed, 11 Apr 2012 13:35:30 +0000 (13:35 +0000)]
handle vocabulary in getLanguage

12 years agoadd nameCache index
Andreas Müller [Wed, 11 Apr 2012 12:03:06 +0000 (12:03 +0000)]
add nameCache index

12 years agosome generics
Andreas Müller [Wed, 11 Apr 2012 12:02:27 +0000 (12:02 +0000)]
some generics

12 years agobetter handling of precision
Andreas Müller [Wed, 11 Apr 2012 09:42:26 +0000 (09:42 +0000)]
better handling of precision

12 years agominor
Andreas Müller [Tue, 10 Apr 2012 15:30:19 +0000 (15:30 +0000)]
minor

12 years agoimprove handling of null in rel mappers
Andreas Müller [Tue, 10 Apr 2012 13:54:34 +0000 (13:54 +0000)]
improve handling of null in rel mappers

12 years agono truncation for fields with no precision
Andreas Müller [Tue, 10 Apr 2012 11:23:56 +0000 (11:23 +0000)]
no truncation for fields with no precision

12 years agoimprove logging for rank with no abbrev label
Andreas Müller [Tue, 10 Apr 2012 11:22:31 +0000 (11:22 +0000)]
improve logging for rank with no abbrev label

12 years agofix createInferredSynonyms test
Katja Luther [Tue, 10 Apr 2012 10:29:53 +0000 (10:29 +0000)]
fix createInferredSynonyms test

12 years agominor
Andreas Müller [Tue, 10 Apr 2012 09:52:51 +0000 (09:52 +0000)]
minor

12 years agominor
Andreas Müller [Tue, 10 Apr 2012 09:52:13 +0000 (09:52 +0000)]
minor

12 years agoadd references converter
Andreas Müller [Tue, 10 Apr 2012 09:37:39 +0000 (09:37 +0000)]
add references converter

12 years ago(no commit message)
Katja Luther [Tue, 10 Apr 2012 08:30:07 +0000 (08:30 +0000)]

12 years ago(no commit message)
Katja Luther [Tue, 10 Apr 2012 08:28:33 +0000 (08:28 +0000)]

12 years ago(no commit message)
Katja Luther [Tue, 10 Apr 2012 08:25:13 +0000 (08:25 +0000)]

12 years agoadd isLSID
Andreas Müller [Wed, 4 Apr 2012 19:27:54 +0000 (19:27 +0000)]
add isLSID

12 years agocommenting out @ignore
l.morris [Wed, 4 Apr 2012 17:06:27 +0000 (17:06 +0000)]
commenting out @ignore

12 years agotemp adding an @Ignore so cdmlib will build
l.morris [Wed, 4 Apr 2012 16:48:22 +0000 (16:48 +0000)]
temp adding an @Ignore so cdmlib will build

12 years agoupdates to DwcA import
Andreas Müller [Wed, 4 Apr 2012 15:19:13 +0000 (15:19 +0000)]
updates to DwcA import

12 years ago(no commit message)
l.morris [Wed, 4 Apr 2012 14:55:03 +0000 (14:55 +0000)]

12 years agominor
l.morris [Wed, 4 Apr 2012 14:07:21 +0000 (14:07 +0000)]
minor

12 years agominor
l.morris [Wed, 4 Apr 2012 13:40:00 +0000 (13:40 +0000)]
minor

12 years agominor
l.morris [Wed, 4 Apr 2012 13:05:12 +0000 (13:05 +0000)]
minor

12 years agominor
l.morris [Wed, 4 Apr 2012 12:37:04 +0000 (12:37 +0000)]
minor

12 years agomerge fix to css path from branch
l.morris [Wed, 4 Apr 2012 12:14:37 +0000 (12:14 +0000)]
merge fix to css path from branch

12 years agofixed path to link to URL
l.morris [Wed, 4 Apr 2012 11:17:59 +0000 (11:17 +0000)]
fixed path to link to URL

12 years agoreintegrating from vibrant_index branch after fixing paths
l.morris [Wed, 4 Apr 2012 08:41:01 +0000 (08:41 +0000)]
reintegrating from vibrant_index branch after fixing paths

12 years agofixed relative path
l.morris [Wed, 4 Apr 2012 08:35:53 +0000 (08:35 +0000)]
fixed relative path

12 years agominor
l.morris [Wed, 4 Apr 2012 08:35:00 +0000 (08:35 +0000)]
minor

12 years agoremoved absolute path to localhost
l.morris [Tue, 3 Apr 2012 17:21:40 +0000 (17:21 +0000)]
removed absolute path to localhost

12 years agomerging fixes to vibrant-index branch to trunk
l.morris [Tue, 3 Apr 2012 15:40:42 +0000 (15:40 +0000)]
merging fixes to vibrant-index branch to trunk

12 years agolatest developments for DwCA import
Andreas Müller [Tue, 3 Apr 2012 12:22:43 +0000 (12:22 +0000)]
latest developments for DwCA import

12 years agoreintegrating vibrant-index branch into trunk after merge.
l.morris [Tue, 3 Apr 2012 12:03:40 +0000 (12:03 +0000)]
reintegrating vibrant-index branch into trunk after merge.

12 years agominor
l.morris [Tue, 3 Apr 2012 11:24:33 +0000 (11:24 +0000)]
minor

12 years ago(no commit message)
l.morris [Tue, 3 Apr 2012 11:08:20 +0000 (11:08 +0000)]

12 years agominor
Andreas Müller [Fri, 30 Mar 2012 16:21:24 +0000 (16:21 +0000)]
minor