cdmlib.git
14 months agocleanup
Andreas Müller [Sat, 10 Jun 2023 17:31:17 +0000 (19:31 +0200)]
cleanup

15 months agocleanup
Andreas Müller [Sat, 10 Jun 2023 17:26:13 +0000 (19:26 +0200)]
cleanup

15 months agocleanup
Andreas Müller [Sat, 10 Jun 2023 15:40:14 +0000 (17:40 +0200)]
cleanup

15 months agocleanup
Andreas Müller [Sat, 10 Jun 2023 09:17:13 +0000 (11:17 +0200)]
cleanup

15 months agocleanup
Andreas Müller [Sat, 10 Jun 2023 08:35:50 +0000 (10:35 +0200)]
cleanup

15 months agoref #10335 fix NPE in TermNodeDto
Andreas Müller [Sat, 10 Jun 2023 08:34:06 +0000 (10:34 +0200)]
ref #10335 fix NPE in TermNodeDto

15 months agoref #10326 javadoc and further tests
Andreas Müller [Fri, 9 Jun 2023 22:26:46 +0000 (00:26 +0200)]
ref #10326 javadoc and further tests

15 months agoref #10326 try to fix incorrect alternativeRootArea handling
Andreas Müller [Fri, 9 Jun 2023 21:48:02 +0000 (23:48 +0200)]
ref #10326 try to fix incorrect alternativeRootArea handling

15 months agocleanup
Andreas Müller [Fri, 9 Jun 2023 20:29:10 +0000 (22:29 +0200)]
cleanup

15 months agoref #10326 add alternativeRootNodeMarkerType uuid to MarkerType
Andreas Müller [Fri, 9 Jun 2023 20:28:30 +0000 (22:28 +0200)]
ref #10326 add alternativeRootNodeMarkerType  uuid to MarkerType

15 months agorename CdmBase.isPersited -> isPersisted in cdmlib
Andreas Müller [Thu, 8 Jun 2023 19:27:35 +0000 (21:27 +0200)]
rename CdmBase.isPersited -> isPersisted in cdmlib

15 months agoref #10322 by default use distribution treeDto
Andreas Müller [Thu, 8 Jun 2023 16:26:55 +0000 (18:26 +0200)]
ref #10322 by default use distribution treeDto

15 months agoUpdating develop poms back to pre merge state
jenkins [Thu, 8 Jun 2023 15:42:18 +0000 (17:42 +0200)]
Updating develop poms back to pre merge state

15 months agoMerge branch 'master' into develop
jenkins [Thu, 8 Jun 2023 15:42:16 +0000 (17:42 +0200)]
Merge branch 'master' into develop

15 months agoupdating develop poms to master versions to avoid merge conflicts
jenkins [Thu, 8 Jun 2023 15:42:15 +0000 (17:42 +0200)]
updating develop poms to master versions to avoid merge conflicts

15 months agoMerge branch 'release/5.38.0' 5.38.0
jenkins [Thu, 8 Jun 2023 15:42:09 +0000 (17:42 +0200)]
Merge branch 'release/5.38.0'

15 months agoupdating poms for branch'release/5.38.0' with non-snapshot versions
jenkins [Thu, 8 Jun 2023 15:28:32 +0000 (17:28 +0200)]
updating poms for branch'release/5.38.0' with non-snapshot versions

15 months agoupdating poms for 5.39.0-SNAPSHOT development
jenkins [Thu, 8 Jun 2023 14:25:43 +0000 (16:25 +0200)]
updating poms for 5.39.0-SNAPSHOT development

15 months agoref #9640 cleanup and add Chapter F 2019
Andreas Müller [Thu, 8 Jun 2023 14:23:39 +0000 (16:23 +0200)]
ref #9640 cleanup and add Chapter F 2019

15 months agoref #9640 fix forCode tests
Andreas Müller [Thu, 8 Jun 2023 13:24:18 +0000 (15:24 +0200)]
ref #9640 fix forCode tests

15 months agoref #9640 add some more codes to the NomenclaturalCodeEdition enum and add publicatio...
Andreas Müller [Thu, 8 Jun 2023 13:17:10 +0000 (15:17 +0200)]
ref #9640 add some more codes to the NomenclaturalCodeEdition enum and add publication year

