Andreas Müller [Fri, 22 Sep 2017 12:40:48 +0000 (14:40 +0200)]
ref #6730 further simplify/unify MediaServiceImpl.delete code
Andreas Müller [Fri, 22 Sep 2017 11:48:11 +0000 (13:48 +0200)]
ref #6730 move updatedObject decleration into loop
Katja Luther [Fri, 22 Sep 2017 08:06:31 +0000 (10:06 +0200)]
ref #/6730: add all updated objcts to the deleteResult
Andreas Müller [Thu, 21 Sep 2017 20:51:24 +0000 (22:51 +0200)]
ref #6730 try to remove compilation problem in MediaServiceImpl.delete
Andreas Müller [Thu, 21 Sep 2017 20:06:03 +0000 (22:06 +0200)]
ref #6730 remove some further redundant code in MediaServiceImpl.delete
Katja Luther [Thu, 21 Sep 2017 18:55:52 +0000 (20:55 +0200)]
fix #6730: handle description elements of taxa, names and specimen all the same in media delete
Katja Luther [Thu, 21 Sep 2017 15:59:25 +0000 (17:59 +0200)]
add try/catch for handling of description elements
Andreas Müller [Thu, 21 Sep 2017 15:49:50 +0000 (17:49 +0200)]
ref #6730 cleanup
Andreas Kohlbecker [Thu, 21 Sep 2017 13:56:33 +0000 (15:56 +0200)]
ref #6964 Registration webservice endpoint for names
Andreas Kohlbecker [Thu, 21 Sep 2017 13:29:50 +0000 (15:29 +0200)]
ref #6964 base implementation of the RegistrationController
Katja Luther [Thu, 21 Sep 2017 09:00:26 +0000 (11:00 +0200)]
add new enum ExportType
Katja Luther [Thu, 21 Sep 2017 08:49:29 +0000 (10:49 +0200)]
the export result needs to know from which kind of export it is
Andreas Müller [Wed, 20 Sep 2017 13:14:16 +0000 (15:14 +0200)]
cleanup
Katja Luther [Wed, 20 Sep 2017 12:22:23 +0000 (14:22 +0200)]
fix creation of new namedAreas in specimen import and search for isocode
Andreas Müller [Wed, 20 Sep 2017 12:11:19 +0000 (14:11 +0200)]
ref #6960
Katja Luther [Wed, 20 Sep 2017 10:50:02 +0000 (12:50 +0200)]
fix gatheringAgent import in ABCD Import
Katja Luther [Wed, 20 Sep 2017 08:09:20 +0000 (10:09 +0200)]
ref #6627: use taxonnodeFilter and partitioner for cdmLightExport
Katja Luther [Tue, 19 Sep 2017 13:28:08 +0000 (15:28 +0200)]
pass the vocService to the setCountry method
Andreas Müller [Tue, 19 Sep 2017 10:50:39 +0000 (12:50 +0200)]
ref #6957 first version of viral name cache strategy
Katja Luther [Fri, 15 Sep 2017 12:24:24 +0000 (14:24 +0200)]
add the new created namedArea for gathering event to a vocabulary in specimen import
Katja Luther [Fri, 15 Sep 2017 12:22:16 +0000 (14:22 +0200)]
ref #6933: selected taxonNode is exported as well
Katja Luther [Fri, 15 Sep 2017 12:10:24 +0000 (14:10 +0200)]
create new Area for GatheringArea with label and add to Vocabulary
Andreas Kohlbecker [Fri, 15 Sep 2017 08:58:45 +0000 (10:58 +0200)]
fix #6948 ref #6324 commenting and removing broken dozer mapping for synonymRelations
Andreas Kohlbecker [Fri, 15 Sep 2017 08:19:04 +0000 (10:19 +0200)]
fix #6836 adding missing SwaggerGroup for static OAI-PMH doc
Katja Luther [Fri, 15 Sep 2017 08:42:18 +0000 (10:42 +0200)]
fix cdm light export only for taxonnodes
Katja Luther [Fri, 15 Sep 2017 07:38:49 +0000 (09:38 +0200)]
ref #6730: updated objects need to be saved if media is deleted
Katja Luther [Fri, 15 Sep 2017 07:18:36 +0000 (09:18 +0200)]
ref #6730:adapt the messages
Katja Luther [Fri, 15 Sep 2017 07:15:23 +0000 (09:15 +0200)]
ref #6730: minor
Katja Luther [Fri, 15 Sep 2017 07:13:18 +0000 (09:13 +0200)]
ref #6730: fix delete media if it is used in taxonnamedescription
Katja Luther [Thu, 14 Sep 2017 19:26:59 +0000 (21:26 +0200)]
minor
Katja Luther [Thu, 14 Sep 2017 19:16:30 +0000 (21:16 +0200)]
minor
Katja Luther [Thu, 14 Sep 2017 19:10:09 +0000 (21:10 +0200)]
remove setSecundum in io package
Katja Luther [Thu, 14 Sep 2017 18:45:53 +0000 (20:45 +0200)]
fix abcd import for associated units
Katja Luther [Thu, 14 Sep 2017 18:44:10 +0000 (20:44 +0200)]
minor
Katja Luther [Thu, 14 Sep 2017 18:39:35 +0000 (20:39 +0200)]
add monitoredService method for setsecundum
Katja Luther [Thu, 14 Sep 2017 14:11:37 +0000 (16:11 +0200)]
ref #6730: set result to Abort if media is used elsewhere
Andreas Müller [Thu, 14 Sep 2017 09:08:32 +0000 (11:08 +0200)]
fix #6842 fix bugs in Registration.setName
Andreas Müller [Wed, 13 Sep 2017 21:57:01 +0000 (23:57 +0200)]
cleanup
Andreas Müller [Wed, 13 Sep 2017 21:56:35 +0000 (23:56 +0200)]
