Andreas Müller [Thu, 10 Oct 2019 09:55:44 +0000 (11:55 +0200)]
cleanup
Andreas Müller [Wed, 9 Oct 2019 19:01:11 +0000 (21:01 +0200)]
cleanup
Andreas Müller [Wed, 9 Oct 2019 19:00:57 +0000 (21:00 +0200)]
ref #2717 add EM common name area UUIDs to BerlinModelTransformer
Andreas Müller [Wed, 9 Oct 2019 11:08:17 +0000 (13:08 +0200)]
cleanup
Andreas Müller [Wed, 9 Oct 2019 09:04:06 +0000 (11:04 +0200)]
#8577 fix handling of long values in getUniqueInteger
Andreas Müller [Wed, 9 Oct 2019 09:00:47 +0000 (11:00 +0200)]
cleanup
Katja Luther [Wed, 9 Oct 2019 08:40:50 +0000 (10:40 +0200)]
ref #1445: fix helper methods for pesi merging
Andreas Müller [Tue, 8 Oct 2019 20:53:47 +0000 (22:53 +0200)]
fix default schema validation for ImportConfiguratorBase
Andreas Müller [Tue, 8 Oct 2019 20:53:03 +0000 (22:53 +0200)]
cleanup
Andreas Müller [Mon, 7 Oct 2019 18:45:08 +0000 (20:45 +0200)]
ref #1444 add diffIndex method to CdmUtils
Katja Luther [Tue, 8 Oct 2019 10:23:42 +0000 (12:23 +0200)]
smaller changes in CdmLightExport (syn sec and fullAuthor in references)
Andreas Müller [Sun, 6 Oct 2019 22:51:47 +0000 (00:51 +0200)]
ref #1444, ref #8509 adapt IncludedInMapper and TaxonRelationshipType uuid access to ERMS needs
Andreas Müller [Sun, 6 Oct 2019 07:36:35 +0000 (09:36 +0200)]
ref #1444 make getTaxonRelationshipType public in importers to make it usable in mappers
Andreas Müller [Sun, 6 Oct 2019 07:34:55 +0000 (09:34 +0200)]
ref #1444 handle no language as unknown language for imported new nomenclatural status
Andreas Müller [Sun, 6 Oct 2019 07:32:34 +0000 (09:32 +0200)]
ref #1444, ref #8509 move ERMS synonym taxon relationship uuids to TaxonRelationship class
Andreas Müller [Sun, 6 Oct 2019 07:28:09 +0000 (09:28 +0200)]
ref #1444 adapt DbImportSynonymMapper to ERMS requirements
Andreas Müller [Sun, 6 Oct 2019 07:26:02 +0000 (09:26 +0200)]
ref #1444 add getSynonymRelationTypesByKey to IInputTransformer
Andreas Müller [Sun, 6 Oct 2019 07:24:17 +0000 (09:24 +0200)]
ref #8509 fix NPE in getAnnotations(by type-uuid)
Andreas Müller [Sun, 6 Oct 2019 07:23:13 +0000 (09:23 +0200)]
reduce log level for non latin nom status representations
Andreas Müller [Sun, 6 Oct 2019 07:20:20 +0000 (09:20 +0200)]
cleanup
Katja Luther [Tue, 1 Oct 2019 13:03:55 +0000 (15:03 +0200)]
ref #5873: check for general description editing right
Katja Luther [Tue, 1 Oct 2019 11:38:42 +0000 (13:38 +0200)]
revert some changes
Katja Luther [Tue, 1 Oct 2019 11:26:56 +0000 (13:26 +0200)]
ref #5873: filter nodes without permission
Andreas Müller [Mon, 30 Sep 2019 08:16:27 +0000 (10:16 +0200)]
ref #1444 allow to create new NomenclaturalStatusTypes during import
Andreas Müller [Mon, 30 Sep 2019 08:15:43 +0000 (10:15 +0200)]
cleanup
