Patric Plitzner [Wed, 29 Oct 2014 10:39:34 +0000 (10:39 +0000)]
- added exception throwing to URI assembly in Sequence class
- handled exception in editor details view
Patric Plitzner [Tue, 28 Oct 2014 18:24:53 +0000 (18:24 +0000)]
- adapted derivate hierarchy assembly to cdmlib3.4 changes (TissueSample, DnaSample as one class)
Patric Plitzner [Tue, 28 Oct 2014 18:20:15 +0000 (18:20 +0000)]
- extended init test
Patric Plitzner [Tue, 28 Oct 2014 14:27:22 +0000 (14:27 +0000)]
- made constructor protected to avoid JavaAssistEnhancementException
Katja Luther [Tue, 28 Oct 2014 13:09:11 +0000 (13:09 +0000)]
fix #4450
Alexander Oppermann [Tue, 28 Oct 2014 13:07:14 +0000 (13:07 +0000)]
Changes for production mode for vaadin
Alexander Oppermann [Mon, 27 Oct 2014 15:37:56 +0000 (15:37 +0000)]
changed startup parameter for vaadin. Only for testing.
Alexander Oppermann [Mon, 27 Oct 2014 10:38:08 +0000 (10:38 +0000)]
latest changes for Vaadin Editor
* added in Web.XML production mode
Katja Luther [Mon, 27 Oct 2014 10:21:22 +0000 (10:21 +0000)]
Katja Luther [Mon, 27 Oct 2014 10:20:34 +0000 (10:20 +0000)]
Patric Plitzner [Mon, 27 Oct 2014 08:09:41 +0000 (08:09 +0000)]
- added service method deleteDerivateHierarchy()
Andreas Müller [Thu, 23 Oct 2014 11:44:17 +0000 (11:44 +0000)]
remove NOT NULL on OriginalSourceType_AUD.sourceType on existing data #4445
Andreas Müller [Thu, 23 Oct 2014 07:20:18 +0000 (07:20 +0000)]
revert contact URLs #3920, #4444
Andreas Müller [Wed, 22 Oct 2014 20:57:50 +0000 (20:57 +0000)]
workaround for Contact.urls to solve #4444 preliminary
Andreas Müller [Wed, 22 Oct 2014 16:54:40 +0000 (16:54 +0000)]
last update to schema updater 34.
Alexander Oppermann [Wed, 22 Oct 2014 16:01:47 +0000 (16:01 +0000)]
removed useless widgetset
Alexander Oppermann [Wed, 22 Oct 2014 16:00:37 +0000 (16:00 +0000)]
Vaadin Exception handling and minor changes
Alexander Oppermann [Wed, 22 Oct 2014 15:54:24 +0000 (15:54 +0000)]
Vaadin Exception handling and minor changes
Andreas Müller [Wed, 22 Oct 2014 14:51:42 +0000 (14:51 +0000)]
fix uuid as UniqueKey problem
Andreas Müller [Wed, 22 Oct 2014 13:48:24 +0000 (13:48 +0000)]
reduce size of contact URI due to key length problems
Andreas Müller [Tue, 21 Oct 2014 23:28:22 +0000 (23:28 +0000)]
update fullCoverageDataGenerator
Andreas Müller [Tue, 21 Oct 2014 22:35:25 +0000 (22:35 +0000)]
latest Datasource version
Andreas Müller [Tue, 21 Oct 2014 22:31:34 +0000 (22:31 +0000)]
add WebPageDefaultCacheStrategyTest
Andreas Müller [Tue, 21 Oct 2014 22:12:51 +0000 (22:12 +0000)]
update remote-WebApp H2 database
Andreas Müller [Tue, 21 Oct 2014 21:36:58 +0000 (21:36 +0000)]
update cdmTest version for remoteWebApp
Andreas Müller [Tue, 21 Oct 2014 20:17:14 +0000 (20:17 +0000)]
H2 update script fixes in trunk
Andreas Müller [Tue, 21 Oct 2014 20:11:38 +0000 (20:11 +0000)]
merge cdmlib-3.4 branch into trunk
Andreas Müller [Tue, 21 Oct 2014 13:57:29 +0000 (13:57 +0000)]
integrate latest changes to branche 3.4
Andreas Müller [Tue, 21 Oct 2014 13:43:53 +0000 (13:43 +0000)]
add full data call
Andreas Müller [Tue, 21 Oct 2014 13:42:14 +0000 (13:42 +0000)]
latest fullCoverDaGet
Patric Plitzner [Tue, 21 Oct 2014 13:36:07 +0000 (13:36 +0000)]
- removed accidentally committed class
Andreas Müller [Tue, 21 Oct 2014 13:33:47 +0000 (13:33 +0000)]
remove view from fullCoveragedatagen
Patric Plitzner [Tue, 21 Oct 2014 13:32:14 +0000 (13:32 +0000)]
- merge-update from trunk
Andreas Müller [Tue, 21 Oct 2014 13:31:53 +0000 (13:31 +0000)]
