Andreas Müller [Thu, 8 Jun 2017 11:15:29 +0000 (13:15 +0200)]
ref #6535 fix calls to version number from other places
Andreas Kohlbecker [Thu, 8 Jun 2017 07:30:50 +0000 (09:30 +0200)]
fix #6502 reloading supplied term in service to avoid LIE
Andreas Müller [Thu, 8 Jun 2017 06:35:02 +0000 (08:35 +0200)]
minor
Andreas Müller [Thu, 8 Jun 2017 06:31:57 +0000 (08:31 +0200)]
ref #3734 remove ITermUpdaterStep.java and ITermUpdater
Andreas Müller [Wed, 7 Jun 2017 10:35:24 +0000 (12:35 +0200)]
minor
Andreas Müller [Wed, 7 Jun 2017 10:30:15 +0000 (12:30 +0200)]
ref #6535 fix strange bug in SQL that reads all records from CdmMetaData for propertyname = 0
Andreas Müller [Wed, 7 Jun 2017 09:48:57 +0000 (11:48 +0200)]
fix compile error in common service
Andreas Müller [Wed, 7 Jun 2017 08:28:02 +0000 (10:28 +0200)]
ref #6535 fix update script for renaming CdmMetaData.propertyName and remove old column
Katja Luther [Wed, 7 Jun 2017 07:40:49 +0000 (09:40 +0200)]
add check for existence of merge objects
Andreas Kohlbecker [Tue, 6 Jun 2017 10:52:57 +0000 (12:52 +0200)]
ref #6695, ref #5302 reverting commit
6c3443469
Andreas Kohlbecker [Tue, 6 Jun 2017 09:00:05 +0000 (11:00 +0200)]
adding missing delete method to CommonServiceImpl
Andreas Kohlbecker [Tue, 6 Jun 2017 08:58:55 +0000 (10:58 +0200)]
ref #6169 adding getService() method to CdmRepository
Andreas Müller [Tue, 6 Jun 2017 00:10:05 +0000 (02:10 +0200)]
ref #6661 some final updates for addInitials to person (length = 80 + handle ' in updatescript)
Andreas Müller [Mon, 5 Jun 2017 19:05:22 +0000 (21:05 +0200)]
cleanup
Andreas Müller [Mon, 5 Jun 2017 19:05:06 +0000 (21:05 +0200)]
fix hibernate search index path issue for remote-webapp tests
Andreas Müller [Mon, 5 Jun 2017 18:26:05 +0000 (20:26 +0200)]
minor changes to TcsRdf import
Andreas Müller [Mon, 5 Jun 2017 17:44:18 +0000 (19:44 +0200)]
ref #5817 update test data for rename RelationshipTermBase_inverseRepresentation
Andreas Müller [Mon, 5 Jun 2017 16:54:54 +0000 (18:54 +0200)]
update remote-webapp test H2 DB and some minor changes
Andreas Müller [Mon, 5 Jun 2017 16:35:55 +0000 (18:35 +0200)]
ref #6258, #6535, #3734 some updates to CdmUpdater after checking against H2
Andreas Müller [Mon, 5 Jun 2017 15:00:57 +0000 (17:00 +0200)]
fix #5149 remove UNIQUE index on Sequence_Reference.citations_id column
Andreas Müller [Mon, 5 Jun 2017 14:51:06 +0000 (16:51 +0200)]
fix #6226 delete orphaned keys and key statements
Andreas Müller [Mon, 5 Jun 2017 13:28:38 +0000 (15:28 +0200)]
fix #5817 rename RelationshipTermBase_inverseRepresentation
Andreas Müller [Mon, 5 Jun 2017 13:07:33 +0000 (15:07 +0200)]
fix #6340 update incorrect 'invalid' nomenclatural states
Andreas Müller [Mon, 5 Jun 2017 11:10:12 +0000 (13:10 +0200)]
fix #6472 add key as target for IntextReference
Andreas Müller [Mon, 5 Jun 2017 10:31:44 +0000 (12:31 +0200)]
ref #3665 adapt orginal spelling name cache strategy to user wishes, also ref #6630
Andreas Müller [Mon, 5 Jun 2017 10:06:02 +0000 (12:06 +0200)]
fix #5258 add accessed to WebPage cache strategy
Andreas Müller [Mon, 5 Jun 2017 09:01:21 +0000 (11:01 +0200)]
ref #6368 remove some further occurrences of ITaxonNameBase
Andreas Müller [Mon, 5 Jun 2017 08:33:47 +0000 (10:33 +0200)]
fix #6409 remove Ignores from ValidationTest, seems to be fixed by removing subclasses
Andreas Müller [Mon, 5 Jun 2017 07:53:58 +0000 (09:53 +0200)]
ref #6369 cleanup botanical name interface
Andreas Müller [Mon, 5 Jun 2017 07:25:38 +0000 (09:25 +0200)]
minor
Andreas Müller [Mon, 5 Jun 2017 07:25:24 +0000 (09:25 +0200)]
ref #6445 add isFungus to NomenclaturalCode
Andreas Müller [Sun, 4 Jun 2017 21:30:49 +0000 (23:30 +0200)]
ref #3734 fix compilation issue
