jenkins [Thu, 6 Jul 2017 14:41:13 +0000 (16:41 +0200)]
Merge branch 'master' into develop
jenkins [Thu, 6 Jul 2017 14:41:12 +0000 (16:41 +0200)]
updating develop poms to master versions to avoid merge conflicts
jenkins [Thu, 6 Jul 2017 14:41:09 +0000 (16:41 +0200)]
Merge branch 'release/4.8.0'
jenkins [Thu, 6 Jul 2017 14:24:47 +0000 (16:24 +0200)]
updating poms for branch'release/4.8.0' with non-snapshot versions
Andreas Kohlbecker [Thu, 6 Jul 2017 12:33:44 +0000 (14:33 +0200)]
ubating hibernate version in comment
jenkins [Thu, 6 Jul 2017 10:41:38 +0000 (12:41 +0200)]
updating poms for 4.9.0-SNAPSHOT development
Katja Luther [Wed, 5 Jul 2017 14:27:33 +0000 (16:27 +0200)]
export all specimenOrObservationBase not only derivedUnits
Katja Luther [Wed, 5 Jul 2017 08:54:23 +0000 (10:54 +0200)]
add check for NP in cdm light export
Katja Luther [Wed, 5 Jul 2017 08:27:02 +0000 (10:27 +0200)]
ref #6627: avoid NPE when children list contains null values
Andreas Müller [Wed, 5 Jul 2017 00:00:11 +0000 (02:00 +0200)]
fix clearCache handling and more progressMonitor subtasks
Andreas Kohlbecker [Thu, 6 Jul 2017 12:33:44 +0000 (14:33 +0200)]
ubating hibernate version in comment
jenkins [Thu, 6 Jul 2017 10:41:38 +0000 (12:41 +0200)]
updating poms for 4.9.0-SNAPSHOT development
Katja Luther [Wed, 5 Jul 2017 14:27:33 +0000 (16:27 +0200)]
export all specimenOrObservationBase not only derivedUnits
Katja Luther [Wed, 5 Jul 2017 08:54:23 +0000 (10:54 +0200)]
add check for NP in cdm light export
Katja Luther [Wed, 5 Jul 2017 08:27:02 +0000 (10:27 +0200)]
ref #6627: avoid NPE when children list contains null values
Patrick Plitzner [Wed, 5 Jul 2017 08:10:36 +0000 (10:10 +0200)]
ref #6774 Export results to byte array stream
Andreas Müller [Wed, 5 Jul 2017 00:00:11 +0000 (02:00 +0200)]
fix clearCache handling and more progressMonitor subtasks
Katja Luther [Tue, 4 Jul 2017 09:54:01 +0000 (11:54 +0200)]
minor
Patrick Plitzner [Tue, 4 Jul 2017 11:33:30 +0000 (13:33 +0200)]
ref #6774 use feature uuid in RDF
Andreas Müller [Mon, 3 Jul 2017 15:12:47 +0000 (17:12 +0200)]
cleanup
Katja Luther [Mon, 3 Jul 2017 13:23:48 +0000 (15:23 +0200)]
move taxonNodeFiler to model
Katja Luther [Tue, 4 Jul 2017 09:54:01 +0000 (11:54 +0200)]
minor
Andreas Müller [Mon, 3 Jul 2017 15:12:47 +0000 (17:12 +0200)]
cleanup
Patrick Plitzner [Mon, 3 Jul 2017 15:02:43 +0000 (17:02 +0200)]
ref ##6774 Initial import of OWL export
Katja Luther [Mon, 3 Jul 2017 13:23:48 +0000 (15:23 +0200)]
move taxonNodeFiler to model
Katja Luther [Mon, 3 Jul 2017 09:44:30 +0000 (11:44 +0200)]
TaxonNodeFilter needs to implement serializable
Andreas Müller [Mon, 3 Jul 2017 09:35:44 +0000 (11:35 +0200)]
ref #6754 ref #6755 fix bug with duplicate TaxonNode fetch
Andreas Müller [Sun, 2 Jul 2017 10:50:24 +0000 (12:50 +0200)]
ref #6754 ref #6755 implement partitioner for DwcA Export retrieval
Andreas Müller [Sun, 2 Jul 2017 10:49:42 +0000 (12:49 +0200)]
ref #6754 ref #6755 use IDs for candidate retrieval
Andreas Müller [Sun, 2 Jul 2017 10:47:56 +0000 (12:47 +0200)]
cleanup
Andreas Müller [Sun, 2 Jul 2017 10:47:07 +0000 (12:47 +0200)]
fix generics compile error
Andreas Müller [Sat, 1 Jul 2017 21:13:25 +0000 (23:13 +0200)]
ref #6754 ref #6755 improve filtering and progress monitoring for DwCA export
Andreas Müller [Sat, 1 Jul 2017 21:09:22 +0000 (23:09 +0200)]
cleanup and adapt export hierarchie (add destination generics)
Andreas Müller [Sat, 1 Jul 2017 09:16:32 +0000 (11:16 +0200)]
fix possible NPE in CDM light export for missing names