latest version for Datasource
Patric Plitzner [Tue, 21 Oct 2014 13:29:26 +0000 (13:29 +0000)]
merge-update from trunk
Andreas Müller [Tue, 21 Oct 2014 13:24:59 +0000 (13:24 +0000)]
new convenience method
Patric Plitzner [Tue, 21 Oct 2014 12:58:38 +0000 (12:58 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 21 Oct 2014 12:56:55 +0000 (12:56 +0000)]
- no change (just updated "last edited" for svn)
Patric Plitzner [Tue, 21 Oct 2014 12:53:42 +0000 (12:53 +0000)]
merge-update from trunk
Patric Plitzner [Tue, 21 Oct 2014 12:50:33 +0000 (12:50 +0000)]
merge-update from trunk
Andreas Müller [Tue, 21 Oct 2014 12:16:16 +0000 (12:16 +0000)]
final version of FullCoverageDataGenerator for v3.3
Andreas Müller [Tue, 21 Oct 2014 12:15:15 +0000 (12:15 +0000)]
fix NOMECLATURAL_REFERENCES in Statistics controller
Alexander Oppermann [Tue, 21 Oct 2014 12:04:43 +0000 (12:04 +0000)]
changed scope of main view
Andreas Müller [Tue, 21 Oct 2014 11:59:33 +0000 (11:59 +0000)]
fix init problem for DnaSample
Alexander Oppermann [Tue, 21 Oct 2014 11:59:03 +0000 (11:59 +0000)]
updated widgetset version number. increased Vaadin version number too.
Andreas Müller [Tue, 21 Oct 2014 11:47:09 +0000 (11:47 +0000)]
minor
Andreas Müller [Tue, 21 Oct 2014 11:21:50 +0000 (11:21 +0000)]
bugfix for clone and setDnaSample
Andreas Müller [Tue, 21 Oct 2014 11:15:59 +0000 (11:15 +0000)]
remove debug
Andreas Müller [Tue, 21 Oct 2014 11:15:21 +0000 (11:15 +0000)]
new NewInstance for TermVocabulary
Andreas Müller [Tue, 21 Oct 2014 11:12:56 +0000 (11:12 +0000)]
latest updates to FullCoverageDataGenerator
Patric Plitzner [Tue, 21 Oct 2014 10:48:38 +0000 (10:48 +0000)]
- adapted to cdm3.4 changes
Patric Plitzner [Tue, 21 Oct 2014 10:42:55 +0000 (10:42 +0000)]
merge-update from trunk
Andreas Müller [Tue, 21 Oct 2014 09:52:04 +0000 (09:52 +0000)]
add a bit more bidirectionality to DnaSample/Sequence
Andreas Müller [Tue, 21 Oct 2014 05:51:06 +0000 (05:51 +0000)]
return nameRelationship
Andreas Müller [Mon, 20 Oct 2014 23:32:53 +0000 (23:32 +0000)]
preliminary remove data generator
Andreas Müller [Mon, 20 Oct 2014 23:23:11 +0000 (23:23 +0000)]
preliminary remove data generator
Andreas Müller [Mon, 20 Oct 2014 23:21:18 +0000 (23:21 +0000)]
improve FullCoverageDataGenerator
Andreas Müller [Mon, 20 Oct 2014 22:25:24 +0000 (22:25 +0000)]
cascade SingleRead.materialOrMethod
Andreas Müller [Mon, 20 Oct 2014 19:14:52 +0000 (19:14 +0000)]
allow saving FullDataGenerator data through API (preliminary)
Andreas Müller [Mon, 20 Oct 2014 18:51:22 +0000 (18:51 +0000)]
minor
Andreas Müller [Mon, 20 Oct 2014 18:21:02 +0000 (18:21 +0000)]
add validation framework classes #4439
Andreas Müller [Mon, 20 Oct 2014 18:14:24 +0000 (18:14 +0000)]
add purificationMethod to update script
Andreas Müller [Mon, 20 Oct 2014 18:02:45 +0000 (18:02 +0000)]
further changes to DnaQuality #4434 and update script for ValidationFramework alpha version
Andreas Müller [Mon, 20 Oct 2014 16:04:49 +0000 (16:04 +0000)]
fix methods for new TableCreator constructor
Andreas Müller [Mon, 20 Oct 2014 16:04:11 +0000 (16:04 +0000)]
minor
Alexander Oppermann [Mon, 20 Oct 2014 14:36:49 +0000 (14:36 +0000)]
latest changes for VaadinPrototype
* paged tables
* lazy loaded container
* crud functionality for distribution status
* classification selection view
* named area selection view
removed deprecated mortbay logger in MediaController not only because it is deprecated but also because of conflicts with vaadin framework
Andreas Müller [Mon, 20 Oct 2014 13:35:38 +0000 (13:35 +0000)]
