merge 3.0.2 to trunk
authorAndreas Müller <a.mueller@bgbm.org>
Wed, 1 Dec 2010 15:17:05 +0000 (15:17 +0000)
committerAndreas Müller <a.mueller@bgbm.org>
Wed, 1 Dec 2010 15:17:05 +0000 (15:17 +0000)
commit1d36aa543c3acc5c2d7cd81e35ddca50a70a4f11
treebc2bbb080c46973de76cdcf6930bdb7ae09333e4
parent91e33e815b5a303296d7c64b33722b365291b3c0
merge 3.0.2 to trunk
465 files changed:
.gitattributes
cdmlib-commons/pom.xml
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/CdmUtils.java
cdmlib-commons/src/main/java/eu/etaxonomy/cdm/common/DefaultProgressMonitor.java
cdmlib-ext/pom.xml
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciSchemaAdapter.java
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciServiceWrapper.java
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/dc/DublinCoreSchemaAdapter.java
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IIpniService.java
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IpniService.java
cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/sru/SruServiceWrapper.java
cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceTest.java
cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/sru/SruServiceWrapperTest.java
cdmlib-io/pom.xml
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/BerlinModelTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelCommonNamesImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelFactsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelNameFactsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelNameStatusImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelOccurrenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelOccurrenceSourceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelRefDetailImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelReferenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonNameRelationImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTaxonRelationImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelTypesImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelClassificationExport.java [moved from cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelTaxonomicTreeExport.java with 90% similarity]
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelExportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelFactExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelNameRelationExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/BerlinModelReferenceExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/mapper/FactCategoryMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/berlinModel/out/mapper/RefDetailMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CacheUpdater.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CacheUpdaterConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CdmApplicationAwareDefaultExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CdmApplicationAwareDefaultImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/CdmImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/DbExportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/DbImportStateBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ExportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/IImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportHelper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/ImportStateBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/IoConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportDefinedTermCreationMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportDescriptionElementCreationMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportDescriptionElementSourceCreationMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportImageGalleryMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportMediaMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportNameTypeDesignationMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportObjectCreationMapperBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportSynonymMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/DbImportTaxIncludedInMapper.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/common/ExcelImportConfiguratorBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/distribution/DistributionImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/CdmIDResolver.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/DataSet.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbExport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbExportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/JaxbImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pilotOutputHtml/PilotOutputDescriptionExporter.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/pilotOutputHtml/PilotOutputExporter.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndNoteImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndnoteImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/EndnoteRecordsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/reference/endnote/in/IEndnotePlaceholderClass.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/in/SDDImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/in/SDDImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDCdmExporter.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDDataSet.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDDocumentBuilder.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206Import.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206ImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenExcelImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenExcelImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXDescriptionImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportState.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXModsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXNomenclatureImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfReferenceImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonNameRelationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTaxonRelationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/TcsRdfTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/DefaultTcsXmlPlaceholders.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/ITcsXmlPlaceholderClass.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/TcsXmlTransformer.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlImportBase.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlImportConfigurator.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlMetaDataImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlPublicationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonNameImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonNameRelationsImport.java
cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlTaxonRelationsImport.java
cdmlib-io/src/main/resources/schema/cdm/cdm.xsd
cdmlib-io/src/main/resources/schema/cdm/taxon.xsd
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/CdmImporterTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/ReferenceTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/sdd/in/SDDImportTest.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/test/function/TestDatabase.java
cdmlib-io/src/test/java/eu/etaxonomy/cdm/test/integration/TestCdmDbComparator.java
cdmlib-io/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dataset.dtd
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/jaxb/CdmImporterTest.testImport-result.xml
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/jaxb/CdmImporterTest.xml
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/jaxb/ReferenceTest.xml
cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/SDDImportTest-input.xml [moved from cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/SDDDescriptionIOTest-input.xml with 100% similarity]
cdmlib-model/pom.xml
cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/PartialUserType.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/PartialUserType.java with 95% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/URIUserType.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/UUIDUserType.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/UUIDUserType.java with 95% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/WSDLDefinitionUserType.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/WSDLDefinitionUserType.java with 95% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/Person.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/agent/TeamOrPersonBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmMetaData.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefaultTermInitializer.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DescriptionElementSource.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/ExtensionType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IReferencedEntity.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/ISourceable.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IdentifiableEntity.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IdentifiableSource.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/LSIDAuthority.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/Language.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/MarkerType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/ReferencedEntityBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/RelationshipBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/VocabularyEnum.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/package-info.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/DescriptionBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/DescriptionElementBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/FeatureNode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/FeatureTree.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/IIdentificationKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/KeyStatement.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/MediaKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/MultiAccessKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/PolytomousKey.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/PolytomousKeyNode.java [new file with mode: 0644]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonDescription.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TaxonNameDescription.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/TextData.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/WorkingSet.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/AudioFile.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/ImageFile.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/Media.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/MediaRepresentation.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/MediaRepresentationPart.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/MovieFile.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/ReferencedMedia.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Sequence.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/HomotypicalGroup.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/HybridRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NameRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NameTypeDesignation.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NomenclaturalStatus.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/NonViralName.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/SpecimenTypeDesignation.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/TaxonNameBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/name/TypeDesignationBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DerivationEvent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DerivedUnitBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DeterminationEvent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/DeterminationModifier.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/FieldObservation.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/GatheringEvent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/Specimen.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/occurrence/SpecimenOrObservationBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Article.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Book.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/BookSection.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/CdDvd.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Database.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Generic.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IGeneric.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/INomenclaturalReference.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IPatent.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IPersonalCommunication.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IPublicationBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IReference.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IReferenceBase.java with 93% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ISectionBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IVolumeReference.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/IWebPage.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/InProceedings.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Journal.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Map.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Patent.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/PersonalCommunication.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/PrintSeries.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/PrintedUnitBase.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Proceedings.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/PublicationBase.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Reference.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceBase.java with 90% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceFactory.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceIdentity.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/ReferenceType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Report.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/SectionBase.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/Thesis.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/reference/WebPage.java [deleted file]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/AlternativeTreeRoot.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/Classification.java [moved from cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonomicTree.java with 82% similarity]
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/ITreeNode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/Synonym.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/SynonymRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/Taxon.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonComparator.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonNode.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationship.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationshipType.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/View.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/media/MediaDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/name/INameCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ArticleDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/BookDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/BookSectionDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/CdDvdDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/GenericDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/INomenclaturalReferenceCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/IReferenceBaseCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/JournalDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/NomRefDefaultCacheStrategyBase.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ReferenceBaseDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ThesisDefaultCacheStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/merge/DefaultMergeStrategy.java
cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/NonViralNameParserImpl.java
cdmlib-model/src/main/resources/ValidationMessages.properties
cdmlib-model/src/main/resources/terms/DeterminationModifier.csv
cdmlib-model/src/main/resources/terms/Language.csv