15 months agoref #9640, ref #10302 implement NomenclaturalCodeEdition.toString same as label
Andreas Müller [Thu, 8 Jun 2023 11:48:00 +0000 (13:48 +0200)]
ref #9640, ref #10302 implement NomenclaturalCodeEdition.toString same as label

15 months agocleanup
Andreas Müller [Thu, 8 Jun 2023 11:47:27 +0000 (13:47 +0200)]
cleanup

15 months agoref #9640, ref #10302 remove pages as they are not part of the official "how to cite"
Andreas Müller [Thu, 8 Jun 2023 11:33:12 +0000 (13:33 +0200)]
ref #9640, ref #10302 remove pages as they are not part of the official "how to cite"

15 months agoref #9640, ref #10302 add citation data for St Louis Code
Andreas Müller [Thu, 8 Jun 2023 10:31:35 +0000 (12:31 +0200)]
ref #9640, ref #10302 add citation data for St Louis Code

15 months agoref #9640, ref #10302 add citation data for 2011 and 2005 codes
Andreas Müller [Thu, 8 Jun 2023 09:47:42 +0000 (11:47 +0200)]
ref #9640, ref #10302 add citation data for 2011 and 2005 codes

15 months agoref #10326 handle alternativeRootArea in condensedDistrString
Andreas Müller [Wed, 7 Jun 2023 22:05:26 +0000 (00:05 +0200)]
ref #10326 handle alternativeRootArea in condensedDistrString

15 months agocleanup
Andreas Müller [Wed, 7 Jun 2023 22:02:41 +0000 (00:02 +0200)]
cleanup

15 months agoref #10326 fix root switch and check empty and some javadoc
Andreas Müller [Wed, 7 Jun 2023 20:51:00 +0000 (22:51 +0200)]
ref #10326 fix root switch and check empty and some javadoc

15 months agoref #10326 handle alternativeRootArea in non-DTO based distribution tree (cont.)
Andreas Müller [Wed, 7 Jun 2023 19:39:01 +0000 (21:39 +0200)]
ref #10326 handle alternativeRootArea in non-DTO based distribution tree (cont.)

15 months agorevert unwanted cleanup changes
Andreas Müller [Wed, 7 Jun 2023 19:37:23 +0000 (21:37 +0200)]
revert unwanted cleanup changes

15 months agoref #10326 handle alternativeRootArea in non-DTO based distribution tree
Andreas Müller [Wed, 7 Jun 2023 19:31:23 +0000 (21:31 +0200)]
ref #10326 handle alternativeRootArea in non-DTO based distribution tree

15 months agocleanup (cont.)
Andreas Müller [Wed, 7 Jun 2023 19:30:45 +0000 (21:30 +0200)]
cleanup (cont.)

15 months agoref #10326 handle alternativeRootArea in DTO based distribution tree
Andreas Müller [Wed, 7 Jun 2023 19:13:55 +0000 (21:13 +0200)]
ref #10326 handle alternativeRootArea in DTO based distribution tree

15 months agocleanup
Andreas Müller [Wed, 7 Jun 2023 19:05:15 +0000 (21:05 +0200)]
cleanup

15 months agoref #9640, ref #10302 add uuid from phycobank reference to Shenzhen code
Andreas Müller [Wed, 7 Jun 2023 11:57:22 +0000 (13:57 +0200)]
ref #9640, ref #10302 add uuid from phycobank reference to Shenzhen code

15 months agocleanup (rename hiddenArea->fallbackArea) and others
Andreas Müller [Wed, 7 Jun 2023 11:56:15 +0000 (13:56 +0200)]
cleanup (rename hiddenArea->fallbackArea) and others

15 months agoref #9640, ref #10302 add codeEditon source to webservice
Andreas Müller [Wed, 7 Jun 2023 09:17:09 +0000 (11:17 +0200)]
ref #9640, ref #10302 add codeEditon source to webservice

15 months agoref #9640, ref #10302 add citation and source to NomenclaturalCodeEdition, at least...
Andreas Müller [Tue, 6 Jun 2023 22:04:37 +0000 (00:04 +0200)]
ref #9640, ref #10302 add citation and source to NomenclaturalCodeEdition, at least for Shenzhen 2017

