Andreas Müller [Tue, 27 Nov 2018 13:31:05 +0000 (14:31 +0100)]
some renamings and javadoc
Katja Luther [Tue, 27 Nov 2018 13:11:46 +0000 (14:11 +0100)]
ref #7929: clear the member list in group when deleting the group
Andreas Kohlbecker [Thu, 22 Nov 2018 14:07:06 +0000 (15:07 +0100)]
initializing GatheringEvent.exactLocation to avoid LIE in UIs
Katja Luther [Thu, 22 Nov 2018 10:34:17 +0000 (11:34 +0100)]
ref #7922: add markertype for distribution editor descriptions
Patrick Plitzner [Thu, 22 Nov 2018 08:30:34 +0000 (09:30 +0100)]
ref #7837 Implement docx export
Andreas Kohlbecker [Wed, 21 Nov 2018 15:44:14 +0000 (16:44 +0100)]
ref #7918 harmonizing ReferencePropertyDefinitions with updated reference interface hierarchy and hiding date pulished when not needed
Andreas Müller [Tue, 20 Nov 2018 17:21:04 +0000 (18:21 +0100)]
minor
Andreas Müller [Tue, 20 Nov 2018 16:14:57 +0000 (17:14 +0100)]
some improvements to name parser for better BookSection identification
Andreas Müller [Tue, 20 Nov 2018 16:13:53 +0000 (17:13 +0100)]
add convenience methods for reference type
Andreas Müller [Tue, 20 Nov 2018 16:13:19 +0000 (17:13 +0100)]
ref #7914 add javadoc to IWithIsbn interface
Andreas Müller [Tue, 20 Nov 2018 16:12:44 +0000 (17:12 +0100)]
improve journal parser
Andreas Müller [Tue, 20 Nov 2018 16:12:02 +0000 (17:12 +0100)]
cleanup and javadoc
Andreas Müller [Tue, 20 Nov 2018 16:10:34 +0000 (17:10 +0100)]
fix #7915 move datePublished to subinterface IWithAuthorAndDate, remove from IJournal and IPrintSeries this way
Andreas Müller [Tue, 20 Nov 2018 14:30:05 +0000 (15:30 +0100)]
fix #7914 add ISBN to IProceedings (by adding new interface IWithIsbn)
Andreas Müller [Tue, 20 Nov 2018 14:23:49 +0000 (15:23 +0100)]
fix #7913 remove authorship from IJournal and IPrintSeries
Andreas Kohlbecker [Tue, 20 Nov 2018 15:54:25 +0000 (16:54 +0100)]
fixing NPE in Point and minor change in java doc to ReferencePropertyDefinitions
Andreas Kohlbecker [Mon, 19 Nov 2018 16:59:47 +0000 (17:59 +0100)]
adding iReport to ReferencePropertyDefinitions - 2
Andreas Kohlbecker [Mon, 19 Nov 2018 16:58:38 +0000 (17:58 +0100)]
adding iReport to ReferencePropertyDefinitions
Andreas Müller [Mon, 19 Nov 2018 11:57:32 +0000 (12:57 +0100)]
ref #7217 add double apostrophe as second marker
Andreas Müller [Mon, 12 Nov 2018 16:06:21 +0000 (17:06 +0100)]
ref #7902, ref #7901 add generic to allow return types for defaultValue and to allow toString and fromString methods
Andreas Kohlbecker [Mon, 19 Nov 2018 10:52:15 +0000 (11:52 +0100)]
ref #7217 creating test to reproduce long lat parsing problem
Andreas Kohlbecker [Mon, 19 Nov 2018 10:37:49 +0000 (11:37 +0100)]
CoordinateConverterTest using unicode constants for all signs
Katja Luther [Mon, 19 Nov 2018 08:37:04 +0000 (09:37 +0100)]
code cleaning, removing system.err...