fix #3740 implement setPublish for subtrees
Andreas Müller [Wed, 13 Sep 2017 15:09:39 +0000 (17:09 +0200)]
ref #3740 further refactor operations in io layer and add publishForSubtreeUpdater
Andreas Müller [Wed, 13 Sep 2017 14:39:03 +0000 (16:39 +0200)]
ref #3740 refactor operations in io layer
* move operations and operation configurators to a separate package (remove from common package) as they are not realy related to import or export
* operations are long running tasks using the io framework but not importing or exporting data
Katja Luther [Tue, 12 Sep 2017 07:13:41 +0000 (09:13 +0200)]
ABCD import:set fieldUnit in derivedUnitFace after creation to avoid new creation of fieldUnit
Andreas Kohlbecker [Mon, 11 Sep 2017 08:52:56 +0000 (10:52 +0200)]
adapting test to updated data at BHL and adding comment about pars problem (ref #6939)
Andreas Müller [Fri, 8 Sep 2017 15:19:10 +0000 (17:19 +0200)]
revert ignore on Mobot test
Andreas Müller [Fri, 8 Sep 2017 14:24:59 +0000 (16:24 +0200)]
revert MediaUtils
Andreas Müller [Fri, 8 Sep 2017 14:23:56 +0000 (16:23 +0200)]
set Mobot test to ignore preliminary
Katja Luther [Fri, 8 Sep 2017 12:38:55 +0000 (14:38 +0200)]
cdmLight export: add classification export again
Katja Luther [Fri, 8 Sep 2017 12:19:23 +0000 (14:19 +0200)]
adapt cdmLightExport for using TaxonNodeFilter
Katja Luther [Thu, 7 Sep 2017 07:19:21 +0000 (09:19 +0200)]
fix deletion of classification with no rootNode
Andreas Müller [Thu, 7 Sep 2017 13:20:12 +0000 (15:20 +0200)]
revert changes to MediaUtils
Andreas Müller [Thu, 7 Sep 2017 13:14:58 +0000 (15:14 +0200)]
revert DwcaImport changes
Andreas Müller [Thu, 7 Sep 2017 13:09:45 +0000 (15:09 +0200)]
remove deprecated in NomenclaturalCode constructor
Andreas Müller [Thu, 7 Sep 2017 11:39:25 +0000 (13:39 +0200)]
cleanup
Andreas Müller [Mon, 4 Sep 2017 13:04:00 +0000 (15:04 +0200)]
ref #6887 handle modified in CoL import
Andreas Müller [Mon, 4 Sep 2017 13:02:27 +0000 (15:02 +0200)]
cleanup
Andreas Müller [Mon, 4 Sep 2017 12:59:27 +0000 (14:59 +0200)]
ref #6887 handle modified in CoL import
Andreas Müller [Sat, 5 Aug 2017 07:21:51 +0000 (09:21 +0200)]
ref #6887 handle occurrenceStatus and establishementMeans in CoL
Andreas Müller [Sat, 5 Aug 2017 07:21:07 +0000 (09:21 +0200)]
ref #6887 handle extinct and modified in CoL
Katja Luther [Wed, 6 Sep 2017 08:57:57 +0000 (10:57 +0200)]
ref #6928: correct javadoc for changeSynonymtoRelatedTaxon and changeRelatedTaxonToSynonym
Katja Luther [Wed, 6 Sep 2017 08:12:08 +0000 (10:12 +0200)]
add setResultTransformer(Criteria.DISTINCT_ROOT_ENTITY) to avoid duplicates caused by several representations of a vocabulary
Katja Luther [Mon, 4 Sep 2017 13:00:16 +0000 (15:00 +0200)]
fix simple facts for simple facts without text
Katja Luther [Fri, 1 Sep 2017 09:09:19 +0000 (11:09 +0200)]
minor
Katja Luther [Fri, 1 Sep 2017 07:43:57 +0000 (09:43 +0200)]
fix #6799: add totalCount of ticks as totalwork and start the progress monitor when this is calculated
Katja Luther [Fri, 1 Sep 2017 06:53:41 +0000 (08:53 +0200)]
ref #6799: start the progress monitor
Katja Luther [Fri, 1 Sep 2017 06:48:17 +0000 (08:48 +0200)]
avoid NPE in deleteChildNode
Katja Luther [Fri, 1 Sep 2017 06:34:06 +0000 (08:34 +0200)]
ref #6799: use the progress monitor of the configurator
Katja Luther [Fri, 1 Sep 2017 06:22:17 +0000 (08:22 +0200)]
ref #6627: facts containing only media exported to an media table
Katja Luther [Mon, 21 Aug 2017 08:00:10 +0000 (10:00 +0200)]
fix bug in sortindex updater
Katja Luther [Thu, 17 Aug 2017 11:26:10 +0000 (13:26 +0200)]
minor
Katja Luther [Thu, 17 Aug 2017 11:19:37 +0000 (13:19 +0200)]
minor
Katja Luther [Thu, 17 Aug 2017 10:43:30 +0000 (12:43 +0200)]
fix media delete, remove descriptionElement from description if it does not contain any media anymore
Katja Luther [Wed, 16 Aug 2017 13:14:03 +0000 (15:14 +0200)]
improve delete of shared media
Katja Luther [Tue, 15 Aug 2017 08:03:10 +0000 (10:03 +0200)]
ref #6828:adapt cache updater to work for specimenOrObservationBase
Andreas Kohlbecker [Mon, 7 Aug 2017 10:33:17 +0000 (12:33 +0200)]
Revert "ref #6886 test to repoduce issue with users having only CREATE permission"
This reverts commit
3795d1bf926c9b126317a85d880235301a0a4b16.