15 months agoref #10335: add CdmBaseDto Interface
Katja Luther [Tue, 6 Jun 2023 19:51:54 +0000 (21:51 +0200)]
ref #10335: add CdmBaseDto Interface

15 months agojavadoc
Andreas Müller [Tue, 6 Jun 2023 14:01:51 +0000 (16:01 +0200)]
javadoc

15 months agoref #10327 fix iucn config handling
Andreas Müller [Mon, 5 Jun 2023 15:34:20 +0000 (17:34 +0200)]
ref #10327 fix iucn config handling

15 months agocleanup
Andreas Müller [Mon, 5 Jun 2023 14:08:17 +0000 (16:08 +0200)]
cleanup

15 months agoref #10327 taxon portal dto loader uses iucn distr info
Andreas Müller [Mon, 5 Jun 2023 13:19:38 +0000 (15:19 +0200)]
ref #10327 taxon portal dto loader uses iucn distr info

15 months agominor
Andreas Müller [Mon, 5 Jun 2023 12:21:10 +0000 (14:21 +0200)]
minor

15 months agoref #10327 first IUCN distribution string implementation
Andreas Müller [Mon, 5 Jun 2023 10:58:34 +0000 (12:58 +0200)]
ref #10327 first IUCN distribution string implementation

15 months agoref #10335: create AnnotationDto and MarkerDto and handle them when
Katja Luther [Mon, 5 Jun 2023 13:12:24 +0000 (15:12 +0200)]
ref #10335: create AnnotationDto and MarkerDto and handle them when
saving nodes

15 months agorename fallbackAreaMarker in configuration
Andreas Müller [Mon, 5 Jun 2023 07:57:12 +0000 (09:57 +0200)]
rename fallbackAreaMarker in configuration

15 months agoref #10336remove default value for etAl from taxon page service
Andreas Müller [Thu, 1 Jun 2023 17:33:10 +0000 (19:33 +0200)]
ref #10336remove default value for etAl from taxon page service

15 months agoCleanup
Andreas Müller [Thu, 1 Jun 2023 15:42:27 +0000 (17:42 +0200)]
Cleanup

15 months agofix #10222 remove elements from parts set to avoid model instances to be returned
Andreas Müller [Wed, 31 May 2023 10:50:26 +0000 (12:50 +0200)]
fix #10222 remove elements from parts set to avoid model instances to be returned

15 months agofix #10341 add source type "internal"
Andreas Müller [Wed, 31 May 2023 07:01:44 +0000 (09:01 +0200)]
fix #10341 add source type "internal"

15 months agoref #10206 add hibernate search annotations to DescriptionBase.publish
Andreas Müller [Tue, 30 May 2023 18:42:45 +0000 (20:42 +0200)]
ref #10206 add hibernate search annotations to DescriptionBase.publish

15 months agoref #10241 fix tests in other test classes
Andreas Müller [Tue, 30 May 2023 17:46:02 +0000 (19:46 +0200)]
ref #10241 fix tests in other test classes

15 months agoref #10241 handle all modifiers for formatting quantitative data and categorical...
Andreas Müller [Tue, 30 May 2023 17:13:29 +0000 (19:13 +0200)]
ref #10241 handle all modifiers for formatting quantitative data and categorical data

15 months agoref #4484, #8424, #9559, #10222, #10322 remove unpublished specimens from taxon page...
Andreas Müller [Tue, 30 May 2023 15:40:57 +0000 (17:40 +0200)]
ref #4484, #8424, #9559, #10222, #10322 remove unpublished specimens from taxon page webservice

15 months agoref #10334 implement Description publish flag for taxon page webservice
Andreas Müller [Tue, 30 May 2023 15:34:12 +0000 (17:34 +0200)]
ref #10334 implement Description publish flag for taxon page  webservice

15 months agoref #10206 add IPublishable to DescriptionBase
Andreas Müller [Tue, 30 May 2023 15:22:30 +0000 (17:22 +0200)]
ref #10206 add IPublishable to DescriptionBase

15 months agoref #10178: new methods for normalization of names
Belen Escobari [Tue, 30 May 2023 13:29:32 +0000 (15:29 +0200)]
ref #10178: new methods for normalization of names