Andreas Müller [Fri, 30 Jun 2017 14:08:24 +0000 (16:08 +0200)]
ref #6754 ref #6755 add includeRootNodes and fix count
Andreas Müller [Fri, 30 Jun 2017 13:17:25 +0000 (15:17 +0200)]
ref #6754 ref #6755 combine TaxonNodeFilter with DwcA export
Andreas Müller [Fri, 30 Jun 2017 12:10:20 +0000 (14:10 +0200)]
ref #6754 fix taxon node filter tests
Andreas Müller [Fri, 30 Jun 2017 11:57:55 +0000 (13:57 +0200)]
ref #6754 improve taxon node filter
Andreas Müller [Fri, 30 Jun 2017 11:29:50 +0000 (13:29 +0200)]
ref #6754 fix name relationship bug and some cleanup
Andreas Müller [Fri, 30 Jun 2017 11:26:14 +0000 (13:26 +0200)]
ref #6754 repair zip creation for large datasets
Andreas Müller [Fri, 30 Jun 2017 06:56:19 +0000 (08:56 +0200)]
ref #6754 cleanup reporting
Patrick Plitzner [Fri, 30 Jun 2017 11:42:46 +0000 (13:42 +0200)]
Fix exception message
Andreas Kohlbecker [Fri, 30 Jun 2017 10:59:10 +0000 (12:59 +0200)]
ref #6687 fixing bug in ConversationHolder object comparison by == operator and better logging
Andreas Müller [Fri, 30 Jun 2017 01:25:10 +0000 (03:25 +0200)]
ref #6755 ref #6754 add result to DwCA file result
Andreas Müller [Thu, 29 Jun 2017 23:16:21 +0000 (01:16 +0200)]
ref #6755 ref #6754 improve DwcA zip export
Katja Luther [Thu, 29 Jun 2017 10:22:23 +0000 (12:22 +0200)]
cdmLight with comma delimiter
Andreas Müller [Thu, 29 Jun 2017 10:02:25 +0000 (12:02 +0200)]
ref #6755 fix LIE for filename creation for DwCA web service export
Andreas Müller [Thu, 29 Jun 2017 09:46:00 +0000 (11:46 +0200)]
ref #6755 fix encoding for DwCA web service export
Andreas Müller [Thu, 29 Jun 2017 07:34:53 +0000 (09:34 +0200)]
ref #6519 improve result handling by codeLocation extraction and adding dataLocation
Andreas Müller [Thu, 29 Jun 2017 07:33:23 +0000 (09:33 +0200)]
ref #6754 remove Component from single DwcA exports
Andreas Müller [Wed, 28 Jun 2017 20:42:23 +0000 (22:42 +0200)]
remove exportData from CdmExportBase
Andreas Müller [Wed, 28 Jun 2017 20:41:39 +0000 (22:41 +0200)]
remove exportData from CdmExportBase
Andreas Müller [Wed, 28 Jun 2017 20:06:37 +0000 (22:06 +0200)]
ref #6755 first preliminary version of DwC-A export web service
Andreas Müller [Wed, 28 Jun 2017 20:00:23 +0000 (22:00 +0200)]
cleanup
Katja Luther [Wed, 28 Jun 2017 07:45:12 +0000 (09:45 +0200)]
minor
Katja Luther [Wed, 28 Jun 2017 07:26:34 +0000 (09:26 +0200)]
minor
Andreas Müller [Tue, 27 Jun 2017 20:25:24 +0000 (22:25 +0200)]
ref #6754 improve handling of existing records in DwC-A export
Katja Luther [Tue, 27 Jun 2017 12:00:58 +0000 (14:00 +0200)]
minor
Andreas Müller [Tue, 27 Jun 2017 11:47:38 +0000 (13:47 +0200)]
ref #6754 further adapt DwC-A export
Katja Luther [Tue, 27 Jun 2017 09:48:22 +0000 (11:48 +0200)]
adapt excel import to the plant list files
Katja Luther [Tue, 27 Jun 2017 07:38:56 +0000 (09:38 +0200)]
minor in excel import
Andreas Müller [Mon, 26 Jun 2017 22:06:41 +0000 (00:06 +0200)]
ref #6627 improve export result handling for cdm light
Andreas Müller [Mon, 26 Jun 2017 22:01:29 +0000 (00:01 +0200)]
cleanup
Andreas Müller [Mon, 26 Jun 2017 21:56:46 +0000 (23:56 +0200)]
preliminary ignore IPNI Test
Andreas Müller [Mon, 26 Jun 2017 21:55:06 +0000 (23:55 +0200)]
cleanup tests in io and service
Andreas Müller [Mon, 26 Jun 2017 21:26:16 +0000 (23:26 +0200)]
fix failing tests
Andreas Müller [Mon, 26 Jun 2017 21:22:58 +0000 (23:22 +0200)]
ref #6541 ref #6698 fix bug ImportResult is not set correctly
Andreas Müller [Mon, 26 Jun 2017 21:08:05 +0000 (23:08 +0200)]
cleanup
Katja Luther [Mon, 26 Jun 2017 14:09:39 +0000 (16:09 +0200)]
