merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk
authorAndreas Kohlbecker <a.kohlbecker@bgbm.org>
Wed, 16 Jun 2010 15:30:55 +0000 (15:30 +0000)
committerAndreas Kohlbecker <a.kohlbecker@bgbm.org>
Wed, 16 Jun 2010 15:30:55 +0000 (15:30 +0000)
commit892efc6951acfa51b009e26798a12033d2a6335b
tree5ac3b40b26e16cd52fb7dc8b00e7ff9ee67de043
parente0a7671f3f981454025f334cca2a53f6af999d18
merging /branches/cdmlib/SPRINT-Chichorieae1/ to trunk
595 files changed:
.gitattributes
.gitignore
app-import/pom.xml
app-import/src/main/java/eu/etaxonomy/cdm/app/abcdImport/SynthesysCacheActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/AlgaTerraActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/SalvadorActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/TreeCreator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/common/CdmDestinations.java
app-import/src/main/java/eu/etaxonomy/cdm/app/common/CdmImportSources.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/eflora/EfloraSources.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/eflora/SapindaceaeActivator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/excelImport/taxa/NormalExplicitActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/globis/GlobisActivator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/images/ImageImportConfigurator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/ErmsActivator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/EuroMedActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/FaunaEuropaeaActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/FaunaEuropaeaSources.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/PesiDestinations.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/PesiExportActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/merging/FaunaEuErmsFindIdenticalNamesActivator.java [moved from app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/merging/FaunaEuErmsMergingActivator.java with 80% similarity]
app-import/src/main/java/eu/etaxonomy/cdm/app/pesi/merging/FaunaEuErmsMergeActivator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/synthesysImport/SynthesysCacheActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/tcs/TcsSources.java
app-import/src/main/java/eu/etaxonomy/cdm/app/util/TestDatabase.java
app-import/src/main/java/eu/etaxonomy/cdm/app/viennaImport/ViennaActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/cichorieae/CichorieaeActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/cichorieae/CichorieaeImageActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/cichorieae/TaraxacumActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/diptera/DipteraActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/diptera/DipteraCollectionImport.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/diptera/DipteraDistributionParser.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/diptera/DipteraPostImportUpdater.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/palmae/PalmaeImageActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/palmae/PalmaeProtologueImportActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/wp6/palmae/config/PalmaeProtologueImportConfigurator.java
app-import/src/main/java/eu/etaxonomy/cdm/io/CichorieaeImageImport.java
app-import/src/main/java/eu/etaxonomy/cdm/io/PalmaeImageImport.java
app-import/src/main/java/eu/etaxonomy/cdm/io/PalmaeProtologueImport.java
app-import/src/main/java/eu/etaxonomy/cdm/io/ProtologueImport.java
app-import/src/main/java/eu/etaxonomy/cdm/io/eflora/sapindaceae/SapindaceaeImportBase.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/eflora/sapindaceae/SapindaceaeImportConfigurator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/eflora/sapindaceae/SapindaceaeImportState.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/eflora/sapindaceae/SapindaceaeTaxonImport.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisImportBase.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisImportConfigurator.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisImportState.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisReferenceImport.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisTransformer.java [new file with mode: 0644]
app-import/src/main/java/eu/etaxonomy/cdm/io/globis/validation/GlobisReferenceImportValidator.java [new file with mode: 0644]
app-import/src/main/resources/collections/Acronyms.tab [new file with mode: 0644]
app-import/src/main/resources/globis.rdf.xml
app-import/src/main/resources/globis_valid.rdf.xml [new file with mode: 0644]
cdm-server/LICENSE.TXT [new file with mode: 0644]
cdm-server/ide/eclipse/run cdm-server.jar in debugmode.launch [new file with mode: 0644]
cdm-server/ide/eclipse/run cdm-server.jar.launch [new file with mode: 0644]
cdm-server/pom.xml [new file with mode: 0644]
cdm-server/src/main/assembly/assembly.xml [new file with mode: 0644]
cdm-server/src/main/installer/lib/ant-deb-task-0.0.1.jar [moved from cdmlib-remote/src/main/installer/lib/ant-deb-task-0.0.1.jar with 100% similarity]
cdm-server/src/main/installer/linux/Makefile [moved from cdmlib-remote/src/main/installer/linux/Makefile with 100% similarity]
cdm-server/src/main/installer/linux/build-deb.xml [moved from cdmlib-remote/src/main/installer/linux/build-deb.xml with 89% similarity]
cdm-server/src/main/installer/linux/cdmserver [moved from cdmlib-remote/src/main/installer/templates/cdmserver with 94% similarity]
cdm-server/src/main/installer/linux/copyright [moved from cdmlib-remote/src/main/installer/linux/copyright with 100% similarity]
cdm-server/src/main/installer/linux/postinst [moved from cdmlib-remote/src/main/installer/linux/postinst with 85% similarity]
cdm-server/src/main/installer/linux/postrm [moved from cdmlib-remote/src/main/installer/linux/postrm with 84% similarity]
cdm-server/src/main/installer/templates/.cdmLibrary/datasources.xml [new file with mode: 0644]
cdm-server/src/main/installer/templates/copyright [moved from cdmlib-remote/src/main/installer/templates/copyright with 100% similarity]
cdm-server/src/main/installer/win32/Launch4JavaCDMSERVER.xml [moved from cdmlib-remote/src/main/installer/win32/Launch4JavaCDMSERVER.xml with 100% similarity]
cdm-server/src/main/installer/win32/cdmserver.nsi [moved from cdmlib-remote/src/main/installer/win32/cdmserver.nsi with 100% similarity]
cdm-server/src/main/installer/win32/cdmserver/bin/cdmserver.bat [moved from cdmlib-remote/src/main/installer/win32/cdmserver/bin/cdmserver.bat with 100% similarity]
cdm-server/src/main/java/eu/etaxonomy/cdm/server/Bootloader.java [new file with mode: 0644]
cdm-server/src/main/java/eu/etaxonomy/cdm/server/CommandOptions.java [new file with mode: 0644]
cdm-server/src/main/java/eu/etaxonomy/cdm/server/DataSourceProperties.java [new file with mode: 0644]
cdm-server/src/main/java/eu/etaxonomy/cdm/server/DataSourcePropertyParser.java [new file with mode: 0644]
cdm-server/src/main/resources/c3p0.properties [new file with mode: 0644]
cdm-server/src/main/resources/log4j.properties [new file with mode: 0644]
cdm-server/src/main/webapp/WEB-INF/web.xml [new file with mode: 0644]
cdm-server/src/main/webapp/css/server.css [moved from cdmlib-remote/src/main/webapp/server.css with 100% similarity]
cdm-server/src/main/webapp/css/style.css [moved from cdmlib-remote/src/main/webapp/style.css with 100% similarity]
cdm-server/src/main/webapp/favicon.ico [moved from cdmlib-remote/src/main/webapp/favicon.ico with 100% similarity]
