em.lee [Mon, 8 Feb 2010 10:17:34 +0000 (10:17 +0000)]
Added 'limitSave' to set/get an upper limit amount of taxa to be saved at once (similar to fauna europaea configurator).
Andreas Kohlbecker [Mon, 8 Feb 2010 09:48:23 +0000 (09:48 +0000)]
missing parent pom.xml for c3p0 [change sets: 8000, 8002]
Katja Luther [Mon, 8 Feb 2010 09:31:25 +0000 (09:31 +0000)]
removed System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:27:16 +0000 (09:27 +0000)]
removed System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:20:01 +0000 (09:20 +0000)]
removed System.err.println()
Katja Luther [Mon, 8 Feb 2010 09:14:08 +0000 (09:14 +0000)]
removed system.err.println()
Katja Luther [Mon, 8 Feb 2010 09:11:49 +0000 (09:11 +0000)]
removed system.err.println()
Andreas Kohlbecker [Fri, 5 Feb 2010 12:24:27 +0000 (12:24 +0000)]
fixing jet another LazyLoadingException
Andreas Kohlbecker [Fri, 5 Feb 2010 08:58:26 +0000 (08:58 +0000)]
preparing for hibernate-c3p0 & removing out all System.err.println & avoiding proxy narrow log of hibernate
Andreas Kohlbecker [Fri, 5 Feb 2010 08:56:17 +0000 (08:56 +0000)]
improving loadRankSpecificRootNodes
Andreas Kohlbecker [Fri, 5 Feb 2010 08:48:13 +0000 (08:48 +0000)]
preparing for hibernate-c3p0 & commenting out all System.err.println
Andreas Kohlbecker [Fri, 5 Feb 2010 08:45:40 +0000 (08:45 +0000)]
improving loadRankSpecificRootNodes
Andreas Kohlbecker [Fri, 5 Feb 2010 08:43:52 +0000 (08:43 +0000)]
improving loadRankSpecificRootNodes
Andreas Müller [Tue, 2 Feb 2010 17:59:35 +0000 (17:59 +0000)]
removed citations feature from palmae feature tree (was a duplicate)
n.hoffmann [Tue, 2 Feb 2010 16:50:41 +0000 (16:50 +0000)]
Search in Taxonomic Editor runs in it's own thread now.
Andreas Müller [Tue, 2 Feb 2010 14:26:03 +0000 (14:26 +0000)]
Added citations feature to palmae feature tree
n.hoffmann [Tue, 2 Feb 2010 10:04:16 +0000 (10:04 +0000)]
Katja Luther [Fri, 29 Jan 2010 14:32:25 +0000 (14:32 +0000)]
added service to get all taxon nodes
Katja Luther [Fri, 29 Jan 2010 14:30:27 +0000 (14:30 +0000)]
fix the jaxb import/export
Katja Luther [Fri, 29 Jan 2010 14:28:04 +0000 (14:28 +0000)]
while unmarshalling the xml escaping has to be reversed
em.lee [Fri, 29 Jan 2010 14:15:36 +0000 (14:15 +0000)]
Added setter/getter for TaxonNamePropertyPath
em.lee [Fri, 29 Jan 2010 14:14:48 +0000 (14:14 +0000)]
Added setter/getter for TaxonNamePropertyPath
n.hoffmann [Fri, 29 Jan 2010 14:14:47 +0000 (14:14 +0000)]
Handle errors in Excel file
em.lee [Fri, 29 Jan 2010 14:13:59 +0000 (14:13 +0000)]
Using newly added TaxonNamePropertyPath
n.hoffmann [Fri, 29 Jan 2010 14:11:03 +0000 (14:11 +0000)]
Handle errors in Excel file
n.hoffmann [Fri, 29 Jan 2010 14:02:07 +0000 (14:02 +0000)]
Handle errors in Excel file
n.hoffmann [Fri, 29 Jan 2010 13:48:50 +0000 (13:48 +0000)]
an & in the xml lead to errors during parsing
n.hoffmann [Fri, 29 Jan 2010 13:45:27 +0000 (13:45 +0000)]
an & in the xml lead to errors during parsing
n.hoffmann [Fri, 29 Jan 2010 13:34:29 +0000 (13:34 +0000)]
XmlHelp munched exceptions. That is not very helpful.
