Andreas Müller [Fri, 30 Oct 2020 11:34:56 +0000 (12:34 +0100)]
temporarily ignore CdmLightExportTest s
Andreas Müller [Fri, 30 Oct 2020 09:47:58 +0000 (10:47 +0100)]
ref #6589 fix update script (incorrect alias) and update remote-webapp h2 test db
Katja Luther [Fri, 30 Oct 2020 09:47:09 +0000 (10:47 +0100)]
ref #9262: fix homotypical group name comparator
Katja Luther [Fri, 30 Oct 2020 09:44:56 +0000 (10:44 +0100)]
ref #8774: save plural of representation was missing
Andreas Müller [Fri, 30 Oct 2020 09:39:41 +0000 (10:39 +0100)]
ref #8802 fix jaxb annotations for ExtendedTimePeriod
Andreas Müller [Fri, 30 Oct 2020 09:06:31 +0000 (10:06 +0100)]
ref #9263 use lower case for SpecimenTypeDesignationStatus
Andreas Müller [Thu, 29 Oct 2020 14:52:41 +0000 (15:52 +0100)]
ref #6589 finalize update script for
Andreas Müller [Thu, 29 Oct 2020 14:37:08 +0000 (15:37 +0100)]
framework for SchemaUpdate to 5.18.4
Katja Luther [Thu, 29 Oct 2020 22:13:13 +0000 (23:13 +0100)]
ref #9262: add homotypic group strings
Katja Luther [Thu, 29 Oct 2020 15:52:53 +0000 (16:52 +0100)]
ref #8774: further implementations for using term dtos in editor
Andreas Müller [Thu, 29 Oct 2020 14:06:49 +0000 (15:06 +0100)]
ref #8802 add TemporalData to jaxb annotation in DescriptionBase
Andreas Müller [Thu, 29 Oct 2020 14:04:41 +0000 (15:04 +0100)]
cleanup
Katja Luther [Wed, 28 Oct 2020 11:14:50 +0000 (12:14 +0100)]
ref #69554: additional homotypic group strings
Katja Luther [Tue, 27 Oct 2020 12:09:23 +0000 (13:09 +0100)]
ref #69554: fix test
Katja Luther [Tue, 27 Oct 2020 10:58:48 +0000 (11:58 +0100)]
ref #69554: adapt cdmLight export
Andreas Müller [Fri, 23 Oct 2020 21:00:27 +0000 (23:00 +0200)]
ref #9262 further cleanup citation handling in TypeDesignationSetManager (cont.)
Andreas Müller [Fri, 23 Oct 2020 20:55:56 +0000 (22:55 +0200)]
cleanup
Andreas Müller [Fri, 23 Oct 2020 20:55:34 +0000 (22:55 +0200)]
ref #9262 further cleanup citation handling in TypeDesignationSetManager
Andreas Müller [Fri, 23 Oct 2020 20:53:59 +0000 (22:53 +0200)]
cleanup TypeDesignationSetManager
Andreas Müller [Fri, 23 Oct 2020 20:45:02 +0000 (22:45 +0200)]
ref #9262 fix failing test by adding lectotype to name type status in test terms
Andreas Müller [Fri, 23 Oct 2020 18:48:46 +0000 (20:48 +0200)]
ref #9262 unify buildString methods in TypeDesignationSetManager and unify some minor formatting issues
Andreas Müller [Fri, 23 Oct 2020 17:48:21 +0000 (19:48 +0200)]
remove deprecated method from TypeDesignationSetManager
Andreas Müller [Fri, 23 Oct 2020 15:43:22 +0000 (17:43 +0200)]
ref #9262 javadoc link to ticket
Andreas Müller [Fri, 23 Oct 2020 15:39:21 +0000 (17:39 +0200)]
correct rank for name type tests in TypeDesignationSetManagerTest
Andreas Müller [Fri, 23 Oct 2020 15:37:30 +0000 (17:37 +0200)]
ref #9262 add test for lecto-nametype with designated by and fide
Andreas Müller [Fri, 23 Oct 2020 13:22:00 +0000 (15:22 +0200)]
ref #9262 move lectotype citation for name types in stringify(NameTypeDesignation) method
Andreas Müller [Fri, 23 Oct 2020 13:19:39 +0000 (15:19 +0200)]
cleanup
Andreas Müller [Fri, 23 Oct 2020 09:55:24 +0000 (11:55 +0200)]