cdm-server/src/main/webapp/index.html [moved from cdmlib-remote/src/main/webapp/index.html with 84% similarity]
cdm-server/src/main/webapp/index.jsp [new file with mode: 0644]
cdm-server/src/main/webapp/js/jquery.js [moved from cdmlib-remote/src/main/webapp/js/jquery.js with 100% similarity]
cdm-server/src/main/webapp/js/jquery.min.js [moved from cdmlib-remote/src/main/webapp/js/jquery.min.js with 100% similarity]
cdm-server/src/main/webapp/js/oai-pmh-status.js [new file with mode: 0644]
cdm-server/src/main/webapp/robots.txt [moved from cdmlib-remote/src/main/webapp/robots.txt with 100% similarity]
cdmlib-commons/pom.xml
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/CdmUtils.java
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/ExcelUtils.java
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/Tree.java [new file with mode: 0644]
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/TreeNode.java [new file with mode: 0644]
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/mediaMetaData/ImageMetaData.java
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/mediaMetaData/MediaMetaData.java
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/mediaMetaData/MetaDataFactory.java
cdmlib-commons/src/test/java/eu/etaxonomy/cdm/common/MediaMetaDataTest.java
cdmlib-ext/pom.xml
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/EditGeoServiceUtilities.java
cdmlib-io/pom.xml
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/BerlinModelTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelAuthorImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelAuthorTeamImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelCommonNamesImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelFactsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelNameFactsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelNameStatusImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelOccurrenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelOccurrenceSourceImport.java [new file with mode: 0644]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelRefDetailImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelReferenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonNameRelationImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonRelationImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTypesImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelWebMarkerImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/IPartitionedIO.java [deleted file]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/ResultSetPartitioner.java [deleted file]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelCommonNamesImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelOccurrenceImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelOccurrenceSourceImportValidator.java [new file with mode: 0644]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelRefDetailImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelReferenceImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelTaxonNameRelationImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/validation/BerlinModelTaxonRelationImportValidator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelTaxonomicTreeExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CdmImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/DbExportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ExportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportHelper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportStateBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/IoConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/PartitionerProfiler.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ResultSetPartitioner.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportMapping.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportNameTypeDesignationMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportSynonymMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportTaxIncludedInMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbSingleAttributeImportMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IDbImportTransformed.java [new file with mode: 0644]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IDbImportTransformer.java [new file with mode: 0644]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IXmlMapper.java [moved from cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/IXmlMapper.java with 88% similarity]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/MultipleAttributeMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/erms/ErmsImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/erms/ErmsSourceUsesImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/erms/ErmsTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/common/ExcelImportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/distribution/DistributionImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/CdmImportConfigurator.java [deleted file]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/CdmImportState.java [deleted file]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaAuthorImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaDistributionImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaRefImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaReference.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaReferenceTaxon.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaRelTaxonIncludeImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/faunaEuropaea/FaunaEuropaeaTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/CdmDocumentBuilder.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/CdmIDResolver.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/CdmResourceResolver.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/merging/FaunaEuErmsMerging.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiAdditionalTaxonSourceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiExportState.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiNoteExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiNoteSourceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiOccurrenceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiOccurrenceSourceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndNoteImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndnoteImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndnoteRecordsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/SDDDescriptionIO.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/SDDDocumentBuilder.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/SDDImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/AbcdIO.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/SpecimenImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/UnitsGatheringEvent.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/SpecimenImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/SynthesysIO.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/UnitsGatheringEvent.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/SimpleSpecimen.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXDescriptionImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXModsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXNomenclatureImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmOneToManyXmlMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmSingleAttributeXmlMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfReferenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonRelationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlPublicationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlSpecimensImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonRelationsImport.java