Patrick Plitzner [Fri, 16 Nov 2018 13:05:50 +0000 (14:05 +0100)]
ref #7760 Add collection code to citation
Andreas Kohlbecker [Fri, 16 Nov 2018 12:26:07 +0000 (13:26 +0100)]
ref #7600 removing EntityCollectionSetterAdapter fields from Team and AnnotatableEntity since it no longer caches Methods
Andreas Kohlbecker [Thu, 15 Nov 2018 15:46:08 +0000 (16:46 +0100)]
ref #7600 EntityCollectionSetterAdapter no longer caching Methods to be serializable
Andreas Kohlbecker [Thu, 15 Nov 2018 15:14:40 +0000 (16:14 +0100)]
ref #7600 EntityCollectionSetterAdapter serializable
Patrick Plitzner [Thu, 15 Nov 2018 14:13:42 +0000 (15:13 +0100)]
Return created feature node instead of feature tree
Andreas Kohlbecker [Thu, 15 Nov 2018 13:50:12 +0000 (14:50 +0100)]
ref #7600 adding usage example to EntityCollectionSetterAdapter doc
Andreas Kohlbecker [Thu, 15 Nov 2018 13:24:37 +0000 (14:24 +0100)]
ref #7600 renaming arument in EntityCollectionSetterAdapter
Andreas Kohlbecker [Thu, 15 Nov 2018 13:23:37 +0000 (14:23 +0100)]
ref #7600 using EntityCollectionSetterAdapter for AnnotatableEntity.annotations
Andreas Kohlbecker [Thu, 15 Nov 2018 13:23:09 +0000 (14:23 +0100)]
ref #7600 using EntityCollectionSetterAdapter for Team.teamMembers - adding @XmlTransient to member field teamMembersSetterAdapter
Andreas Kohlbecker [Thu, 15 Nov 2018 12:19:26 +0000 (13:19 +0100)]
ref #7600 using EntityCollectionSetterAdapter for Team.teamMembers
Andreas Kohlbecker [Thu, 15 Nov 2018 12:18:59 +0000 (13:18 +0100)]
ref #7600 EntityCollectionSetterAdapter implemented
Andreas Kohlbecker [Tue, 13 Nov 2018 14:11:35 +0000 (15:11 +0100)]
fixing LazyInitializationException
Patrick Plitzner [Tue, 13 Nov 2018 12:27:05 +0000 (13:27 +0100)]
ref #7887 Return newly created DTO from service method
Patrick Plitzner [Tue, 13 Nov 2018 10:19:52 +0000 (11:19 +0100)]
ref #7887 Set parent DTOs during initialization
Patrick Plitzner [Tue, 13 Nov 2018 10:02:00 +0000 (11:02 +0100)]
ref #7887 Add "parent" DTOs to TermDto
Patrick Plitzner [Tue, 13 Nov 2018 09:26:59 +0000 (10:26 +0100)]
ref #7887 Refactor TermDto usage
Patrick Plitzner [Tue, 13 Nov 2018 08:04:11 +0000 (09:04 +0100)]
ref #7887 Remove getParent()
Andreas Kohlbecker [Tue, 13 Nov 2018 08:19:01 +0000 (09:19 +0100)]
ref #7900 reverting : read-only transactions in DTO service with Propagation.REQUIRES_NEW
Andreas Kohlbecker [Mon, 12 Nov 2018 16:06:57 +0000 (17:06 +0100)]
ref #7900 read-only transactions in DTO service with Propagation.REQUIRES_NEW
Andreas Müller [Mon, 12 Nov 2018 15:49:30 +0000 (16:49 +0100)]
ref #7901 implement IPreferencePredicate in CdmPreference and service layer
Andreas Müller [Mon, 12 Nov 2018 15:48:15 +0000 (16:48 +0100)]
ref #7901, ref #7902 Create IPreferencePredicate and include getDefaultValue
Andreas Müller [Fri, 9 Nov 2018 19:34:03 +0000 (20:34 +0100)]
ref #7800 further parsing for volume and edition part and for some special title parts
Andreas Müller [Fri, 9 Nov 2018 15:33:38 +0000 (16:33 +0100)]
ref #7800 2nd fix tests with special characters
Andreas Müller [Fri, 9 Nov 2018 14:50:55 +0000 (15:50 +0100)]
ref #7800 fix tests with special characters