Andreas Müller [Sun, 4 Jun 2017 20:59:08 +0000 (22:59 +0200)]
fix #3734 remove all TermUpdaters
Andreas Müller [Sun, 4 Jun 2017 20:16:31 +0000 (22:16 +0200)]
add commons-lang 3 to dependencies
Andreas Müller [Sun, 4 Jun 2017 20:15:55 +0000 (22:15 +0200)]
ref #4580 Add SchemaUpdateResult for schema updating
Andreas Müller [Sun, 4 Jun 2017 10:22:02 +0000 (12:22 +0200)]
remove generics from SchemaUpdaterStepBase
Andreas Müller [Sat, 3 Jun 2017 17:45:48 +0000 (19:45 +0200)]
ref 6368 fix compilation error in TaxonServiceImplTest
Andreas Müller [Sat, 3 Jun 2017 17:22:13 +0000 (19:22 +0200)]
minor
Andreas Müller [Mon, 22 May 2017 23:09:43 +0000 (01:09 +0200)]
ref #6368 , ref #6671, ref #6630 adapt eflora to no taxon name model
Andreas Müller [Mon, 22 May 2017 21:50:56 +0000 (23:50 +0200)]
ref #6630 and ref #6368 remove generics from TaxonName
Andreas Müller [Mon, 22 May 2017 12:55:35 +0000 (14:55 +0200)]
ref #6630 unified all taxon name cache strategies except for ViralNameDefaultCacheStrategy
Andreas Müller [Mon, 22 May 2017 11:07:11 +0000 (13:07 +0200)]
ref #6368 some adaptations after rebase
Andreas Müller [Mon, 8 May 2017 00:40:55 +0000 (02:40 +0200)]
fix #6368 rename table and class TaxonNameBase
Andreas Müller [Sat, 6 May 2017 09:37:14 +0000 (11:37 +0200)]
ref #6368 remove ZoologicalName in test DTYPE
Andreas Müller [Sat, 6 May 2017 09:35:55 +0000 (11:35 +0200)]
ref #6368 remove DTYPE from TaxonNameBase in update script
Andreas Müller [Sat, 6 May 2017 09:34:39 +0000 (11:34 +0200)]
ref #6368 remove BotanicalName in test DTYPE
Andreas Müller [Sat, 6 May 2017 09:25:51 +0000 (11:25 +0200)]
ref #6368 clean SetSpec
Andreas Müller [Sat, 6 May 2017 09:21:33 +0000 (11:21 +0200)]
ref #6368 remove some further occurrences of NonViralName
Andreas Müller [Sat, 6 May 2017 08:58:22 +0000 (10:58 +0200)]
ref #6368 update script for anamorphic
Andreas Müller [Sat, 6 May 2017 07:58:02 +0000 (09:58 +0200)]
ref #6368 remove TaxonNameBase subclasses
Andreas Müller [Sat, 3 Jun 2017 17:16:37 +0000 (19:16 +0200)]
Merge branch 'develop' into feature/cdm-4.7
Conflicts:
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Feature.java
Andreas Müller [Sat, 3 Jun 2017 16:53:32 +0000 (18:53 +0200)]
minor
Andreas Müller [Fri, 2 Jun 2017 12:15:01 +0000 (14:15 +0200)]
rename term to description in Feature again
Andreas Müller [Fri, 2 Jun 2017 12:11:44 +0000 (14:11 +0200)]
Revert "rename term to description in Feature"
This reverts commit
ce781a48f8801c3f2168cae24d3a67363a556a12 except for the wanted change
Andreas Müller [Fri, 2 Jun 2017 12:07:05 +0000 (14:07 +0200)]
rename term to description in Feature
Katja Luther [Thu, 1 Jun 2017 09:01:45 +0000 (11:01 +0200)]
updatedObjects should not be final
Katja Luther [Thu, 1 Jun 2017 08:59:26 +0000 (10:59 +0200)]
minor
Katja Luther [Thu, 1 Jun 2017 08:51:30 +0000 (10:51 +0200)]
adapt tests to return type updateResult and missing exception for update-services methods
Katja Luther [Thu, 1 Jun 2017 07:30:49 +0000 (09:30 +0200)]
change return type of changeSynonymToAcceptedTaxon to updateResult
Andreas Müller [Wed, 31 May 2017 17:42:53 +0000 (19:42 +0200)]
also copy appended phrase when changing synonym to taxon relation
Andreas Müller [Wed, 31 May 2017 14:41:16 +0000 (16:41 +0200)]
cleanup
Andreas Müller [Wed, 31 May 2017 14:40:58 +0000 (16:40 +0200)]
ref #6138 handle ClearDB_with_Terms_DataSet.xml correctly
Katja Luther [Wed, 31 May 2017 11:51:10 +0000 (13:51 +0200)]
ref #6527: define default for media deletion
Patrick Plitzner [Tue, 30 May 2017 10:47:17 +0000 (12:47 +0200)]
Add propertyPath to service method
Katja Luther [Tue, 30 May 2017 06:58:56 +0000 (08:58 +0200)]
fix #6138: add empty dataset to resources