ref #9262 move designated by out of brackets
Andreas Müller [Fri, 23 Oct 2020 09:53:56 +0000 (11:53 +0200)]
cleanup
Andreas Müller [Thu, 22 Oct 2020 17:14:04 +0000 (19:14 +0200)]
ref #9262 fix et. al position in cdmlight
Andreas Müller [Thu, 22 Oct 2020 16:51:51 +0000 (18:51 +0200)]
fix linux compilation issue
Andreas Müller [Thu, 22 Oct 2020 16:46:56 +0000 (18:46 +0200)]
improve javadoc link
Andreas Müller [Thu, 22 Oct 2020 16:42:23 +0000 (18:42 +0200)]
ref #9262 fix fide and designated by handling for cdmlight export and TypeDesignationSetManager
Andreas Müller [Thu, 22 Oct 2020 16:28:27 +0000 (18:28 +0200)]
cleanup
Andreas Kohlbecker [Thu, 22 Oct 2020 16:08:44 +0000 (18:08 +0200)]
updating maven-antrun-plugin configuration to conform to version 3.0.0 - final bug fix
Andreas Kohlbecker [Thu, 22 Oct 2020 14:57:11 +0000 (16:57 +0200)]
updating maven-antrun-plugin configuration to conform to version 3.0.0 - bug fix
Andreas Kohlbecker [Thu, 22 Oct 2020 14:31:07 +0000 (16:31 +0200)]
updating maven-antrun-plugin configuration to conform to version 3.0.0 - bug fix
Andreas Kohlbecker [Thu, 22 Oct 2020 14:23:52 +0000 (16:23 +0200)]
updating maven-antrun-plugin configuration to conform to version 3.0.0 - bug fix
Andreas Kohlbecker [Thu, 22 Oct 2020 14:11:05 +0000 (16:11 +0200)]
ref #9252 adding MediaSpecimen.media to DerivedUnitDTO.listOfMedia
Andreas Kohlbecker [Thu, 22 Oct 2020 14:07:03 +0000 (16:07 +0200)]
fixing compilation problem stemming from outdated javadoc @link references
Andreas Kohlbecker [Thu, 22 Oct 2020 14:05:42 +0000 (16:05 +0200)]
updating maven-antrun-plugin configuration to conform to version 3.0.0
Andreas Müller [Thu, 22 Oct 2020 12:31:55 +0000 (14:31 +0200)]
cleanup
Andreas Müller [Thu, 22 Oct 2020 11:40:30 +0000 (13:40 +0200)]
improve generics for TypeDesignationSetManager TypedEntityReference
Andreas Müller [Thu, 22 Oct 2020 11:39:43 +0000 (13:39 +0200)]
cleanup
Andreas Kohlbecker [Thu, 22 Oct 2020 10:14:24 +0000 (12:14 +0200)]
fix #9261 extending init strategy to avoid LIEs in TaxonController
Andreas Müller [Tue, 20 Oct 2020 16:24:08 +0000 (18:24 +0200)]
remove redmine-java-api version from parent pom
Andreas Müller [Tue, 20 Oct 2020 16:20:05 +0000 (18:20 +0200)]
remove 2 deprecated methods from ImagesUtility
Andreas Müller [Tue, 20 Oct 2020 16:19:36 +0000 (18:19 +0200)]
cleanup
Andreas Kohlbecker [Tue, 20 Oct 2020 11:08:31 +0000 (13:08 +0200)]
ref #7936 removing redmine-api dependency and unused ExternalServiceException
Andreas Kohlbecker [Tue, 20 Oct 2020 10:49:47 +0000 (12:49 +0200)]
ref #7936 full removal of redmine communication hub code
Andreas Müller [Tue, 20 Oct 2020 09:37:24 +0000 (11:37 +0200)]
archive old schema updaters (combine packages)
Andreas Kohlbecker [Mon, 19 Oct 2020 19:56:45 +0000 (21:56 +0200)]
ref #9252 adding mostSignificantIdentifier to DerivedUnitDTO
Andreas Kohlbecker [Mon, 19 Oct 2020 19:41:20 +0000 (21:41 +0200)]
ref #9252 using TypedEntityReference for DerivedUnitDTO.associatedTaxa
Andreas Müller [Mon, 19 Oct 2020 14:28:54 +0000 (16:28 +0200)]
try to remove direct dependencies (junit and log4j) from cdmlib-parent (cont.)