cdmlib-model/src/main/resources/terms/UndefinedLanguage.csv [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/datagenerator/TaxonGenerator.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/DatabaseInitialiser.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/DefaultTermInitializerTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/ExtensionTypeTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/LanguageTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/MarkerTypeTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/description/PolytomousKeyTest.java [new file with mode: 0644]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/description/TextDataTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/media/MediaTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/BotanicalNameTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/NonViralNameTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/TaxonNameBaseTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/reference/PublicationBaseTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/ClassificationTest.java [moved from cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonomicTreeTest.java with 73% similarity]
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonBaseTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonComparatorTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonNodeTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/taxon/TaxonTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/description/TaxonDescriptionDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/media/MediaDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/BotanicNameCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/NonViralNameDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/reference/ArticleDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/reference/CdDvdDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/taxon/TaxonBaseDefaultCacheStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/match/DefaultMatchStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/merge/DefaultMergeStrategyTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/parser/NonViralNameParserImplTest.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/test/function/TestModel.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/test/function/TestSpecimen.java
cdmlib-model/src/test/java/eu/etaxonomy/cdm/test/function/strategy/TestBookDefaultCacheStrategies.java
cdmlib-persistence/pom.xml
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/PersistentTermInitializer.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/CdmUpdater.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ColumnAdder.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ColumnNameChanger.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ColumnRemover.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/DatabaseTypeNotSupportedException.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ISchemaUpdater.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ISchemaUpdaterStep.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ITermUpdater.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ITermUpdaterStep.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/IUpdater.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/MapTableCreator.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/MnTableCreator.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SchemaUpdaterBase.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SchemaUpdaterStepBase.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SchemaUpdater_25_26.java [deleted file]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SingleTermUpdater.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/TableCreator.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/TableDroper.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/TermUpdaterBase.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/UpdaterBase.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/VocabularyCreator.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v24_25/SchemaUpdater_24_25.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SchemaUpdater_24_25.java with 84% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v24_25/SortIndexUpdater.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SortIndexUpdater.java with 92% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v24_25/TermUpdater_24_25.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/TermUpdater_24_25.java with 85% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/FeatureNodeTreeColumnUpdater.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/PolytomousKeyDataMover.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/SchemaUpdater_25_30.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/SequenceTableCreator.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/SequenceTableCreator.java with 97% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/TermUpdater_25_30.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/description/IIdentificationKeyDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/description/IPolytomousKeyDao.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/description/IPolytomousKeyNodeDao.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBase.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmGenericDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/FeatureTreeDaoImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/PolytomousKeyDaoImpl.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/PolytomousKeyNodeDaoImpl.java [new file with mode: 0644]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/reference/ReferenceDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/ClassificationDaoHibernateImpl.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonomicTreeDaoHibernateImpl.java with 65% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/reference/IReferenceDao.java
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/taxon/IClassificationDao.java [moved from cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/taxon/ITaxonomicTreeDao.java with 74% similarity]
cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/taxon/ITaxonDao.java
cdmlib-persistence/src/main/resources/eu/etaxonomy/cdm/hibernate.cfg.xml
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/TestingTermInitializer.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/datagenerator/TaxonGenerator.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/MethodCacheImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmGenericDaoImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoHibernateImplTest.java [new file with mode: 0644]
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/IdentificationKeyDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/description/PolytomousKeyDaoHibernateImplTest.java [new file with mode: 0644]
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaDaoImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaRepresentationPartDaoImplTest.java [new file with mode: 0644]
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/reference/ReferenceDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImplTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/view/AuditEventDaoTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CacheStrategyGeneratorTest.java
cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/test/function/TestPersistence.java
cdmlib-persistence/src/test/resources/META-INF/persistence.xml
cdmlib-persistence/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-persistence/src/test/resources/dbscripts/hibernate.cfg.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet-with_auditing_info.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testSave-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testSaveOrUpdate-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testSaveOrUpdateNewObjectWithAuthentication-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testSaveOrUpdateWithAuthentication-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testSaveWithAuthentication-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testUpdate-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.testUpdateWithAuthentication-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmEntityDaoBaseTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/CdmGenericDaoImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/common/IdentifiableDaoBaseTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/dataset.dtd