adapt excel import to the plant list csv file
Andreas Müller [Mon, 26 Jun 2017 08:45:32 +0000 (10:45 +0200)]
ref #6754 adapt signature
Andreas Müller [Mon, 26 Jun 2017 08:44:03 +0000 (10:44 +0200)]
ref #6627 adapt handling of state in OutputModelResultProcessor
Andreas Müller [Mon, 26 Jun 2017 08:34:17 +0000 (10:34 +0200)]
evaluate doSynonyms for taxon node children retrieval
Andreas Müller [Mon, 26 Jun 2017 08:33:21 +0000 (10:33 +0200)]
ref #6627 adapt handling of state in OutputModelResultProcessor
Andreas Müller [Mon, 26 Jun 2017 08:32:18 +0000 (10:32 +0200)]
ref #6754 first part of refactoring DwcA export, also improved ExportResult / ImportResult handling ref #6626 ref #6698
Andreas Müller [Sun, 25 Jun 2017 23:06:48 +0000 (01:06 +0200)]
cleanup
Andreas Müller [Sun, 25 Jun 2017 08:16:57 +0000 (10:16 +0200)]
ref 6519 add new error signature to ExportResult
Andreas Müller [Sun, 25 Jun 2017 08:15:03 +0000 (10:15 +0200)]
ref #6627 adapt error handling for cdm ligth export
Andreas Müller [Sun, 25 Jun 2017 08:13:57 +0000 (10:13 +0200)]
cleanup
Katja Luther [Sat, 24 Jun 2017 07:42:39 +0000 (09:42 +0200)]
minor
Katja Luther [Fri, 23 Jun 2017 11:57:57 +0000 (13:57 +0200)]
reorganize publication date output in cdm light export
Katja Luther [Fri, 23 Jun 2017 11:30:32 +0000 (13:30 +0200)]
reorganize publication date output in cdm light export
Andreas Kohlbecker [Fri, 23 Jun 2017 10:21:34 +0000 (12:21 +0200)]
upgrading the maven-bundle-plugin to 3.3.0
Andreas Kohlbecker [Fri, 23 Jun 2017 09:09:35 +0000 (11:09 +0200)]
fix #6750 implementing DerivedUnitConverter with test
Katja Luther [Thu, 22 Jun 2017 11:53:10 +0000 (13:53 +0200)]
remove identifier from name table
Katja Luther [Thu, 22 Jun 2017 11:52:02 +0000 (13:52 +0200)]
add identifier table
Patrick Plitzner [Wed, 21 Jun 2017 07:57:30 +0000 (09:57 +0200)]
ref #6694 Add service method to add child features
- also add parent of deleted feature node to DeleteResult
Patrick Plitzner [Tue, 20 Jun 2017 16:31:39 +0000 (18:31 +0200)]
ref #6694 Fix moving of feature nodes
Patrick Plitzner [Tue, 20 Jun 2017 14:43:12 +0000 (16:43 +0200)]
ref #6694 Add service method to move FeatureNodes
Katja Luther [Tue, 20 Jun 2017 12:02:15 +0000 (14:02 +0200)]
ref #6730: fix delete of media
Katja Luther [Tue, 20 Jun 2017 07:15:08 +0000 (09:15 +0200)]
cdmLight export configurator: configure whether result is a zip file or not
Katja Luther [Mon, 19 Jun 2017 13:24:01 +0000 (15:24 +0200)]
smaller changes in specimen import
Katja Luther [Mon, 19 Jun 2017 13:23:20 +0000 (15:23 +0200)]
smaller changes in specimen import and excel import
Katja Luther [Mon, 19 Jun 2017 12:41:57 +0000 (14:41 +0200)]
outputmodel -> cdmLight
Katja Luther [Mon, 19 Jun 2017 12:06:45 +0000 (14:06 +0200)]
rename outputModel to cdmLight
Katja Luther [Mon, 19 Jun 2017 10:14:23 +0000 (12:14 +0200)]
cdm light: add collation
Katja Luther [Mon, 19 Jun 2017 08:04:04 +0000 (10:04 +0200)]
csv light export: smaller changes in scientificName: year published and volume for booksections
Katja Luther [Mon, 19 Jun 2017 07:49:42 +0000 (09:49 +0200)]
csv light export: smaller changes in specimen.locality and reference.shortCitation
Katja Luther [Thu, 15 Jun 2017 12:00:45 +0000 (14:00 +0200)]
ref #6730: minor
Katja Luther [Thu, 15 Jun 2017 11:51:42 +0000 (13:51 +0200)]
ref #6730: first quick fix, to avoid deleting media referenced somewhere else.
Andreas Müller [Fri, 16 Jun 2017 10:40:10 +0000 (12:40 +0200)]
ref #6627 add error handling to CDM light export (II)