cdmlib-io/src/main/resources/log4j.properties
cdmlib-io/src/main/resources/schema/cdm/agent.xsd
cdmlib-io/src/main/resources/schema/cdm/cdm.xsd
cdmlib-io/src/main/resources/schema/cdm/common.xsd
cdmlib-io/src/main/resources/schema/cdm/description.xsd
cdmlib-io/src/main/resources/schema/cdm/name.xsd
cdmlib-io/src/main/resources/schema/cdm/occurrence.xsd
cdmlib-io/src/main/resources/schema/cdm/taxon.xsd
cdmlib-io/src/main/resources/schema/xml/XMLSchema.xsd
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/LanguageStringTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/SimpleMarshalTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/test/function/TestDatabase.java
cdmlib-io/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dataset.dtd
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/jaxb/CdmImporterTest.testImport-result.xml
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/jaxb/CdmImporterTest.xml
cdmlib-model/pom.xml
cdmlib-model/src/main/java/eu/etaxonomy/cdm/datagenerator/TaxonGenerator.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/AgentBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/Institution.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/Person.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/Team.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/TeamOrPersonBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/AnnotationType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmMetaData.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefaultTermInitializer.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DescriptionElementSource.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/ExtensionType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IdentifiableEntity.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IdentifiableSource.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/OrderedTermVocabulary.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/OriginalSourceBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/RelationshipBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/RelationshipTermBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/Representation.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/TermBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/TimePeriod.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/User.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/VocabularyEnum.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/init/ITermLoader.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/init/TermLoader.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/package-info.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/AbsenceTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/CommonTaxonName.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/DescriptionBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/DescriptionElementBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Feature.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/MediaKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/MultiAccessKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/NameFeature.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/PresenceAbsenceTermBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/PresenceTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Sex.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/SpecimenDescription.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/StatisticalMeasure.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonDescription.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TextData.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/NamedArea.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/NamedAreaLevel.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/NamedAreaType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/Point.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/ReferenceSystem.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/Media.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/MediaUtils.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/RightsTerm.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/HybridRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/HybridRelationshipType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NameRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NameTypeDesignationStatus.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NomenclaturalCode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NomenclaturalStatusType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NonViralName.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/Rank.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/SpecimenTypeDesignationStatus.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/TaxonNameBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/Collection.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DerivationEvent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DerivationEventType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DerivedUnitBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DeterminationEvent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/SpecimenOrObservationBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/INomenclaturalReference.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Thesis.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/AlternativeTreeRoot.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/ITreeNode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/SynonymRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/SynonymRelationshipType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/Taxon.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonComparator.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationshipType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonomicTree.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/StrategyBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/agent/InstitutionDefaultCacheStrategy.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/agent/PersonDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/agent/TeamDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/common/IdentifiableEntityDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/common/TermDefaultCacheStrategy.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/media/MediaDefaultCacheStrategy.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/name/BotanicNameDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/name/NonViralNameDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/occurrence/CollectionDefaultCacheStrategy.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ReferenceBaseDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/NonViralNameParserImpl.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/TaxonNameParserHistory.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/location/CoordinateConverter.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/annotation/ChildTaxaMustNotSkipRanks.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/constraint/ChildTaxaMustDeriveNameFromParentValidator.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/constraint/ChildTaxaMustNotSkipRanksValidator.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/constraint/NamesWithHomotypicRelationshipsMustBelongToSameGroupValidator.java