make primer.sequence a SequenceString #4139
Patric Plitzner [Mon, 20 Oct 2014 12:23:48 +0000 (12:23 +0000)]
- extended test
Andreas Müller [Mon, 20 Oct 2014 12:17:46 +0000 (12:17 +0000)]
add indexed adder and remove method to identifier list
Patric Plitzner [Mon, 20 Oct 2014 12:15:29 +0000 (12:15 +0000)]
- fixed service method and extended test
Patric Plitzner [Mon, 20 Oct 2014 11:18:35 +0000 (11:18 +0000)]
merge-update from trunk
Andreas Müller [Sat, 18 Oct 2014 02:27:59 +0000 (02:27 +0000)]
add i18n description for Classification. #4428
Andreas Müller [Sat, 18 Oct 2014 01:58:58 +0000 (01:58 +0000)]
Geo and time scope for Classifications #3699
Andreas Müller [Sat, 18 Oct 2014 01:51:50 +0000 (01:51 +0000)]
Geo and time scope for Classifications #3699
Andreas Müller [Sat, 18 Oct 2014 01:14:07 +0000 (01:14 +0000)]
first implementation for DnaQuality #4434
Andreas Müller [Fri, 17 Oct 2014 22:30:13 +0000 (22:30 +0000)]
Make Contact URL an url #3920
Andreas Müller [Fri, 17 Oct 2014 21:45:31 +0000 (21:45 +0000)]
Make Contact URL an url #3920
Andreas Müller [Fri, 17 Oct 2014 21:04:44 +0000 (21:04 +0000)]
remove View class #4316 and update script for authorTeam rename #4432
Andreas Müller [Fri, 17 Oct 2014 20:31:17 +0000 (20:31 +0000)]
rename Reference.authorTeam -> authorship #4432
Andreas Müller [Fri, 17 Oct 2014 20:00:14 +0000 (20:00 +0000)]
rename Reference.authorTeam -> authorship #4432
Andreas Müller [Fri, 17 Oct 2014 19:51:23 +0000 (19:51 +0000)]
minor
Andreas Müller [Fri, 17 Oct 2014 19:50:32 +0000 (19:50 +0000)]
clean up Endnote import
Andreas Müller [Fri, 17 Oct 2014 19:31:28 +0000 (19:31 +0000)]
adapt tests to missing Reference.series #4293 and not null constraint for test database ddl #4382
Andreas Müller [Fri, 17 Oct 2014 19:03:37 +0000 (19:03 +0000)]
added NotNull constraints to User.username, Group.name, GrantedAuthorityImpl.authority #4382
Andreas Müller [Fri, 17 Oct 2014 18:56:09 +0000 (18:56 +0000)]
rename Reference.authorTeam -> authorship #4432
Andreas Müller [Fri, 17 Oct 2014 18:53:43 +0000 (18:53 +0000)]
rename Reference.authorTeam -> authorship #4432
Andreas Müller [Fri, 17 Oct 2014 18:15:02 +0000 (18:15 +0000)]
adapt tests to missing Reference.series #4293
Andreas Müller [Fri, 17 Oct 2014 18:10:04 +0000 (18:10 +0000)]
minor
Andreas Müller [Fri, 17 Oct 2014 18:06:31 +0000 (18:06 +0000)]
remove series from Reference #4293
Andreas Müller [Fri, 17 Oct 2014 17:33:40 +0000 (17:33 +0000)]
add IdentifierType Vocabulary
Andreas Müller [Fri, 17 Oct 2014 16:49:00 +0000 (16:49 +0000)]
fix update script to run with MySQL, add TermType IdentifierType, add List index on identifiers
Andreas Müller [Fri, 17 Oct 2014 14:13:42 +0000 (14:13 +0000)]
adapt tests to 3.4
Andreas Müller [Fri, 17 Oct 2014 12:11:40 +0000 (12:11 +0000)]
merge trunk for pom.xml
Andreas Müller [Fri, 17 Oct 2014 10:41:06 +0000 (10:41 +0000)]
minor
Andreas Müller [Fri, 17 Oct 2014 10:40:34 +0000 (10:40 +0000)]
latest update script update
Andreas Müller [Fri, 17 Oct 2014 10:38:55 +0000 (10:38 +0000)]
make Identifiers a List
Patric Plitzner [Thu, 16 Oct 2014 14:35:23 +0000 (14:35 +0000)]
merge-update from trunk
Patric Plitzner [Thu, 16 Oct 2014 07:15:41 +0000 (07:15 +0000)]
- extended ABCD import test to check for AgentBase
Patric Plitzner [Thu, 16 Oct 2014 07:14:52 +0000 (07:14 +0000)]
- added additional ABCD path to search for gathering agents
Andreas Müller [Wed, 15 Oct 2014 12:22:29 +0000 (12:22 +0000)]
minor
BGBM BDI Projects / cdmlib.git / log