Andreas Müller [Mon, 19 Oct 2020 14:20:28 +0000 (16:20 +0200)]
ref #9204 update junit to 4.13.1 in cdmlib
Andreas Kohlbecker [Mon, 19 Oct 2020 14:08:15 +0000 (16:08 +0200)]
ref #9252 adding id as propery to recover lost UuidAndTitleCache property for the taxeditor
Andreas Müller [Mon, 19 Oct 2020 14:06:30 +0000 (16:06 +0200)]
try to remove direct dependencies (junit and log4j) from cdmlib-parent
Andreas Kohlbecker [Mon, 19 Oct 2020 12:09:56 +0000 (14:09 +0200)]
ref #9252 maving fieldUnitDTO creation into transactional context - fixing careless mistake
Andreas Kohlbecker [Mon, 19 Oct 2020 12:03:58 +0000 (14:03 +0200)]
ref #9252 maving fieldUnitDTO creation into transactional context
Andreas Müller [Mon, 19 Oct 2020 11:55:20 +0000 (13:55 +0200)]
try to fix failing (in suite) test (cont.)
Andreas Müller [Mon, 19 Oct 2020 11:49:33 +0000 (13:49 +0200)]
try to fix failing (in suite) test (cont.)
Andreas Müller [Mon, 19 Oct 2020 11:49:12 +0000 (13:49 +0200)]
cleanup
Andreas Müller [Mon, 19 Oct 2020 11:33:45 +0000 (13:33 +0200)]
try to fix failing (in suite) test
Andreas Müller [Mon, 19 Oct 2020 11:33:20 +0000 (13:33 +0200)]
remove some further null values from test data
Andreas Müller [Mon, 19 Oct 2020 11:32:34 +0000 (13:32 +0200)]
cleanup
Andreas Müller [Mon, 19 Oct 2020 11:15:38 +0000 (13:15 +0200)]
cleanup
Andreas Müller [Mon, 19 Oct 2020 11:13:27 +0000 (13:13 +0200)]
remove some null values from test data
Andreas Kohlbecker [Mon, 19 Oct 2020 07:55:22 +0000 (09:55 +0200)]
fix #9259 reducing fields in TermBase json serializations
Andreas Kohlbecker [Mon, 19 Oct 2020 06:27:31 +0000 (08:27 +0200)]
ref #9252 using DefinedTermBase for term fields in DTOs and TypedEdityRefernce for indentifications
Andreas Kohlbecker [Fri, 16 Oct 2020 16:01:40 +0000 (18:01 +0200)]
ref #9252 localizing kind of unit in SpecimenOrObservationBaseDTO
Andreas Kohlbecker [Fri, 16 Oct 2020 11:50:09 +0000 (13:50 +0200)]
fix #9258 using Partial for date field in FieldUnitDTO
Andreas Kohlbecker [Fri, 16 Oct 2020 10:04:31 +0000 (12:04 +0200)]
ref #8419 ref #9252 introducing specimenIdentifier field in DTO and experimental accessionNumber cleanup
Andreas Kohlbecker [Fri, 16 Oct 2020 06:58:18 +0000 (08:58 +0200)]
ref #8423 OccurrenceServiceImpl.findFieldUnitDTO() : fixing merge problem of derivate paths
Andreas Kohlbecker [Thu, 15 Oct 2020 19:34:27 +0000 (21:34 +0200)]
ref #9253 cleaning up caller of OccurrenceServiceImpl.findFieldUnitDTO(..)