Andreas Müller [Sun, 29 Sep 2019 20:23:04 +0000 (22:23 +0200)]
cleanup
Andreas Müller [Sun, 29 Sep 2019 20:22:49 +0000 (22:22 +0200)]
ref #1444 add resetTitleCache method
Andreas Müller [Sun, 29 Sep 2019 19:54:56 +0000 (21:54 +0200)]
ref #1444 adapt DbImportMethodMapper for ERMS titleCache testing
Andreas Müller [Sun, 29 Sep 2019 19:52:16 +0000 (21:52 +0200)]
cleanup
Andreas Müller [Sun, 29 Sep 2019 18:18:28 +0000 (20:18 +0200)]
ref #8509 handle non-default language textdata correctly in DbTextDataMapper
Andreas Müller [Sun, 29 Sep 2019 18:17:17 +0000 (20:17 +0200)]
ref #8509 handle truncated titlecaches in DbObjectMapper correctly
Andreas Müller [Sun, 29 Sep 2019 18:16:10 +0000 (20:16 +0200)]
cleanup
Andreas Müller [Sat, 28 Sep 2019 22:30:15 +0000 (00:30 +0200)]
ref #8509 dependend IdIncMapper
Andreas Müller [Sat, 28 Sep 2019 22:29:33 +0000 (00:29 +0200)]
ref #1444 add trim to DbImportMultiLanguageTextMapper
Andreas Müller [Sat, 28 Sep 2019 22:29:07 +0000 (00:29 +0200)]
cleanup
Andreas Müller [Sat, 28 Sep 2019 16:41:33 +0000 (18:41 +0200)]
ref #8509 some helper methods for ERMS export
Andreas Müller [Sat, 28 Sep 2019 16:40:36 +0000 (18:40 +0200)]
ref #8509 new factory method for MethodMapper
Andreas Müller [Sat, 28 Sep 2019 16:40:02 +0000 (18:40 +0200)]
ref #1444, ref #8509 add some import and export mappers
Andreas Müller [Sat, 28 Sep 2019 16:38:59 +0000 (18:38 +0200)]
ref #1444, ref #8509 fix some import and export mappers
Andreas Müller [Sat, 28 Sep 2019 16:38:06 +0000 (18:38 +0200)]
cleanup
Andreas Müller [Fri, 27 Sep 2019 15:38:45 +0000 (17:38 +0200)]
ref #1444 refactor DbAnnotationMapper and add included type filtering
Andreas Müller [Fri, 27 Sep 2019 15:37:59 +0000 (17:37 +0200)]
ref #1444 use sourceReferenceTitle instead of database name where available
Andreas Müller [Fri, 27 Sep 2019 15:37:05 +0000 (17:37 +0200)]
cleanup
Patrick Plitzner [Thu, 26 Sep 2019 08:44:53 +0000 (10:44 +0200)]
ref #8450 minor refactoring
Patrick Plitzner [Thu, 26 Sep 2019 08:44:42 +0000 (10:44 +0200)]
ref #8450 Add sample size to quantitative data aggregate
Andreas Kohlbecker [Thu, 26 Sep 2019 14:15:17 +0000 (16:15 +0200)]
fix #8570 adding PolytomousKeyNode.otherNode to web service response
Katja Luther [Thu, 26 Sep 2019 13:07:30 +0000 (15:07 +0200)]
ref #8568: fix findByUuidsAsDto for terms
Andreas Müller [Thu, 26 Sep 2019 11:06:48 +0000 (13:06 +0200)]
Cleanup PolytomousKeyNode and remove deprecated methods
Katja Luther [Thu, 26 Sep 2019 11:01:03 +0000 (13:01 +0200)]
ref #8568: methods to get term and voc dtos by uuid list
Andreas Müller [Thu, 26 Sep 2019 09:41:05 +0000 (11:41 +0200)]
ref #1444 fix ResultSetPartitioner for imports with >1 ID columns
Andreas Müller [Thu, 26 Sep 2019 08:57:50 +0000 (10:57 +0200)]