Andreas Müller [Fri, 4 Aug 2017 23:38:30 +0000 (01:38 +0200)]
ref #6887 and ref #5173 improve area handling for CoL distribution import
Andreas Müller [Fri, 4 Aug 2017 23:36:44 +0000 (01:36 +0200)]
ref #6887 handle non LSID identifiers in CoL import
Andreas Müller [Fri, 4 Aug 2017 23:35:14 +0000 (01:35 +0200)]
ref #6887 handle languages in DwCA CoL import
Andreas Müller [Fri, 4 Aug 2017 23:29:05 +0000 (01:29 +0200)]
ref #6887 add description.txt to CoL import
* add DISTRIBUTION_GENERAL to Feature static methods
* import fields with default values
Andreas Müller [Fri, 4 Aug 2017 15:37:16 +0000 (17:37 +0200)]
cleanup
Andreas Kohlbecker [Fri, 4 Aug 2017 11:14:56 +0000 (13:14 +0200)]
ref #6886 test to repoduce issue with users having only CREATE permission
Andreas Müller [Thu, 3 Aug 2017 17:32:59 +0000 (19:32 +0200)]
ref #6880 fix seiralizable problem for new HibernateConfiguration
Andreas Müller [Thu, 3 Aug 2017 15:08:01 +0000 (17:08 +0200)]
fix compilation issue in PartitionableConverterBase
Andreas Müller [Thu, 3 Aug 2017 14:23:29 +0000 (16:23 +0200)]
fix inadequate logging in stream partitioner
Andreas Müller [Thu, 3 Aug 2017 14:07:17 +0000 (16:07 +0200)]
fix #6880 allow explicitly define hibernate configurations in applicationController
* e.g. switch of auditing for long running imports
Andreas Müller [Wed, 2 Aug 2017 21:47:28 +0000 (23:47 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 21:32:51 +0000 (23:32 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 19:09:25 +0000 (21:09 +0200)]
ref #5713 fix #5713 (partly or fully)
Andreas Müller [Wed, 2 Aug 2017 19:08:38 +0000 (21:08 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 15:44:57 +0000 (17:44 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 10:49:34 +0000 (12:49 +0200)]
ref #6684 handle casting and null for preferred media part
Andreas Müller [Wed, 2 Aug 2017 10:06:27 +0000 (12:06 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 08:45:44 +0000 (10:45 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 08:20:43 +0000 (10:20 +0200)]
cleanup
Andreas Müller [Wed, 2 Aug 2017 08:20:01 +0000 (10:20 +0200)]
fix potential NPE
Andreas Müller [Tue, 1 Aug 2017 11:56:03 +0000 (13:56 +0200)]
cleanup
Andreas Kohlbecker [Mon, 31 Jul 2017 07:48:05 +0000 (09:48 +0200)]
fix #6856 adding group Admin to FirstDataInserter
Andreas Kohlbecker [Thu, 27 Jul 2017 08:48:29 +0000 (10:48 +0200)]
ref #6852 introducing a DummyDataInserter to be used instead of null
Andreas Kohlbecker [Tue, 25 Jul 2017 10:42:31 +0000 (12:42 +0200)]
ref #6855 ICdmPermissionEvaluator method which tests by CdmBase type and does not require an instance
Andreas Kohlbecker [Tue, 25 Jul 2017 09:20:17 +0000 (11:20 +0200)]
ref #6853 increasing log level for unimplemented security critical method
Andreas Kohlbecker [Tue, 25 Jul 2017 08:51:34 +0000 (10:51 +0200)]
ref #6852 RunAsAuthenticator as abstract base class for all data inserters