Andreas Müller [Tue, 1 Dec 2020 18:19:41 +0000 (19:19 +0100)]
ref #4866, ref #9228 implement subtree clone (cont., fix taxon cloning)
Andreas Müller [Tue, 1 Dec 2020 17:57:13 +0000 (18:57 +0100)]
cleanup
Andreas Müller [Tue, 1 Dec 2020 17:33:45 +0000 (18:33 +0100)]
ref #4866, ref #9228 implement subtree clone
Andreas Kohlbecker [Tue, 1 Dec 2020 14:41:01 +0000 (15:41 +0100)]
fix #8458 documenting FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Andreas Kohlbecker [Tue, 1 Dec 2020 13:13:02 +0000 (14:13 +0100)]
ref #8851 extednding init strategy for name descriptions by sources and annotations
Andreas Müller [Tue, 1 Dec 2020 12:45:43 +0000 (13:45 +0100)]
ref #9204 upgrade postgresql driver to latest version
Andreas Müller [Tue, 1 Dec 2020 12:37:38 +0000 (13:37 +0100)]
move mchange-commons-java version to parent pom
Andreas Müller [Tue, 1 Dec 2020 12:28:27 +0000 (13:28 +0100)]
ref #4866, ref #9228 implement subtree clone in branch
Katja Luther [Mon, 30 Nov 2020 14:40:59 +0000 (15:40 +0100)]
ref #8774: save term tree titleCache
Katja Luther [Mon, 30 Nov 2020 12:39:15 +0000 (13:39 +0100)]
ref #9103: add handling of classifications in TaxonnodeDto - continue
Katja Luther [Mon, 30 Nov 2020 12:08:56 +0000 (13:08 +0100)]
ref #9103: add handling of classifications in TaxonnodeDto
Andreas Kohlbecker [Mon, 30 Nov 2020 11:09:05 +0000 (12:09 +0100)]
ref #9103 adding missing null check
Andreas Müller [Mon, 30 Nov 2020 11:00:12 +0000 (12:00 +0100)]
cleanup
Andreas Müller [Mon, 30 Nov 2020 10:33:52 +0000 (11:33 +0100)]
Adapt javadoc for TypeDesignationBase
Katja Luther [Mon, 30 Nov 2020 09:59:14 +0000 (10:59 +0100)]
ref #8774: avoid NPE in termNodeDto
Andreas Müller [Fri, 27 Nov 2020 17:24:40 +0000 (18:24 +0100)]
ref #9280 rename IKeyTerm.getMessage() => .getLabel()
Andreas Müller [Fri, 27 Nov 2020 16:46:57 +0000 (17:46 +0100)]
cleanup
Andreas Kohlbecker [Fri, 27 Nov 2020 15:07:08 +0000 (16:07 +0100)]
ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor - bug fix
Andreas Kohlbecker [Fri, 27 Nov 2020 14:45:12 +0000 (15:45 +0100)]
ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor - 2
Andreas Kohlbecker [Fri, 27 Nov 2020 14:43:40 +0000 (15:43 +0100)]
ref #9335 creating fallback representation for Terms in TermBaseBeanProcessor
Andreas Kohlbecker [Fri, 27 Nov 2020 11:52:24 +0000 (12:52 +0100)]
ref #9265 removing NomenclaturalSourceBeanProcessor since it causes many hard to controll LazyInitializationExcptions in web services
Andreas Kohlbecker [Fri, 27 Nov 2020 11:49:17 +0000 (12:49 +0100)]
typo
Andreas Kohlbecker [Fri, 27 Nov 2020 09:52:45 +0000 (10:52 +0100)]
code cleaning and improving documentation
Andreas Kohlbecker [Fri, 27 Nov 2020 09:51:00 +0000 (10:51 +0100)]
RegistrationDTO: typifiedName as non-property
Andreas Müller [Wed, 25 Nov 2020 20:14:37 +0000 (21:14 +0100)]
ref #6623 include microReference in DefaultReferenceCacheStrategy.getCitation(...) (cont.)