cdmlib-model/src/main/resources/ValidationMessages.properties
cdmlib-model/src/main/resources/terms/AbsenceTerm.csv
cdmlib-model/src/main/resources/terms/ExtensionType.csv
cdmlib-model/src/main/resources/terms/Feature.csv
cdmlib-model/src/main/resources/terms/NameFeature.csv
cdmlib-model/src/main/resources/terms/NaturalLanguageTerm.csv
cdmlib-model/src/main/resources/terms/PresenceTerm.csv
cdmlib-model/src/main/resources/terms/Rank.csv
cdmlib-model/src/main/resources/terms/ReferenceSystem.csv
cdmlib-model/src/main/resources/terms/TdwgArea.csv
cdmlib-model/src/main/resources/update/update_r2.1.2.2_r2.4.1.2.mysql.sql [new file with mode: 0644]
cdmlib-model/src/main/resources/update/update_term_r2.4.2.1-r2.4.2.2.mysql.sql [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/DatabaseInitialiser.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/agent/TeamTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/AnnotationTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/IdentifiableEntityTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/OrderedTermVocabularyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/init/TermLoaderTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/location/PointTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/media/MediaTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/NonViralNameTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/RankTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/reference/PublicationBaseTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonBaseTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonNodeTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonomicTreeTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/agent/PersonDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/agent/TeamDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/common/TermDefaultCacheStrategyTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/description/TaxonDescriptionDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/BotanicNameCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/NonViralNameDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/match/DefaultMatchStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/merge/DefaultMergeStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/parser/NonViralNameParserImplTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/parser/location/CoordinateConverterTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/test/function/TestModel.java
cdmlib-persistence/pom.xml
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/CdmPersistentDataSource.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/DataSourceBeanLoader.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/PersistentTermInitializer.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/UpdatableRoutingDataSource.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/types/MySQLDatabaseType.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/agent/IAgentDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/common/IOriginalSourceDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/description/IDescriptionDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/agent/AgentDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmGenericDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/MarkerDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/occurrence/OccurrenceDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/reference/ReferenceDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonomicTreeDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/name/ITaxonNameDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/occurrence/IOccurrenceDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/taxon/ITaxonDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/query/MatchMode.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/query/NativeSqlOrderHint.java [new file with mode: 0644]
cdmlib-persistence/src/main/resources/eu/etaxonomy/cdm/hibernate.cfg.xml
cdmlib-persistence/src/main/resources/eu/etaxonomy/cdm/persistence.xml
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/PersistentTermInitializerTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/datagenerator/TaxonGenerator.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmGenericDaoImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CacheStrategyGeneratorTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/test/function/TestPersistence.java
cdmlib-persistence/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet-with_auditing_info.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/BeanInitializerIntegration.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/DefinedTermDaoImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/TermVocabularyDaoImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/dataset.dtd
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImplTest.xml
cdmlib-remote/dist/cdmserver_1-1_all.deb [deleted file]
cdmlib-remote/ide/eclipse/cdmlib-remote - jetty run [debug].launch [deleted file]
cdmlib-remote/ide/eclipse/cdmserver - profile.launch [new file with mode: 0644]
cdmlib-remote/ide/eclipse/cdmserver - run.launch [new file with mode: 0644]
cdmlib-remote/pom.xml
cdmlib-remote/src/main/java/carbonfive/spring/web/pathparameter/ParameterizedUrlHandlerMapping.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/config/DataSourceConfig.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/AbstractOaiPmhController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/AgentController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/AgentListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/AnnotatableController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/BaseController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/BaseListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationListController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ExternalGeoController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ManagementController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/MediaController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/MediaListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/MediaPortalController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/NameController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/NameListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/NamePortalController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/OccurrenceController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/OccurrenceListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonNodeController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonNodeListController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonPortalController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonomicTreeController.java [deleted file]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonomicTreePortalController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonomicTreePortalListController.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TermListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/interceptor/DatasourceContextHandlerInterceptor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/oaipmh/TaxonOaiPmhController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/assembler/converter/HibernateProxyFieldMapper.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/assembler/converter/LsidConverter.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/assembler/converter/LsidProxyConverter.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/Error.java [moved from cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/OAIPMHerror.java with 86% similarity]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/ErrorCode.java [moved from cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/OAIPMHerrorcode.java with 89% similarity]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/MetadataPrefix.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/OAIPMH.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/OaiDc.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/ObjectFactory.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/ResumptionToken.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/IsoDateTimeEditor.java [new file with mode: 0644]