15 months agoupdate test H2 in cdmlib
Andreas Müller [Tue, 30 May 2023 12:14:29 +0000 (14:14 +0200)]
update test H2 in cdmlib

15 months agoupdate test H2 in cdmlib
Andreas Müller [Tue, 30 May 2023 12:10:37 +0000 (14:10 +0200)]
update test H2 in cdmlib

15 months agoref #10337 further adapt recommendedXXX in Feature to use term collections
Andreas Müller [Tue, 30 May 2023 11:47:16 +0000 (13:47 +0200)]
ref #10337 further adapt recommendedXXX in Feature to use term collections

15 months agoref #10320 adapt update script for annotatable TermRelationBase
Andreas Müller [Tue, 30 May 2023 09:12:02 +0000 (11:12 +0200)]
ref #10320 adapt update script for annotatable TermRelationBase

15 months agofix #10311 assymmetry for misspelling and emendation
Andreas Müller [Tue, 30 May 2023 08:48:45 +0000 (10:48 +0200)]
fix #10311 assymmetry for misspelling and emendation

15 months agoref #10320 adapt test schema to annotatable TermRelationBase (cont. 2)
Andreas Müller [Sun, 28 May 2023 22:59:21 +0000 (00:59 +0200)]
ref #10320 adapt test schema to annotatable TermRelationBase (cont. 2)

15 months agominor
Andreas Müller [Sun, 28 May 2023 11:25:29 +0000 (13:25 +0200)]
minor

15 months agocleanup
Andreas Müller [Sun, 28 May 2023 08:54:50 +0000 (10:54 +0200)]
cleanup

15 months agoref #10320 adapt test schema to annotatable TermRelationBase (cont.)
Andreas Müller [Sun, 28 May 2023 08:53:57 +0000 (10:53 +0200)]
ref #10320 adapt test schema to annotatable TermRelationBase (cont.)

15 months agoref #10328 add maxXXX to jaxb
Andreas Müller [Sun, 28 May 2023 08:45:30 +0000 (10:45 +0200)]
ref #10328 add maxXXX to jaxb

15 months agoref #10206 add publish flag to description base
Andreas Müller [Sun, 28 May 2023 08:13:40 +0000 (10:13 +0200)]
ref #10206 add publish flag to description base

15 months agocleanup
Andreas Müller [Sun, 28 May 2023 07:56:54 +0000 (09:56 +0200)]
cleanup

15 months agoref #10328 add maxXXX to Feature
Andreas Müller [Sun, 28 May 2023 07:56:12 +0000 (09:56 +0200)]
ref #10328 add maxXXX to Feature

15 months agoref #10320 adapt test schema to annotatable TermRelationBase
Andreas Müller [Sun, 28 May 2023 07:39:17 +0000 (09:39 +0200)]
ref #10320 adapt test schema to annotatable TermRelationBase

15 months agojavadoc
Andreas Müller [Sun, 28 May 2023 07:34:36 +0000 (09:34 +0200)]
javadoc

15 months agoref #10320 let TermRelationBase inherit from AnnotableEntity
Andreas Müller [Sun, 28 May 2023 07:22:10 +0000 (09:22 +0200)]
ref #10320 let TermRelationBase inherit from AnnotableEntity

15 months agoupgrade metaData and schema updater to 5.38.0
Andreas Müller [Sun, 28 May 2023 07:20:36 +0000 (09:20 +0200)]
upgrade metaData and schema updater to 5.38.0

15 months agoref #10337 fix httpTermCollectionService
Andreas Müller [Tue, 30 May 2023 10:24:09 +0000 (12:24 +0200)]
ref #10337 fix httpTermCollectionService

15 months agorelated to #10337 add list(Set<TermType>) to vocabulary service
Andreas Müller [Tue, 30 May 2023 09:39:27 +0000 (11:39 +0200)]
related to #10337 add list(Set<TermType>) to vocabulary service

15 months agoref #10337 add list(Set<TermType>) to collection service
Andreas Müller [Tue, 30 May 2023 09:39:04 +0000 (11:39 +0200)]
ref #10337 add list(Set<TermType>) to collection service

