Andreas Kohlbecker [Mon, 17 May 2021 21:21:33 +0000 (23:21 +0200)]
ref #9607 renaming class to MediaInfoFileReader
Andreas Kohlbecker [Mon, 17 May 2021 21:09:21 +0000 (23:09 +0200)]
ref #9607 adding media-info-model as dependency
Andreas Kohlbecker [Mon, 17 May 2021 21:07:42 +0000 (23:07 +0200)]
improved error reporting
Andreas Müller [Mon, 17 May 2021 17:15:45 +0000 (19:15 +0200)]
ref #1924 use colon as after author and year operator
Andreas Müller [Mon, 17 May 2021 15:50:09 +0000 (17:50 +0200)]
cleanup
Andreas Müller [Mon, 17 May 2021 15:49:49 +0000 (17:49 +0200)]
ref #9624 use short citation without brackets in cdmlight reference export (cont.)
Andreas Müller [Mon, 17 May 2021 15:14:31 +0000 (17:14 +0200)]
ref #9624, ref #7305, ref #9326 change max number of nomencl. authors to unlimited
Katja Luther [Mon, 17 May 2021 15:27:56 +0000 (17:27 +0200)]
adapt cache updater for new progress monitor handling - adapt updateCaches in IdentifiableServiceBase
Katja Luther [Mon, 17 May 2021 15:21:00 +0000 (17:21 +0200)]
adapt cache updater for new progress monitor handling - continue
Katja Luther [Mon, 17 May 2021 15:17:55 +0000 (17:17 +0200)]
adapt cache updater for new progress monitor handling - continue
Katja Luther [Mon, 17 May 2021 15:14:13 +0000 (17:14 +0200)]
adapt cache updater for new progress monitor handling - continue
Katja Luther [Mon, 17 May 2021 15:02:55 +0000 (17:02 +0200)]
adapt cache updater for new progress monitor handling
Andreas Müller [Mon, 17 May 2021 14:46:08 +0000 (16:46 +0200)]
minor
Andreas Müller [Mon, 17 May 2021 14:45:12 +0000 (16:45 +0200)]
minor
Andreas Müller [Mon, 17 May 2021 14:44:39 +0000 (16:44 +0200)]
ref #9624 use short citation without brackets in cdmlight reference export
Andreas Müller [Mon, 17 May 2021 12:29:29 +0000 (14:29 +0200)]
ref #9624 use default short citation for TaxonRelationshipFormatter (e.g. MAN or ppSyns citations)
Katja Luther [Mon, 17 May 2021 11:35:29 +0000 (13:35 +0200)]
ref #9590: remove unused variable
Katja Luther [Mon, 17 May 2021 07:45:52 +0000 (09:45 +0200)]
add appended phrase to scientific name, taxon and synonym tables
Katja Luther [Mon, 17 May 2021 07:05:16 +0000 (09:05 +0200)]
fix getUuidAndTitleCache for persons/teams only
Andreas Müller [Fri, 14 May 2021 23:34:17 +0000 (01:34 +0200)]
ref #1815 final tests on reset titleCache
Andreas Müller [Fri, 14 May 2021 22:31:03 +0000 (00:31 +0200)]
ref #9624 fix EMPTY_TEAM issue for non-titleCache formatting of teams
Andreas Müller [Fri, 14 May 2021 22:02:47 +0000 (00:02 +0200)]
ref #9530, ref #6499 add pages for book sections (cont. II)
Andreas Müller [Fri, 14 May 2021 21:58:52 +0000 (23:58 +0200)]
reenable some test
Andreas Müller [Fri, 14 May 2021 21:58:30 +0000 (23:58 +0200)]
ref #9530, ref #6499 add pages for book sections (cont.)
Andreas Müller [Fri, 14 May 2021 21:41:38 +0000 (23:41 +0200)]
fix #9530, ref #6499 add pages for book sections
Andreas Müller [Fri, 14 May 2021 21:39:57 +0000 (23:39 +0200)]
ref #9529 replace afterSectionAuthor n-dash by comma
Andreas Müller [Fri, 14 May 2021 21:36:38 +0000 (23:36 +0200)]
ref #9604 adapt javadoc for ReferenceDefaultCacheStrategy
Andreas Müller [Fri, 14 May 2021 20:38:22 +0000 (22:38 +0200)]
ref #9529 fix duplicated dashes and replaces minus by dashes in book sections without title
Andreas Müller [Fri, 14 May 2021 19:41:33 +0000 (21:41 +0200)]
revert deduplication for term DTOs (cont.)