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cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/NamedAreaLevelPropertyEditor.java [new file with mode: 0644]
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cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/RankPropertyEditor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/SetSpecEditor.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/UUIDListPropertyEditor.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/UuidList.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/exception/CannotDisseminateFormatException.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/exception/NoRecordsMatchException.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/JsonConfigFactoryBean.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/AbstractCdmBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/CdmProxyBeanProcessorMatcher.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/HibernateJSONValueProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/MediaBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/ReferenceBaseBeanProcessor.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TaxonBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TaxonNameBaseBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TaxonNodeBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TaxonNodeDaoBeanProcessor.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TermBaseBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/TextDataBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/util/CardinalityPropertyFilter.java [new file with mode: 0644]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/JsonView.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/OaiPmhResponseView.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/oaipmh/ExceptionView.java [new file with mode: 0644]
cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote.xml
cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/oaipmh/mappings.xml
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cdmlib-remote/src/main/webapp/WEB-INF/views.xml
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cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/dto/assembler/lsid/AssemblerTest.java
cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/view/OaiPmhViewTest.java
cdmlib-remote/src/test/resources/log4j.properties
cdmlib-services/pom.xml
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationController.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationDefaultConfiguration.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/ICdmApplicationConfiguration.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/MethodNotSupportedByDerivedUnitTypeException.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/SpecimenFacade.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/SpecimenFacadeCacheStrategy.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/SpecimenFacadeNotSupportedException.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/AgentServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/DescriptionServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/FeatureTreeServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IAgentService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IAuditEventService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IDescriptionService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IMarkerService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IMediaService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/INameService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IOccurrenceService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonNodeService.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonTreeService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IdentificationKeyServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/MarkerServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/MediaServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/NameServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/NamedAreaNodeComparator.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/NamedAreaTree.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/OccurrenceServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeByNameComparator.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonNodeServiceImpl.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonTreeServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TermServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/ITaxonServiceConfigurator.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/impl/TaxonServiceConfiguratorImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/impl/AbstractPagerImpl.java
cdmlib-services/src/main/resources/eu/etaxonomy/cdm/defaultApplicationContext.xml
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/SpecimenFacadeCacheStrategyTest.java [new file with mode: 0644]
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/SpecimenFacadeTest.java [new file with mode: 0644]
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/MediaServiceImplTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TermServiceImplTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/scripts/FixMultipleTextDataInImageGalleries.java [new file with mode: 0644]
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/Datasource.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestAgentService.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestDatabase.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestService.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestTaxonFunction.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/CorrectEpithetsForRankTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/MustHaveAuthorityTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/NameValidCharactersTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/ReferenceValidationTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/TaxonNameCannotBeAcceptedAndSynonymTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/ValidationTest.java
cdmlib-services/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/TaxonServiceImplTest.xml
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eclipse-plugin/build.properties
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eclipse-plugin/src/test/java/eu/etaxonomy/cdm/aspectj/PropertyChangeTest.java
pom.xml