15 months agoref #10337 add term collection service to httpInvokerServices
Andreas Müller [Tue, 30 May 2023 09:13:25 +0000 (11:13 +0200)]
ref #10337 add term collection service to httpInvokerServices

15 months agocleanup
Andreas Müller [Tue, 30 May 2023 09:12:53 +0000 (11:12 +0200)]
cleanup

15 months agoref #10337 add term collection service
Andreas Müller [Tue, 30 May 2023 08:03:00 +0000 (10:03 +0200)]
ref #10337 add term collection service

15 months agoref #10337 make recommendedModifierEnumeration and supportedCategoricalEnumerations...
Andreas Müller [Mon, 29 May 2023 20:29:14 +0000 (22:29 +0200)]
ref #10337 make recommendedModifierEnumeration and supportedCategoricalEnumerations term collections in cdmlib (cont.)

15 months agoref #10337 make recommendedModifierEnumeration and supportedCategoricalEnumerations...
Andreas Müller [Sun, 28 May 2023 23:22:33 +0000 (01:22 +0200)]
ref #10337 make recommendedModifierEnumeration and supportedCategoricalEnumerations term collections in cdmlib

15 months agocleanup
Andreas Müller [Sun, 28 May 2023 18:05:04 +0000 (20:05 +0200)]
cleanup

15 months agoref #9771 allow lists and sets as term graph imput
Andreas Müller [Sun, 28 May 2023 18:04:41 +0000 (20:04 +0200)]
ref #9771 allow lists and sets as term graph imput

15 months agominor
Andreas Müller [Sun, 28 May 2023 15:02:10 +0000 (17:02 +0200)]
minor

15 months agoref #10222 filter unpublished synonyms
Andreas Müller [Sun, 28 May 2023 15:00:02 +0000 (17:00 +0200)]
ref  #10222  filter unpublished synonyms

15 months agoref #10222 error handling and some javadoc
Andreas Müller [Sun, 28 May 2023 14:57:41 +0000 (16:57 +0200)]
ref  #10222  error handling and some javadoc

15 months agoref #10322, #10222 add doXXX parameters
Andreas Müller [Sun, 28 May 2023 14:29:17 +0000 (16:29 +0200)]
ref #10322, #10222  add doXXX parameters

15 months agoref #10222 fix load description sources with facts
Andreas Müller [Sun, 28 May 2023 13:46:51 +0000 (15:46 +0200)]
ref #10222 fix load description sources with facts

15 months agoref #10336, #10222: allow defining the authors et al. position
Andreas Müller [Sun, 28 May 2023 13:24:07 +0000 (15:24 +0200)]
ref #10336, #10222: allow defining the authors et al. position

15 months agominor
Andreas Müller [Sun, 28 May 2023 12:27:02 +0000 (14:27 +0200)]
minor

15 months agoref #10222 , ref #10322 add etAlPosition to DTO config
Andreas Müller [Sun, 28 May 2023 12:26:33 +0000 (14:26 +0200)]
ref #10222 , ref #10322 add etAlPosition to DTO config

15 months agoref #10222 load description sources with facts
Andreas Müller [Sun, 28 May 2023 11:27:13 +0000 (13:27 +0200)]
ref #10222 load description sources with facts

15 months agoref #9771 javadoc on single source issue
Andreas Müller [Sun, 28 May 2023 07:06:12 +0000 (09:06 +0200)]
ref #9771 javadoc on single source issue

15 months agoref #9771 fix empty VocabularyFilter handling
Andreas Müller [Sun, 28 May 2023 07:05:11 +0000 (09:05 +0200)]
ref #9771  fix empty VocabularyFilter handling

15 months agoref #10222, ref #10322 add statusTree as param to controller
Andreas Müller [Sun, 28 May 2023 07:02:38 +0000 (09:02 +0200)]
ref #10222, ref #10322 add statusTree as param to controller

15 months agoref #10299 add test for verbatim date formatting
Andreas Müller [Sun, 28 May 2023 06:56:23 +0000 (08:56 +0200)]
ref #10299 add test for verbatim date formatting

15 months agocleanup
Andreas Müller [Sun, 28 May 2023 06:55:48 +0000 (08:55 +0200)]
cleanup