Andreas Müller [Wed, 25 Nov 2020 19:58:08 +0000 (20:58 +0100)]
ref #6623 include microReference in DefaultReferenceCacheStrategy.getCitation(...)
Andreas Müller [Wed, 25 Nov 2020 19:55:10 +0000 (20:55 +0100)]
cleanup
Andreas Müller [Wed, 25 Nov 2020 19:01:38 +0000 (20:01 +0100)]
change name for TaggedEntityReference
Andreas Kohlbecker [Wed, 25 Nov 2020 17:08:02 +0000 (18:08 +0100)]
ref #9279 TypeDesignationDTO basing on new class RepresentableEntityReference
Andreas Kohlbecker [Wed, 25 Nov 2020 16:43:59 +0000 (17:43 +0100)]
ref #9265 making use of nomenclaturalSource->nomenclaturalCitation - extending initStrategy
Andreas Müller [Wed, 25 Nov 2020 16:25:09 +0000 (17:25 +0100)]
cleanup
Andreas Müller [Wed, 25 Nov 2020 16:24:39 +0000 (17:24 +0100)]
ref #9322 remove invalid designation relationship from cdmlib
Andreas Kohlbecker [Wed, 25 Nov 2020 16:06:13 +0000 (17:06 +0100)]
ref #9265 introducing NomenclaturalSourceBeanProcessor to add nomenclaturalCitation to web service responses
Andreas Kohlbecker [Wed, 25 Nov 2020 13:57:39 +0000 (14:57 +0100)]
ref #9265 implementing protologueLinks web service
Andreas Müller [Wed, 25 Nov 2020 13:14:18 +0000 (14:14 +0100)]
ref #9282 fix NPE in nomenclaturalStanding computation
Katja Luther [Wed, 25 Nov 2020 08:36:37 +0000 (09:36 +0100)]
avoid NPE and CCE
Andreas Müller [Tue, 24 Nov 2020 22:04:11 +0000 (23:04 +0100)]
ref #9279 fix TypedEntity for source
Andreas Müller [Tue, 24 Nov 2020 20:58:54 +0000 (21:58 +0100)]
ref #9279 add TypedEntities to TypeDesignationDTO
Andreas Müller [Tue, 24 Nov 2020 20:57:54 +0000 (21:57 +0100)]
cleanup
Andreas Müller [Tue, 24 Nov 2020 19:51:23 +0000 (20:51 +0100)]
ref #9279 use RegistrationDTO instead of TypedEntityReference for TypeDesignations
Andreas Müller [Tue, 24 Nov 2020 19:36:47 +0000 (20:36 +0100)]
cleanup
Andreas Müller [Tue, 24 Nov 2020 18:30:03 +0000 (19:30 +0100)]
ref #9279 fix make WorkingSet a Map again and cleanup
Andreas Müller [Tue, 24 Nov 2020 17:56:37 +0000 (18:56 +0100)]
ref #9279 make WorkingSet a Map again and fix typo in RegistrationDTO attribute and fix jsonConfigurations
Andreas Müller [Tue, 24 Nov 2020 17:16:46 +0000 (18:16 +0100)]
ref #9279 improve generics for TypedEntityReference
Andreas Müller [Tue, 24 Nov 2020 16:31:47 +0000 (17:31 +0100)]
ref #9279 separate formatting from TypeDesignationSetManager and extract TypeDesignationWorkingSet as top level class and some cleanup
Andreas Müller [Tue, 24 Nov 2020 14:00:57 +0000 (15:00 +0100)]
cleanup
Andreas Müller [Tue, 24 Nov 2020 13:35:39 +0000 (14:35 +0100)]
ref #9279 remove redundant typifiedNameRef (TypedEntityReference) and cleanup
Andreas Müller [Tue, 24 Nov 2020 11:57:54 +0000 (12:57 +0100)]
cleanup
Andreas Müller [Tue, 24 Nov 2020 11:56:40 +0000 (12:56 +0100)]
ref #9282 adapt dataset.dtd to NomenclaturalStanding
Andreas Müller [Tue, 24 Nov 2020 11:23:15 +0000 (12:23 +0100)]
preliminary fix compile error in SchemaUpdater_5185_5186
Andreas Müller [Tue, 24 Nov 2020 11:18:07 +0000 (12:18 +0100)]
cleanup
Andreas Müller [Tue, 24 Nov 2020 11:16:04 +0000 (12:16 +0100)]
ref #9272 remove invalid state from nom. ambig. and nom. confus.