ref #8509 replace deprecated INameService.allRelationships for PESI RelTaxon export
Andreas Müller [Thu, 26 Sep 2019 08:25:06 +0000 (10:25 +0200)]
ref #8509 Adapt DbAnnotationMapper to work for PESI RelTaxon export
Andreas Müller [Thu, 26 Sep 2019 08:23:21 +0000 (10:23 +0200)]
cleanup
Patrick Plitzner [Thu, 26 Sep 2019 07:47:55 +0000 (09:47 +0200)]
ref #8450 Only clone specimen descriptions once
Katja Luther [Wed, 25 Sep 2019 11:58:18 +0000 (13:58 +0200)]
ref #8226: add new preferencePredicate for modifiers
Patrick Plitzner [Wed, 25 Sep 2019 10:12:54 +0000 (12:12 +0200)]
ref #8450 Speed up loading of categorical state data
Andreas Müller [Tue, 24 Sep 2019 17:14:32 +0000 (19:14 +0200)]
ignore EuroPlusMedCondensedDistributionComposerTest again. Throws exception in maven
pplitzner [Tue, 24 Sep 2019 17:08:28 +0000 (19:08 +0200)]
refactoring
Patrick Plitzner [Tue, 24 Sep 2019 14:28:57 +0000 (16:28 +0200)]
ref #8450 Only aggregate statistical quantitative data
Patrick Plitzner [Tue, 24 Sep 2019 13:31:03 +0000 (15:31 +0200)]
ref #8450 Do not show duplicate categorical states in aggregation
Andreas Müller [Tue, 24 Sep 2019 12:36:25 +0000 (14:36 +0200)]
cleanup KeyStatement and PolytomousKeyNode
Andreas Müller [Tue, 24 Sep 2019 05:37:18 +0000 (07:37 +0200)]
cleanup
Andreas Müller [Tue, 24 Sep 2019 05:36:14 +0000 (07:36 +0200)]
unignore EuroPlusMedCondensedDistributionComposerTest
Patrick Plitzner [Mon, 23 Sep 2019 12:47:36 +0000 (14:47 +0200)]
ref #8467 Fix re-save problem when deleting clone sources
Patrick Plitzner [Mon, 23 Sep 2019 10:12:37 +0000 (12:12 +0200)]
Revert "Revert "ref #8467 Save cloned source description for aggregation""
This reverts commit
d646ba64ca8adcdfcc04b21e80c9d98da6b6f6f3.
jenkins [Mon, 23 Sep 2019 11:25:30 +0000 (13:25 +0200)]
Updating develop poms back to pre merge state
jenkins [Mon, 23 Sep 2019 11:25:29 +0000 (13:25 +0200)]
Merge branch 'master' into develop
jenkins [Mon, 23 Sep 2019 11:25:28 +0000 (13:25 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Mon, 23 Sep 2019 11:25:24 +0000 (13:25 +0200)]
Merge branch 'release/5.10.0'
jenkins [Mon, 23 Sep 2019 11:03:54 +0000 (13:03 +0200)]
updating poms for branch'release/5.10.0' with non-snapshot versions
jenkins [Mon, 23 Sep 2019 10:23:58 +0000 (12:23 +0200)]
updating poms for 5.11.0-SNAPSHOT development
Andreas Müller [Mon, 23 Sep 2019 10:13:35 +0000 (12:13 +0200)]
ref #1444 add new ISourceable.add method
Andreas Müller [Mon, 23 Sep 2019 10:12:04 +0000 (12:12 +0200)]
cleanup condensedDistribution classes
Patrick Plitzner [Mon, 23 Sep 2019 09:07:35 +0000 (11:07 +0200)]
Revert "ref #8467 Save cloned source description for aggregation"
This reverts commit
16bda3fbbc8445d98653d209e8fe27f611a99890.