Katja Luther [Mon, 29 May 2017 13:03:17 +0000 (15:03 +0200)]
fix #6138: add dataset to test to fix the test
Andreas Müller [Sun, 21 May 2017 22:27:50 +0000 (00:27 +0200)]
fix #6663 add attributes for externally managed references
Andreas Müller [Sun, 21 May 2017 20:33:37 +0000 (22:33 +0200)]
fix #6662 adapt person formatting, put initials to end
Andreas Müller [Sun, 21 May 2017 17:36:15 +0000 (19:36 +0200)]
cleanup
Andreas Müller [Sun, 21 May 2017 17:25:26 +0000 (19:25 +0200)]
fix #6661 add initials to Person
Andreas Müller [Sat, 20 May 2017 23:00:10 +0000 (01:00 +0200)]
fix #6660 remove unique index for rights
Andreas Müller [Sat, 20 May 2017 21:28:19 +0000 (23:28 +0200)]
Merge branch 'develop' into feature/cdm-4.7
Andreas Müller [Sat, 20 May 2017 15:05:27 +0000 (17:05 +0200)]
ref #5744 update deduplication helper for Institutions and Rights
Andreas Müller [Sat, 20 May 2017 06:31:54 +0000 (08:31 +0200)]
make status present uuid public
Andreas Müller [Sat, 20 May 2017 06:31:27 +0000 (08:31 +0200)]
add diaresis characters to UTF8
Andreas Müller [Fri, 19 May 2017 12:50:55 +0000 (14:50 +0200)]
fix #6656 fix test encoding
Andreas Müller [Fri, 19 May 2017 12:04:35 +0000 (14:04 +0200)]
ref #6535 add quotation marks for hardcoded SQL propertyname parameter
Andreas Müller [Fri, 19 May 2017 11:47:48 +0000 (13:47 +0200)]
fix missing includeSynonym parameter in taxaByName search
Andreas Müller [Fri, 19 May 2017 11:12:23 +0000 (13:12 +0200)]
fix #6656 make autonym hybrids parsable
Andreas Müller [Fri, 19 May 2017 10:31:03 +0000 (12:31 +0200)]
cleanup
Andreas Kohlbecker [Wed, 17 May 2017 15:37:28 +0000 (17:37 +0200)]
removing useless configuration of cdmlib-services as osgi bundle project
Andreas Kohlbecker [Wed, 17 May 2017 15:22:28 +0000 (17:22 +0200)]
ref #6169 adding default orderhints for user and institution
Katja Luther [Wed, 17 May 2017 08:53:39 +0000 (10:53 +0200)]
ref #6636: IOResultBase needs to implement Serializable
jenkins [Tue, 16 May 2017 11:15:17 +0000 (13:15 +0200)]
Updating develop poms back to pre merge state
jenkins [Tue, 16 May 2017 11:15:17 +0000 (13:15 +0200)]
Merge branch 'master' into develop
jenkins [Tue, 16 May 2017 11:15:16 +0000 (13:15 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Tue, 16 May 2017 11:15:12 +0000 (13:15 +0200)]
Merge branch 'release/4.7.0'
jenkins [Tue, 16 May 2017 10:58:31 +0000 (12:58 +0200)]
updating poms for branch'release/4.7.0' with non-snapshot versions
Andreas Müller [Tue, 16 May 2017 10:23:47 +0000 (12:23 +0200)]
ref #6286 correct spelling for life-form
(cherry picked from commit
1d24115987d15939f1b79bafabae5b326d0fe1d2)
jenkins [Tue, 16 May 2017 10:16:34 +0000 (12:16 +0200)]
updating poms for 4.8.0-SNAPSHOT development
Andreas Müller [Tue, 16 May 2017 09:52:08 +0000 (11:52 +0200)]
ref #6636: try to fix BOM issue in RIS byte array
Andreas Müller [Tue, 16 May 2017 09:32:03 +0000 (11:32 +0200)]
ref #6636: try to fix encoding issue in RIS
Andreas Müller [Tue, 16 May 2017 09:28:58 +0000 (11:28 +0200)]
ref #6636: try to improve debugging for RIS import
Andreas Müller [Tue, 16 May 2017 09:12:05 +0000 (11:12 +0200)]
ref #6636: try to improve debugging for RIS import
Andreas Müller [Tue, 16 May 2017 08:53:50 +0000 (10:53 +0200)]
ref #6636: try to fix test for RIS import
Katja Luther [Tue, 16 May 2017 08:22:06 +0000 (10:22 +0200)]
adapt test
Katja Luther [Tue, 16 May 2017 07:07:20 +0000 (09:07 +0200)]
ref #6636: adapt RIS Import for use in Editor
Andreas Müller [Mon, 15 May 2017 22:52:33 +0000 (00:52 +0200)]
ref #6636 handle Books correctly in RIS import
Andreas Müller [Sun, 14 May 2017 21:15:50 +0000 (23:15 +0200)]
minor
Andreas Müller [Sun, 14 May 2017 21:15:32 +0000 (23:15 +0200)]
ref #6636 further improvements to RIS import