Andreas Müller [Fri, 9 Nov 2018 14:02:22 +0000 (15:02 +0100)]
ref #7800 improve parsing of details and reference titles
Patrick Plitzner [Fri, 9 Nov 2018 08:18:11 +0000 (09:18 +0100)]
ref #7887 Implement term service methods based on DTOs
Andreas Müller [Thu, 8 Nov 2018 14:46:08 +0000 (15:46 +0100)]
try to fix CCE when using OrderedTermVocabulary.getSortedSetOfTerms
Andreas Müller [Thu, 8 Nov 2018 14:33:46 +0000 (15:33 +0100)]
try to fix CCE when using OrderedTermVocabulary.getEqualTerms
Andreas Müller [Thu, 8 Nov 2018 11:27:06 +0000 (12:27 +0100)]
ref #7894 add E+M sourceNumber voc uuid
Andreas Müller [Thu, 8 Nov 2018 11:21:37 +0000 (12:21 +0100)]
cleanup
Andreas Müller [Thu, 8 Nov 2018 11:20:54 +0000 (12:20 +0100)]
ref #7829, ref #7800 improve nom. ref. matcher (also changes the result type => needs adaptation in client Apps)
Andreas Müller [Thu, 8 Nov 2018 11:10:26 +0000 (12:10 +0100)]
revert: Add series parsing with letters (test) - all unwanted commits
Andreas Müller [Thu, 8 Nov 2018 11:04:39 +0000 (12:04 +0100)]
Add series parsing with letters (test)
Andreas Müller [Thu, 8 Nov 2018 10:59:08 +0000 (11:59 +0100)]
add parsing of brackets with "&"
Andreas Müller [Thu, 8 Nov 2018 10:57:55 +0000 (11:57 +0100)]
Add series parsing with letters
Andreas Müller [Thu, 8 Nov 2018 10:56:50 +0000 (11:56 +0100)]
add regEx negation to UTF8
Andreas Müller [Thu, 8 Nov 2018 09:47:43 +0000 (10:47 +0100)]
fix parser test
Andreas Müller [Thu, 8 Nov 2018 09:19:19 +0000 (10:19 +0100)]
some improvements to NonViralNameParser
Andreas Müller [Thu, 8 Nov 2018 09:16:06 +0000 (10:16 +0100)]
cleanup
Andreas Müller [Fri, 2 Nov 2018 12:14:11 +0000 (13:14 +0100)]
ref #7429 fix order in "publ." parsing and implement for nom. ref. parser
Andreas Müller [Fri, 2 Nov 2018 12:11:38 +0000 (13:11 +0100)]
cleanup
Andreas Kohlbecker [Wed, 7 Nov 2018 14:51:29 +0000 (15:51 +0100)]
ref #7884 ref #7890 fixing NPE in name controllers
Andreas Kohlbecker [Wed, 7 Nov 2018 11:16:58 +0000 (12:16 +0100)]
ref #7884 ref #7890 fixing LIE in name controllers regarding name relations
Andreas Kohlbecker [Fri, 26 Oct 2018 15:40:37 +0000 (17:40 +0200)]
fix #7874 updating also the nomenclaturalTitle in updateTitleCacheForSingleEntity()
jenkins [Thu, 25 Oct 2018 12:43:39 +0000 (14:43 +0200)]
Updating develop poms back to pre merge state
jenkins [Thu, 25 Oct 2018 12:43:38 +0000 (14:43 +0200)]
Merge branch 'master' into develop
jenkins [Thu, 25 Oct 2018 12:43:37 +0000 (14:43 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Thu, 25 Oct 2018 12:43:33 +0000 (14:43 +0200)]
Merge branch 'release/5.4.0'
jenkins [Thu, 25 Oct 2018 12:26:04 +0000 (14:26 +0200)]
updating poms for branch'release/5.4.0' with non-snapshot versions
jenkins [Thu, 25 Oct 2018 12:03:12 +0000 (14:03 +0200)]
updating poms for 5.5.0-SNAPSHOT development
Andreas Müller [Thu, 25 Oct 2018 08:18:11 +0000 (10:18 +0200)]
cleanup
Andreas Müller [Thu, 25 Oct 2018 08:17:56 +0000 (10:17 +0200)]
ref #7283 fix NPE in AlternativeIdentifier constructor if no type is given
Andreas Müller [Wed, 24 Oct 2018 11:31:51 +0000 (13:31 +0200)]
#7859 reverted max size for Pref.value. Test failed, need to check why we have the test.