f.revilla [Fri, 29 Jan 2010 12:49:44 +0000 (12:49 +0000)]
windows installation files
f.revilla [Fri, 29 Jan 2010 10:13:06 +0000 (10:13 +0000)]
new folder structure for installers
f.revilla [Fri, 29 Jan 2010 10:12:40 +0000 (10:12 +0000)]
new folder structure for installers
Katja Luther [Thu, 28 Jan 2010 15:38:26 +0000 (15:38 +0000)]
n.hoffmann [Thu, 28 Jan 2010 14:38:01 +0000 (14:38 +0000)]
minor
n.hoffmann [Thu, 28 Jan 2010 14:19:43 +0000 (14:19 +0000)]
matching is now configurable in the editor
Andreas Müller [Thu, 28 Jan 2010 13:34:48 +0000 (13:34 +0000)]
minor
Katja Luther [Wed, 27 Jan 2010 15:45:30 +0000 (15:45 +0000)]
n.hoffmann [Wed, 27 Jan 2010 15:02:36 +0000 (15:02 +0000)]
moved image functionality into the library
n.hoffmann [Wed, 27 Jan 2010 13:14:58 +0000 (13:14 +0000)]
moved image functionality into the library
Katja Luther [Wed, 27 Jan 2010 09:38:35 +0000 (09:38 +0000)]
n.hoffmann [Tue, 26 Jan 2010 17:48:11 +0000 (17:48 +0000)]
fixes #1407
n.hoffmann [Tue, 26 Jan 2010 17:39:30 +0000 (17:39 +0000)]
n.hoffmann [Mon, 25 Jan 2010 14:09:46 +0000 (14:09 +0000)]
Latest TaxonX files for palms import added
ben.clark [Fri, 22 Jan 2010 16:24:52 +0000 (16:24 +0000)]
Added WorkingSetDao & Service
ben.clark [Fri, 22 Jan 2010 16:24:25 +0000 (16:24 +0000)]
Added WorkingSetDao & Service
ben.clark [Fri, 22 Jan 2010 16:23:34 +0000 (16:23 +0000)]
Changes to NonViralName.getTitleCache()
n.hoffmann [Fri, 22 Jan 2010 14:34:08 +0000 (14:34 +0000)]
getMatchMode() in DefaultMatchStrategy is now failsafe
n.hoffmann [Thu, 21 Jan 2010 19:30:13 +0000 (19:30 +0000)]
moved functionality from editor to library
n.hoffmann [Thu, 21 Jan 2010 10:34:57 +0000 (10:34 +0000)]
Andreas Kohlbecker [Wed, 20 Jan 2010 12:56:21 +0000 (12:56 +0000)]
shorter timeout for metadata service
Andreas Kohlbecker [Tue, 19 Jan 2010 20:29:22 +0000 (20:29 +0000)]
mini fix
Andreas Kohlbecker [Tue, 19 Jan 2010 16:44:54 +0000 (16:44 +0000)]
allowing to write
n.hoffmann [Tue, 19 Jan 2010 15:18:15 +0000 (15:18 +0000)]
FeatureTreeService now returns a default FeatureTree when no tree is in database. Testing it with portal now.
ben.clark [Sun, 17 Jan 2010 19:39:07 +0000 (19:39 +0000)]
Added constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRelationship.relatedFrom & SynonymRelationship.relatedTo to mark orphaned synonyms as invalid. [https://dev.e-taxonomy.eu/trac/ticket/1347]
Also, added constraint such that two accepted names or an accepted name and a synonym with the same sec reference and the same name are invalid.
ben.clark [Sun, 17 Jan 2010 19:38:50 +0000 (19:38 +0000)]
Added constraints to Taxon.synonymRelations, Synonym.synonymRelations, and SynonymRelationship.relatedFrom & SynonymRelationship.relatedTo to mark orphaned synonyms as invalid. [https://dev.e-taxonomy.eu/trac/ticket/1347]
Also, added constraint such that two accepted names or an accepted name and a synonym with the same sec reference and the same name are invalid.
m.venin [Fri, 15 Jan 2010 16:19:18 +0000 (16:19 +0000)]
Trace
Andreas Kohlbecker [Fri, 15 Jan 2010 16:14:54 +0000 (16:14 +0000)]
Trace v2
Andreas Kohlbecker [Fri, 15 Jan 2010 16:10:36 +0000 (16:10 +0000)]
Trace
Andreas Kohlbecker [Fri, 15 Jan 2010 16:07:01 +0000 (16:07 +0000)]
test commit
Katja Luther [Fri, 15 Jan 2010 12:24:51 +0000 (12:24 +0000)]
Katja Luther [Fri, 15 Jan 2010 12:23:11 +0000 (12:23 +0000)]
Katja Luther [Fri, 15 Jan 2010 12:22:44 +0000 (12:22 +0000)]
in xml file taxonnode is referenced by id
#1277 jaxb import
Katja Luther [Fri, 15 Jan 2010 12:21:23 +0000 (12:21 +0000)]
#1277 jaxb import, set id to @XmlTransient
Katja Luther [Fri, 15 Jan 2010 12:20:12 +0000 (12:20 +0000)]
#1277 jaxb import
em.lee [Fri, 15 Jan 2010 11:11:03 +0000 (11:11 +0000)]
Added isDatabaseSchemaCompatible().
em.lee [Fri, 15 Jan 2010 11:10:38 +0000 (11:10 +0000)]
Added isDatabaseSchemaCompatible().