Andreas Müller [Fri, 14 May 2021 17:54:27 +0000 (19:54 +0200)]
ref #9624, ref #7305, ref #9326 refactor team formatting all over cdmlib (including et al. handling for biblio references)
Andreas Müller [Fri, 14 May 2021 11:56:52 +0000 (13:56 +0200)]
ref #7305, ref #9326 allow different etAlPosition for titleCache and nomCache and factory methods and cleanup tests
Andreas Müller [Fri, 14 May 2021 11:17:54 +0000 (13:17 +0200)]
cleanup
Andreas Müller [Fri, 14 May 2021 11:17:43 +0000 (13:17 +0200)]
factory method and singleton support for TaxonRelationshipFormatter
Andreas Müller [Fri, 14 May 2021 11:14:39 +0000 (13:14 +0200)]
fix #9623 remove TaxonBaseShortSecCacheStrategy and CacheUpdaterWithNewCacheStrategy
Andreas Müller [Fri, 14 May 2021 10:48:39 +0000 (12:48 +0200)]
fix #9433 titleCache generation for misapplications only adapted (use sensu, not sec.)
Andreas Müller [Fri, 14 May 2021 10:24:57 +0000 (12:24 +0200)]
revert deduplication for term DTOs
Andreas Müller [Fri, 14 May 2021 09:11:07 +0000 (11:11 +0200)]
cleanup
Andreas Müller [Fri, 14 May 2021 09:09:17 +0000 (11:09 +0200)]
remove doubful ? from protected taxon titleCaches
Andreas Müller [Fri, 14 May 2021 09:08:39 +0000 (11:08 +0200)]
cleanup
Andreas Müller [Fri, 14 May 2021 08:44:37 +0000 (10:44 +0200)]
deduplicate all results in vocabulary dao
Andreas Müller [Fri, 14 May 2021 08:44:16 +0000 (10:44 +0200)]
cleanup
Andreas Müller [Fri, 14 May 2021 08:29:08 +0000 (10:29 +0200)]
deduplicate all results in term dao
Andreas Müller [Fri, 14 May 2021 08:28:46 +0000 (10:28 +0200)]
cleanup
Andreas Müller [Thu, 13 May 2021 22:16:47 +0000 (00:16 +0200)]
ref #3666 original spelling deduplication
Andreas Müller [Thu, 13 May 2021 17:48:55 +0000 (19:48 +0200)]
ref #3666 original spelling parser for names without reference
Andreas Müller [Thu, 13 May 2021 17:20:52 +0000 (19:20 +0200)]
cleanup
Andreas Müller [Thu, 13 May 2021 16:48:46 +0000 (18:48 +0200)]
cleanup
Andreas Müller [Thu, 13 May 2021 16:48:26 +0000 (18:48 +0200)]
ref #3666 first implementation of original spelling parser (cont.)
Andreas Müller [Thu, 13 May 2021 16:47:11 +0000 (18:47 +0200)]
ref #3666 first implementation of original spelling parser
Andreas Müller [Thu, 13 May 2021 11:48:51 +0000 (13:48 +0200)]
ref #3665 test for original spelling for differing species epi and subspecies epi
Andreas Müller [Thu, 13 May 2021 11:47:48 +0000 (13:47 +0200)]
tests not failing without aspectj
Andreas Müller [Thu, 13 May 2021 11:45:29 +0000 (13:45 +0200)]
fix #3667 implement tagged text for original spellings
Andreas Müller [Thu, 13 May 2021 10:16:46 +0000 (12:16 +0200)]
ref #3667 some more tests for original spelling formatting
Andreas Müller [Thu, 13 May 2021 09:41:29 +0000 (11:41 +0200)]
ref #9604 split to OriginalSourceFormatter (cont.)
Andreas Müller [Thu, 13 May 2021 09:16:27 +0000 (11:16 +0200)]
ref #9604 split to OriginalSourceFormatter
Andreas Müller [Thu, 13 May 2021 09:14:11 +0000 (11:14 +0200)]
cleanup
Andreas Müller [Thu, 13 May 2021 07:29:23 +0000 (09:29 +0200)]
ref #9622 allow releasing progress monitors
Andreas Müller [Thu, 13 May 2021 07:25:57 +0000 (09:25 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 23:26:22 +0000 (01:26 +0200)]
ref #6359 improve progress monitoring for setSecundumForSubtree
Andreas Müller [Wed, 12 May 2021 23:09:11 +0000 (01:09 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 23:08:52 +0000 (01:08 +0200)]
ref #6359 fix NPE when removing sec
Andreas Müller [Wed, 12 May 2021 17:22:20 +0000 (19:22 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 17:22:07 +0000 (19:22 +0200)]
ref #8297 improve out of scope handling for alphabetically ordered condensed distributions
Andreas Müller [Wed, 12 May 2021 15:13:52 +0000 (17:13 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 15:00:11 +0000 (17:00 +0200)]
ref #9590 remove redundant nameUsedInSource handling code
Andreas Müller [Wed, 12 May 2021 14:46:04 +0000 (16:46 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 14:29:48 +0000 (16:29 +0200)]
cleanup
Katja Luther [Wed, 12 May 2021 14:08:42 +0000 (16:08 +0200)]
add comment to random uuid for condensed distribution
Katja Luther [Wed, 12 May 2021 12:48:33 +0000 (14:48 +0200)]
ref #9590: code cleanup -continue
Katja Luther [Wed, 12 May 2021 12:44:56 +0000 (14:44 +0200)]
ref #9590: code cleanup
Andreas Müller [Wed, 12 May 2021 12:47:45 +0000 (14:47 +0200)]
ref #5573 minor changes to MediaSpecimenDefaultCacheStrategyTest
Andreas Müller [Wed, 12 May 2021 09:30:23 +0000 (11:30 +0200)]
cleanup
Andreas Müller [Wed, 12 May 2021 08:48:55 +0000 (10:48 +0200)]
ref #9601, ref #9611 by default don't include MAN and ppSyns for setSecundumForSubtree (cont.)