Andreas Müller [Tue, 24 Nov 2020 09:55:21 +0000 (10:55 +0100)]
ref #9272, ref #5794 adapt taxon ordering to nomenclatural standing
Andreas Müller [Tue, 24 Nov 2020 09:53:37 +0000 (10:53 +0100)]
cleanup
Katja Luther [Tue, 24 Nov 2020 10:44:43 +0000 (11:44 +0100)]
add termNodeDto to list of terms of termTreeDto
Katja Luther [Tue, 24 Nov 2020 10:36:46 +0000 (11:36 +0100)]
add classification to config string
Andreas Müller [Mon, 23 Nov 2020 21:12:25 +0000 (22:12 +0100)]
ref #9279 remove redundant string and TaggedText computing and fix post separator for names type sets
Andreas Müller [Mon, 23 Nov 2020 21:10:32 +0000 (22:10 +0100)]
cleanup
Andreas Müller [Mon, 23 Nov 2020 20:14:42 +0000 (21:14 +0100)]
cleanup
Andreas Müller [Fri, 20 Nov 2020 21:00:43 +0000 (22:00 +0100)]
ref #6591 fix SingleTermRemover
Andreas Müller [Fri, 20 Nov 2020 17:23:33 +0000 (18:23 +0100)]
fix endSchemaVersion in SchemaUpdater_5184_5185
Andreas Müller [Fri, 20 Nov 2020 17:09:33 +0000 (18:09 +0100)]
update cached model to 5.18.5
Andreas Müller [Fri, 20 Nov 2020 17:05:52 +0000 (18:05 +0100)]
ref #6581 fix update script for nomenclatural sources / nomenclatural status sources
Andreas Müller [Fri, 20 Nov 2020 17:03:25 +0000 (18:03 +0100)]
finalize update script vor version 5.18.4
Andreas Müller [Fri, 20 Nov 2020 15:54:07 +0000 (16:54 +0100)]
ref #9311 adapt name parser to updated nom status labels
Andreas Müller [Fri, 20 Nov 2020 15:47:03 +0000 (16:47 +0100)]
minor
Andreas Müller [Fri, 20 Nov 2020 15:46:33 +0000 (16:46 +0100)]
ref #9311 adapt TermRepresentationUpdater for idInVoc updating
Andreas Müller [Fri, 20 Nov 2020 15:45:01 +0000 (16:45 +0100)]
ref #9272 add 5 new nomenclatural status types
Andreas Müller [Fri, 20 Nov 2020 15:40:42 +0000 (16:40 +0100)]
ref #6591 Use TaxonName.nomSource.NameUsedInSource for original spelling
Andreas Müller [Fri, 20 Nov 2020 15:33:08 +0000 (16:33 +0100)]
ref #9282 adapt NomenclaturalStatusType.csv to nomenclaturalStanding
Andreas Müller [Fri, 20 Nov 2020 15:31:06 +0000 (16:31 +0100)]
ref #9282 some final fixes and javadoc updates for NomenclaturalStatusType and nomenclaturalStanding
Andreas Müller [Fri, 20 Nov 2020 15:14:17 +0000 (16:14 +0100)]
ref #9282 adapt some nomenclatural standings in test dataset and fix/cleanup update script
Andreas Müller [Fri, 20 Nov 2020 14:58:09 +0000 (15:58 +0100)]
ref #9311 update labels in test terms
Andreas Müller [Fri, 20 Nov 2020 14:39:53 +0000 (15:39 +0100)]
ref #9282 add NomenclaturalStanding and INomenclaturalStanding and related method in TaxonName, NomenclaturalStatusType and NameRelationshipType
Andreas Müller [Fri, 20 Nov 2020 14:19:57 +0000 (15:19 +0100)]
ref #9311 update script for nom status and name rel term label updates
Andreas Müller [Fri, 20 Nov 2020 13:56:54 +0000 (14:56 +0100)]
cleanup
Katja Luther [Fri, 20 Nov 2020 10:06:55 +0000 (11:06 +0100)]
correct handling of doubtful synonyms
Katja Luther [Fri, 20 Nov 2020 10:02:02 +0000 (11:02 +0100)]
avoid NPE in Typedesignation Manager for sources without reference
Andreas Müller [Thu, 19 Nov 2020 14:09:15 +0000 (15:09 +0100)]
fix presence questionable handling in test terms
Andreas Müller [Thu, 19 Nov 2020 13:12:12 +0000 (14:12 +0100)]
Update javadoc for CdmPreference related classes.