ben.clark [Wed, 13 Jan 2010 16:52:31 +0000 (16:52 +0000)]
Corrected bug in AuditEventDao
Andreas Kohlbecker [Wed, 13 Jan 2010 12:01:35 +0000 (12:01 +0000)]
management service (/manager/datasources/*) ( and management page (/index.jsp)
Andreas Kohlbecker [Wed, 13 Jan 2010 11:59:31 +0000 (11:59 +0000)]
improving datasource management
Katja Luther [Wed, 13 Jan 2010 10:46:52 +0000 (10:46 +0000)]
Katja Luther [Wed, 13 Jan 2010 10:46:31 +0000 (10:46 +0000)]
Katja Luther [Wed, 13 Jan 2010 10:46:22 +0000 (10:46 +0000)]
Katja Luther [Wed, 13 Jan 2010 10:38:59 +0000 (10:38 +0000)]
new test for the delete method of TaxonNameDao
Katja Luther [Wed, 13 Jan 2010 10:31:12 +0000 (10:31 +0000)]
implement the delete method, to delete the refering taxonbases #1390
ben.clark [Tue, 12 Jan 2010 15:54:28 +0000 (15:54 +0000)]
Added protected setter methods to Synonym.synonymRelations and Taxon.relationsToThisTaxon to allow bean initialization
em.lee [Tue, 12 Jan 2010 13:45:50 +0000 (13:45 +0000)]
#1279
em.lee [Tue, 12 Jan 2010 13:45:22 +0000 (13:45 +0000)]
#1279
Andreas Kohlbecker [Tue, 12 Jan 2010 08:59:55 +0000 (08:59 +0000)]
minor change
ben.clark [Mon, 11 Jan 2010 16:17:54 +0000 (16:17 +0000)]
fixed bug in listDescriptions
ben.clark [Mon, 11 Jan 2010 16:08:25 +0000 (16:08 +0000)]
Updated cascade sematics for determinations
Katja Luther [Mon, 11 Jan 2010 14:28:03 +0000 (14:28 +0000)]
#1390
Katja Luther [Mon, 11 Jan 2010 14:15:03 +0000 (14:15 +0000)]
#1390
Katja Luther [Mon, 11 Jan 2010 14:14:52 +0000 (14:14 +0000)]
#1390
em.lee [Fri, 8 Jan 2010 16:45:47 +0000 (16:45 +0000)]
Preparatory work for ticket #1347.
em.lee [Fri, 8 Jan 2010 16:45:21 +0000 (16:45 +0000)]
Preparatory work for ticket #1347.
em.lee [Fri, 8 Jan 2010 16:44:56 +0000 (16:44 +0000)]
Preparatory work for ticket #1347.
n.hoffmann [Fri, 8 Jan 2010 16:41:56 +0000 (16:41 +0000)]
fixes #1365 and #1366
ben.clark [Fri, 8 Jan 2010 12:40:46 +0000 (12:40 +0000)]
Allowed replace(T x, T y) to accept null for the second argument and globally replace x with null or remove x from collections
ben.clark [Thu, 7 Jan 2010 22:02:15 +0000 (22:02 +0000)]
Altered ReferringObjectMetadataFactoryImpl to exclude bidirectional relationships where the replaced entity is the "owner" of the related entity (i.e. the relationship is mapped by @OneToMany & mappedBy != null) since those kind of relationships don't make sense in the context of a global replace method.
n.hoffmann [Thu, 7 Jan 2010 10:52:39 +0000 (10:52 +0000)]
Implemented a new method to return taxon relationships that are between two taxa.
n.hoffmann [Thu, 7 Jan 2010 10:42:38 +0000 (10:42 +0000)]
fixes #1357
ben.clark [Wed, 6 Jan 2010 23:10:30 +0000 (23:10 +0000)]
Updated ICdmEntityDao replace(T x, T y) and refresh(T t, LockMode lockMode, List<String> propertyPaths) and added methods to IAnnotationDao
ben.clark [Wed, 6 Jan 2010 23:09:17 +0000 (23:09 +0000)]
Updated ICdmEntityDao replace(T x, T y) and refresh(T t, LockMode lockMode, List<String> propertyPaths) and added methods to IAnnotationDao
em.lee [Tue, 5 Jan 2010 15:23:48 +0000 (15:23 +0000)]
On behalf of Niels: Check for multiple parents changed in addParentChild()
n.hoffmann [Tue, 5 Jan 2010 14:52:10 +0000 (14:52 +0000)]
fixes #1343
n.hoffmann [Mon, 4 Jan 2010 12:35:45 +0000 (12:35 +0000)]
fixes #1022
n.hoffmann [Mon, 4 Jan 2010 12:23:58 +0000 (12:23 +0000)]
fixes an issue with bulk adding of taxon nodes to a taxonomic tree
ben.clark [Wed, 23 Dec 2009 16:03:28 +0000 (16:03 +0000)]
ReferringObjectMetadata now queries higher up the hierarchy of classes to obtain a reference to a property
ben.clark [Tue, 22 Dec 2009 19:19:29 +0000 (19:19 +0000)]
Added public T replace(T x, T y) to ICdmEntityDao, implementation and tests
ben.clark [Tue, 22 Dec 2009 19:16:09 +0000 (19:16 +0000)]
Added public T replace(T x, T y) to ICdmEntityDao, implementation and tests