Andreas Kohlbecker [Wed, 12 May 2021 08:17:56 +0000 (10:17 +0200)]
ref #9612 removing unrelated test method and clarifying the remainig test method
Andreas Müller [Wed, 12 May 2021 08:05:16 +0000 (10:05 +0200)]
ref #9601, ref #9611 by default don't include MAN and ppSyns for setSecundumForSubtree
Andreas Müller [Wed, 12 May 2021 07:57:05 +0000 (09:57 +0200)]
ref #9601, ref #9611 have only a single overwriteExisting parameter for setSecundumForSubtree
Andreas Müller [Wed, 12 May 2021 07:46:29 +0000 (09:46 +0200)]
cleanup
Andreas Müller [Tue, 11 May 2021 21:31:37 +0000 (23:31 +0200)]
ref #9590 use boolean parameter newUuidForAcceptedTaxon instead of 2 different public methods (cont.)
Andreas Müller [Tue, 11 May 2021 21:22:34 +0000 (23:22 +0200)]
cleanup
Andreas Müller [Tue, 11 May 2021 20:17:49 +0000 (22:17 +0200)]
ref #9590 use boolean parameter newUuidForAcceptedTaxon instead of 2 different public methods
Andreas Müller [Tue, 11 May 2021 20:16:12 +0000 (22:16 +0200)]
cleanup
Andreas Müller [Tue, 11 May 2021 16:01:28 +0000 (18:01 +0200)]
ref #9618 add NomenclaturalCodeEdition.abbrev (some abbrevs are still guesses)
Andreas Müller [Tue, 11 May 2021 13:52:04 +0000 (15:52 +0200)]
ref #9617 javadoc adaptations
Andreas Müller [Tue, 11 May 2021 11:04:44 +0000 (13:04 +0200)]
ref #9613 adapt uuids in tests
Andreas Müller [Tue, 11 May 2021 10:42:50 +0000 (12:42 +0200)]
update cached model to 5.23
Andreas Müller [Tue, 11 May 2021 10:36:42 +0000 (12:36 +0200)]
update cdmlib test H2 to 5.23
Andreas Müller [Tue, 11 May 2021 10:35:46 +0000 (12:35 +0200)]
ref #9617 javadoc in rank class
Andreas Müller [Tue, 11 May 2021 10:31:42 +0000 (12:31 +0200)]
fix #9617 rename ICNB to ICNP in cdmlib
Andreas Müller [Tue, 11 May 2021 10:16:47 +0000 (12:16 +0200)]
upgrade to v5.23
Andreas Müller [Tue, 11 May 2021 10:16:11 +0000 (12:16 +0200)]
ref #9613 change uuid for role project manager as it was used also for user manager before
Andreas Müller [Tue, 11 May 2021 10:12:23 +0000 (12:12 +0200)]
ref #9539 add clone for availableFor
Andreas Müller [Tue, 11 May 2021 10:04:20 +0000 (12:04 +0200)]
cleanup
Andreas Müller [Tue, 11 May 2021 08:56:02 +0000 (10:56 +0200)]
ref #9619 add conceptId, conceptDefinitions, conceptStatus, taxonTypes and currentConceptPeriod to Taxon
Andreas Müller [Mon, 10 May 2021 08:24:37 +0000 (10:24 +0200)]
add byKey method to CondensedDistributionRecipe
Andreas Müller [Mon, 10 May 2021 08:24:06 +0000 (10:24 +0200)]
cleanup
Katja Luther [Mon, 10 May 2021 08:10:33 +0000 (10:10 +0200)]
fix exception in cdmlight
Katja Luther [Mon, 10 May 2021 06:51:40 +0000 (08:51 +0200)]
cdmlight: move condensed distribution string to simple facts table
Andreas Kohlbecker [Fri, 7 May 2021 14:49:38 +0000 (16:49 +0200)]
ref #9607 trunk for MediaInfoServiceReader
Andreas Kohlbecker [Fri, 7 May 2021 14:48:46 +0000 (16:48 +0200)]
ref #9607 avoiding NPEs in case of file: URIs
Andreas Kohlbecker [Fri, 7 May 2021 14:46:08 +0000 (16:46 +0200)]
ref #9607 ref #9203 less error-prone api for MediaUriTransformationProcessor - adapting test