Andreas Kohlbecker [Thu, 15 Oct 2020 19:26:34 +0000 (21:26 +0200)]
ref #8423 raising log level of problematic situation and code cleaning
Andreas Kohlbecker [Thu, 15 Oct 2020 15:40:04 +0000 (17:40 +0200)]
ref #8423 ref #9253, ref #9252 fixing duplicate addition of DerivedUnitDTOs
Andreas Kohlbecker [Thu, 15 Oct 2020 15:28:09 +0000 (17:28 +0200)]
ref #9252 basing SpecimenOrObservationBaseDTO on TypedEntityReference
Andreas Kohlbecker [Thu, 15 Oct 2020 13:35:02 +0000 (15:35 +0200)]
ref #9252 determinig hasTypes from actual data and fixing type probelms in methods
Andreas Kohlbecker [Thu, 15 Oct 2020 10:46:14 +0000 (12:46 +0200)]
ref #9257 comments including questions on missing filtering in the DrivedUnitDTO construction
Andreas Kohlbecker [Thu, 15 Oct 2020 10:26:12 +0000 (12:26 +0200)]
ref #9252 ref #9257 exposing SpecimenOrObservationType filter to factory method and better flag handling
Katja Luther [Thu, 15 Oct 2020 09:59:31 +0000 (11:59 +0200)]
ref #9256: fix bug in nametypedesignation string
Andreas Kohlbecker [Thu, 15 Oct 2020 09:40:17 +0000 (11:40 +0200)]
fix #9254 removing restriction to DerivedUnit in conmroller method
Andreas Kohlbecker [Thu, 15 Oct 2020 09:25:35 +0000 (11:25 +0200)]
ref #9253 todo comment
Andreas Kohlbecker [Thu, 15 Oct 2020 06:52:47 +0000 (08:52 +0200)]
ref #9252 adapting service method no new DTO name
Andreas Kohlbecker [Wed, 14 Oct 2020 12:46:09 +0000 (14:46 +0200)]
ref #9252 harmonizing SpecimenOrOberservationBase related DTOs - renaming classes
Andreas Kohlbecker [Wed, 14 Oct 2020 12:14:09 +0000 (14:14 +0200)]
ref #9252 harmonizing SpecimenOrOberservationBase related DTOs
Andreas Kohlbecker [Wed, 14 Oct 2020 12:04:48 +0000 (14:04 +0200)]
ref #9252 harmonizing SpecimenOrOberservationBase related DTOs
Andreas Kohlbecker [Tue, 13 Oct 2020 15:56:01 +0000 (17:56 +0200)]
ref #9249 ref #3978 harmonization of FieldUnit and Derivate DTOs:
- using pointDTO in all webservices
- cleaning up FieldUnitDTO and DerivateDTO
- using CollectionDTO on DerivateDTO
Katja Luther [Tue, 13 Oct 2020 12:16:01 +0000 (14:16 +0200)]
ref #8774: smaller changes in termDtos
Andreas Kohlbecker [Tue, 13 Oct 2020 10:32:50 +0000 (12:32 +0200)]
TypedEntityReference reducing factory methods to one
Andreas Kohlbecker [Tue, 13 Oct 2020 10:23:44 +0000 (12:23 +0200)]
ref #3978 PointBeanProcessor: sexagesimalstring without geospacial reference system
Katja Luther [Mon, 12 Oct 2020 13:18:16 +0000 (15:18 +0200)]
fix test - last commit
Katja Luther [Mon, 12 Oct 2020 13:02:13 +0000 (15:02 +0200)]
fix test - last commit
Katja Luther [Mon, 12 Oct 2020 12:40:41 +0000 (14:40 +0200)]
revert change in TermNode
Katja Luther [Mon, 12 Oct 2020 12:37:58 +0000 (14:37 +0200)]
fix test -continue
Katja Luther [Mon, 12 Oct 2020 12:21:32 +0000 (14:21 +0200)]
fix test -continue
Katja Luther [Mon, 12 Oct 2020 12:05:38 +0000 (14:05 +0200)]
fix test -continue
Katja Luther [Mon, 12 Oct 2020 11:46:48 +0000 (13:46 +0200)]
fix test -continue
Katja Luther [Mon, 12 Oct 2020 11:30:43 +0000 (13:30 +0200)]
fix test
Katja Luther [Mon, 12 Oct 2020 11:16:51 +0000 (13:16 +0200)]
fix test