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoHibernateImplTest.testChangeLanguageString-result.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoHibernateImplTest.testPersistMultiLanguageString-result.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoHibernateImplTest.testRemoveLanguageString-result.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/DescriptionElementDaoHibernateImplTest.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/IdentificationKeyDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/PolytomousKeyDaoHibernateImplTest.testSavePolytomousKey-result.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/description/PolytomousKeyDaoHibernateImplTest.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaDaoImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaRepresentationPartDaoImplTest.testSave-result.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaRepresentationPartDaoImplTest.xml [new file with mode: 0644]
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/name/TaxonNameDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/name/TypeDesignationDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/reference/ReferenceDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.testAddChild-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.testDelete-result.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.testFind.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.testFindDeleted.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.testGetTaxaByNameAndArea.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImplTest.xml
cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/hibernate/replace/ReferringObjectMetadataFactoryTest.xml
cdmlib-print/pom.xml
cdmlib-print/src/main/java/eu/etaxonomy/cdm/print/XMLHelper.java
cdmlib-print/src/main/java/eu/etaxonomy/cdm/print/out/odf/OdfOutputModule.java
cdmlib-print/src/main/resources/eu/etaxonomy/cdm/print/out/odf/cdmToOdfText.xsl [moved from cdmlib-print/src/main/resources/eu/etaxonomy/printpublisher/out/odf/cdmToOdfText.xsl with 100% similarity]
cdmlib-print/src/main/resources/eu/etaxonomy/cdm/print/out/pdf/cdmToPdf.xsl [moved from cdmlib-print/src/main/resources/eu/etaxonomy/printpublisher/out/pdf/cdmToPdf.xsl with 100% similarity]
cdmlib-print/src/main/resources/eu/etaxonomy/cdm/print/package.html [new file with mode: 0644]
cdmlib-print/src/site/apt/index.apt
cdmlib-print/src/site/site.xml
cdmlib-print/src/test/java/eu/etaxonomy/cdm/print/PublisherTest.java [moved from cdmlib-print/src/test/java/eu/etaxonomy/printpublisher/PublisherTest.java with 98% similarity]
cdmlib-print/src/test/java/eu/etaxonomy/cdm/print/TransformatorTest.java [moved from cdmlib-print/src/test/java/eu/etaxonomy/printpublisher/TransformatorTest.java with 95% similarity]
cdmlib-print/src/test/java/eu/etaxonomy/cdm/print/out/odf/OdfOutputModuleTest.java [moved from cdmlib-print/src/test/java/eu/etaxonomy/printpublisher/out/odf/OdfOutputModuleTest.java with 96% similarity]
cdmlib-print/src/test/resources/eu/etaxonomy/cdm/print/out/odf/input.xml [moved from cdmlib-print/src/test/resources/eu/etaxonomy/printpublisher/out/odf/input.xml with 100% similarity]
cdmlib-print/src/test/resources/eu/etaxonomy/cdm/print/out/odf/single_input.xml [moved from cdmlib-print/src/test/resources/eu/etaxonomy/printpublisher/out/odf/single_input.xml with 100% similarity]
cdmlib-remote-webapp/pom.xml
cdmlib-remote-webapp/src/main/java/eu/etaxonomy/cdm/remote/config/DataSourceConfigurer.java
cdmlib-remote-webapp/src/main/webapp/WEB-INF/json-views.xml
cdmlib-remote-webapp/src/main/webapp/WEB-INF/xml-views.xml
cdmlib-remote/pom.xml
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationPortalController.java [moved from cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonomicTreePortalController.java with 67% similarity]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ClassificationPortalListController.java [moved from cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonomicTreePortalListController.java with 67% similarity]
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/MediaController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceListController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonPortalController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ext/ExternalBhleController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/oaipmh/ReferenceOaiPmhController.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/SetSpec.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/DerivedUnitFacadeBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/MediaBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/ReferenceBaseBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonNameBaseBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonNodeDaoBeanProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/matcher/CdmProxyBeanProcessorMatcher.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/value/PartialJSONValueProcessor.java
cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/value/URIJSONValueProcessor.java [new file with mode: 0644]
cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/oaipmh/mappings.xml
cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/json/jsonConfigurations.xml
cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/dto/assembler/lsid/AssemblerTest.java
cdmlib-services/pom.xml
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationController.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationDefaultConfiguration.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/ICdmApplicationConfiguration.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacade.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategy.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImpl.java [moved from cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonTreeServiceImpl.java with 67% similarity]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IClassificationService.java [moved from cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonTreeService.java with 78% similarity]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IPolytomousKeyService.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ITaxonService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IdentifiableServiceBase.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IdentificationKeyGenerator.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/PolytomousKeyServiceImpl.java [new file with mode: 0644]
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/ReferenceServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/TaxonServiceImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/WorkingSetService.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IIdentifiableEntityServiceConfigurator.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/ITaxonServiceConfigurator.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/impl/IdentifiableServiceConfiguratorImpl.java
cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/impl/TaxonServiceConfiguratorImpl.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategyTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.java [new file with mode: 0644]
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/NaturalLanguageGeneratorTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceImplTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonTreeServiceImplTest.java [deleted file]
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/Datasource.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestConcurrentSession.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestDatabase.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestService.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/TestTaxonFunction.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/hibernate.cfg.xml
cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/integration/TestTaxonServices.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/NameValidCharactersTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/ReferenceValidationTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/TaxonNameCannotBeAcceptedAndSynonymTest.java
cdmlib-services/src/test/java/eu/etaxonomy/cdm/validation/ValidationTest.java
cdmlib-services/src/test/resources/dbscripts/001_cdm.ddl
cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.xml
cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.testUpdateTitleCache-result.xml
cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.xml
cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/lsid/LSIDAuthorityServiceTest.testGetAvailableServices.xml
pom.xml