Andreas Müller [Wed, 24 Oct 2018 10:58:51 +0000 (12:58 +0200)]
#7859 Changed length to 2000. Still need update script
Andreas Müller [Wed, 24 Oct 2018 10:54:03 +0000 (12:54 +0200)]
cleanup
Andreas Müller [Wed, 24 Oct 2018 08:08:14 +0000 (10:08 +0200)]
#7849 set allow override to true as default in cdmlib CdmPreference
Andreas Kohlbecker [Tue, 23 Oct 2018 09:41:06 +0000 (11:41 +0200)]
ref #7831 using uuids in findTaxonNameParts() methods as name exclude filter - NPE fix
Andreas Kohlbecker [Mon, 22 Oct 2018 15:40:14 +0000 (17:40 +0200)]
ref #7831 using uuids in findTaxonNameParts() methods as name exclude filter
Andreas Kohlbecker [Mon, 22 Oct 2018 15:06:01 +0000 (17:06 +0200)]
ref #7791 adding rank order index to TaxonGraphNodeDTO
Andreas Kohlbecker [Mon, 22 Oct 2018 15:05:17 +0000 (17:05 +0200)]
ref #7834 bugfix: returning empty page when no name matches
Andreas Kohlbecker [Fri, 19 Oct 2018 16:03:30 +0000 (18:03 +0200)]
ref #7834 avoiding NPE in case of names which are not in the graph
Andreas Kohlbecker [Fri, 19 Oct 2018 11:44:25 +0000 (13:44 +0200)]
fix #7779 fixing missing file extension in StaticSwaggerApiDoc controller
Andreas Kohlbecker [Fri, 19 Oct 2018 09:41:55 +0000 (11:41 +0200)]
fix #7779 adapting the creation delivery of the static swagger doc to version 2.6.1
Katja Luther [Fri, 19 Oct 2018 06:56:57 +0000 (08:56 +0200)]
ref #7345: rename cdmPreference for common name marker
Katja Luther [Thu, 18 Oct 2018 20:26:39 +0000 (22:26 +0200)]
ref #7793: add preferencePredicate for disable multiple classifications
Andreas Kohlbecker [Thu, 18 Oct 2018 18:05:03 +0000 (20:05 +0200)]
ref #7770 fixing layout issue and menu items active state and updating diffs
Andreas Kohlbecker [Thu, 18 Oct 2018 17:41:55 +0000 (19:41 +0200)]
#7770 documenting springfox-swagger-ui update process
Andreas Kohlbecker [Thu, 18 Oct 2018 17:09:21 +0000 (19:09 +0200)]
ref #7779 applying Cdm specific changes to springfox-ui:
- preserving the modified index.hml as index-last.html
- creatng diffs with the changes applied last time
- applying cdm changes to springfox.js and index.html
Andreas Kohlbecker [Thu, 18 Oct 2018 16:35:11 +0000 (18:35 +0200)]
ref #7779 upgrading springfox-swagger-ui to 2.6.1 and preserving the modified springfox.js as springfox-last.js
Andreas Kohlbecker [Thu, 18 Oct 2018 13:53:47 +0000 (15:53 +0200)]
ref #7779 upgrading springfox-swagger-ui to 2.6.1 and preserving the modified springfox.js as springfox-last.js
Andreas Kohlbecker [Thu, 18 Oct 2018 13:06:22 +0000 (15:06 +0200)]
fix #7834 findInTaxonGraph implemented for Registrations with RegistrationDTOController endpoint
Katja Luther [Thu, 18 Oct 2018 12:29:23 +0000 (14:29 +0200)]
fix problems for taxEditor preferences
Katja Luther [Thu, 18 Oct 2018 07:48:41 +0000 (09:48 +0200)]
ref #7345: add preferencePredicate for commonname references
Katja Luther [Thu, 18 Oct 2018 07:05:19 +0000 (09:05 +0200)]
restructure preference predicates and add newTaxeditorInstance to cdmPreference
Andreas Kohlbecker [Wed, 17 Oct 2018 14:15:57 +0000 (16:15 +0200)]
ref #7831 adding name exlude filter to TaxonNamePartsFilter
Andreas Müller [Wed, 17 Oct 2018 11:51:52 +0000 (13:51 +0200)]
Add tax editor preferences utilities
Andreas Kohlbecker [Wed, 17 Oct 2018 10:39:19 +0000 (12:39 +0200)]
ref #7648 fixing bugs related to single taxa per graph and updating rels from lower ranks, with testcase