Katja Luther [Thu, 19 Nov 2020 10:50:42 +0000 (11:50 +0100)]
PreferencePredicate condensedDistributionRecipe not only for cdmLight
Katja Luther [Thu, 19 Nov 2020 10:47:55 +0000 (11:47 +0100)]
CondensedDistributionRecipe enum is IKeyLabel
Katja Luther [Thu, 19 Nov 2020 09:12:57 +0000 (10:12 +0100)]
revert disabling condensed distr. string and add missing presence absence term
Katja Luther [Thu, 19 Nov 2020 08:04:28 +0000 (09:04 +0100)]
disable condensed distribution string in cdmlight export test
Katja Luther [Wed, 18 Nov 2020 15:50:57 +0000 (16:50 +0100)]
ref #9262: minor
Katja Luther [Wed, 18 Nov 2020 14:58:47 +0000 (15:58 +0100)]
ref #9262: add possibility to export condensed distribution string - new preference predicate
Katja Luther [Wed, 18 Nov 2020 14:47:44 +0000 (15:47 +0100)]
ref #9262: add possibility to export condensed distribution string
Andreas Müller [Wed, 18 Nov 2020 09:01:25 +0000 (10:01 +0100)]
cleanup
Andreas Müller [Wed, 18 Nov 2020 09:00:12 +0000 (10:00 +0100)]
replace links to trac tickets by links to redmine tickets in javadoc
Andreas Kohlbecker [Tue, 17 Nov 2020 16:47:15 +0000 (17:47 +0100)]
ref #9230 RegistrableEntityFilter function for type designations and using it for all relevant controller methods
Andreas Kohlbecker [Tue, 17 Nov 2020 16:24:20 +0000 (17:24 +0100)]
ref #9230 RegistrableEntityFilter to centralize filter functions
Andreas Müller [Tue, 17 Nov 2020 08:09:56 +0000 (09:09 +0100)]
ref #9204 upgrade xstream version in cdmlib
Andreas Müller [Sat, 14 Nov 2020 17:41:33 +0000 (18:41 +0100)]
ref #6591 fix SchemaUpdater_5184_5185 preliminary and add update script for moving original spellings
Andreas Müller [Sat, 14 Nov 2020 17:30:16 +0000 (18:30 +0100)]
ref #6591 fix OriginalSpellingMover
Andreas Müller [Sat, 14 Nov 2020 17:29:20 +0000 (18:29 +0100)]
ref #6591 fix SingleTermRemover
Andreas Müller [Sat, 14 Nov 2020 17:28:05 +0000 (18:28 +0100)]
ref #9302 remove bracket around year in short citations for type designations and add citationDetail to short citations
Andreas Müller [Sat, 7 Nov 2020 15:38:22 +0000 (16:38 +0100)]
cleanup
Andreas Müller [Fri, 6 Nov 2020 21:06:14 +0000 (22:06 +0100)]
ref #6591 add first version of Original Spelling Mover
Andreas Müller [Fri, 6 Nov 2020 21:05:11 +0000 (22:05 +0100)]
add SchemaUpdater_5184_5185
Andreas Kohlbecker [Thu, 12 Nov 2020 16:52:06 +0000 (17:52 +0100)]
ref #9253 removing initstrategy from DTO service method - cleaning up