pplitzner [Mon, 23 Sep 2019 08:21:19 +0000 (10:21 +0200)]
ref #8467 Save cloned source description for aggregation
Patrick Plitzner [Fri, 20 Sep 2019 05:45:09 +0000 (07:45 +0200)]
Add flag to filter subtypes in service method
Andreas Müller [Thu, 19 Sep 2019 14:31:12 +0000 (16:31 +0200)]
cleanup
Patrick Plitzner [Thu, 19 Sep 2019 11:29:38 +0000 (13:29 +0200)]
ref #8450 Move key generation to long running task
Katja Luther [Thu, 19 Sep 2019 11:16:43 +0000 (13:16 +0200)]
fix NPE in abcd import
Katja Luther [Thu, 19 Sep 2019 10:39:00 +0000 (12:39 +0200)]
minor
Andreas Müller [Thu, 19 Sep 2019 10:26:54 +0000 (12:26 +0200)]
ref #8469 fix NoSuchElementException (but issue itself might still be open)
Katja Luther [Thu, 19 Sep 2019 10:23:31 +0000 (12:23 +0200)]
add derivedFrom to propertyPath in findFieldUnitDTO
Katja Luther [Wed, 18 Sep 2019 14:48:40 +0000 (16:48 +0200)]
ref #8533: minor
Andreas Kohlbecker [Thu, 19 Sep 2019 09:26:02 +0000 (11:26 +0200)]
removing AdvancedBeanInitializer log level TRACE
Patrick Plitzner [Thu, 19 Sep 2019 08:09:06 +0000 (10:09 +0200)]
ref #8450 Optimize aggregation
- Only aggregate descriptions with character data
- delete all aggregation before new aggregation
Patrick Plitzner [Thu, 19 Sep 2019 07:02:08 +0000 (09:02 +0200)]
ref #8450 Create and cache label for quantitative data in row wrapper
Andreas Müller [Wed, 18 Sep 2019 10:46:45 +0000 (12:46 +0200)]
add ExactValue to possible input for PolytomousKeyGenerator
Andreas Müller [Wed, 18 Sep 2019 09:43:15 +0000 (11:43 +0200)]
some cleanup in PolytomousKeyGenerator
Andreas Müller [Wed, 18 Sep 2019 08:37:27 +0000 (10:37 +0200)]
ref #1444 fix missing status in DistributionCreation for ERMS
Andreas Müller [Wed, 18 Sep 2019 08:36:22 +0000 (10:36 +0200)]
cleanup
Andreas Müller [Tue, 17 Sep 2019 15:02:58 +0000 (17:02 +0200)]
ref #1444 fix feature creation mapper on setting the feature to the object
Andreas Müller [Tue, 17 Sep 2019 15:02:12 +0000 (17:02 +0200)]
cleanup
pplitzner [Tue, 17 Sep 2019 14:38:52 +0000 (16:38 +0200)]
ref #8450 Cache display data in row wrapper
Katja Luther [Tue, 17 Sep 2019 12:11:10 +0000 (14:11 +0200)]
ref #8034: filter last selected references by inReference type
Katja Luther [Tue, 17 Sep 2019 11:38:34 +0000 (13:38 +0200)]
ref #8034: filter last selected references by inReference type
Andreas Müller [Tue, 17 Sep 2019 11:53:41 +0000 (13:53 +0200)]
ref #8509 reduce logging for multiple sources problem
Andreas Müller [Tue, 17 Sep 2019 11:52:50 +0000 (13:52 +0200)]
ref #1444 fix image import mapping
Andreas Müller [Tue, 17 Sep 2019 11:51:58 +0000 (13:51 +0200)]
fix (revert) incorrect signature in DbLanguageMapper
Andreas Müller [Tue, 17 Sep 2019 11:51:16 +0000 (13:51 +0200)]
update Feature mapper to set the feature immediately to the description item
Andreas Müller [Tue, 17 Sep 2019 11:49:59 +0000 (13:49 +0200)]
cleanup