X-Git-Url: https://dev.e-taxonomy.eu/gitweb/cdmlib.git/blobdiff_plain/cdc9d038351238077d8a18bb65fb83b90a845398..512211e11403b7fd95ce288a39755358d66f7d24:/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java

diff --git a/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java b/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java
index 0476c044af..7157c4ced7 100644
--- a/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java
+++ b/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java
@@ -13,15 +13,19 @@ import java.util.UUID;
 
 import org.apache.log4j.Logger;
 
+import eu.etaxonomy.cdm.api.application.CdmApplicationController;
 import eu.etaxonomy.cdm.app.common.CdmDestinations;
 import eu.etaxonomy.cdm.database.DbSchemaValidation;
 import eu.etaxonomy.cdm.database.ICdmDataSource;
-import eu.etaxonomy.cdm.io.berlinModel.BerlinModelImport;
 import eu.etaxonomy.cdm.io.berlinModel.BerlinModelImportConfigurator;
+import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
+import eu.etaxonomy.cdm.io.common.Source;
 import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
 import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES;
-import eu.etaxonomy.cdm.io.common.Source;
+import eu.etaxonomy.cdm.model.common.ISourceable;
+import eu.etaxonomy.cdm.model.description.FeatureTree;
 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.cdm.model.name.ZoologicalName;
 
 
 /**
@@ -39,17 +43,22 @@ public class DipteraActivator {
 	//database validation status (create, update, validate ...)
 	static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;
 	static final Source berlinModelSource = BerlinModelSources.EDIT_Diptera();
-	static final ICdmDataSource cdmDestination = CdmDestinations.cdm_edit_diptera();
+	static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
 	static final UUID secUuid = UUID.fromString("06fd671f-1226-4e3b-beca-1959b3b32e20");
 	static final int sourceSecId = 1000000;
+	static final UUID featureTreeUuid = UUID.fromString("ae9615b8-bc60-4ed0-ad96-897f9226d568");
+	static final Object[] featureKeyList = new Integer[]{1,4,5,10,11,12,13,99}; 
 	
 	//check - import
-	static final CHECK check = CHECK.CHECK_AND_IMPORT;
+	static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
 
 
 	//NomeclaturalCode
-	static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICBN();
+	static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICZN();
 
+	//ignore null
+	static final boolean ignoreNull = true;
+	
 	//authors
 	static final boolean doAuthors = true;
 	//references
@@ -81,7 +90,7 @@ public class DipteraActivator {
 //	//taxa
 //	static final boolean doTaxa = false;
 //	static final boolean doRelTaxa = false;
-//	static final boolean doFacts = true;
+//	static final boolean doFacts = false;
 //	static final boolean doOccurences = false;
 	
 	
@@ -102,6 +111,7 @@ public class DipteraActivator {
 		bmImportConfigurator.setSourceSecId(sourceSecId);
 		bmImportConfigurator.setNomenclaturalCode(nomenclaturalCode);
 
+		bmImportConfigurator.setIgnoreNull(ignoreNull);
 		bmImportConfigurator.setDoAuthors(doAuthors);
 		bmImportConfigurator.setDoReferences(doReferences);
 		bmImportConfigurator.setDoTaxonNames(doTaxonNames);
@@ -119,9 +129,23 @@ public class DipteraActivator {
 		bmImportConfigurator.setCheck(check);
 		
 		// invoke import
-		BerlinModelImport bmImport = new BerlinModelImport();
+		CdmDefaultImport<BerlinModelImportConfigurator> bmImport = new CdmDefaultImport<BerlinModelImportConfigurator>();
 		bmImport.invoke(bmImportConfigurator);
 		
+		if (bmImportConfigurator.getCheck().equals(CHECK.CHECK_AND_IMPORT)  || bmImportConfigurator.getCheck().equals(CHECK.IMPORT_WITHOUT_CHECK)    ){
+			CdmApplicationController app = bmImportConfigurator.getCdmAppController();
+			ISourceable obj = app.getCommonService().getSourcedObjectByIdInSource(ZoologicalName.class, "1000027", null);
+			logger.info(obj);
+		
+			//parse distributions
+			DipteraDistributionParser dipDist = new DipteraDistributionParser();
+			dipDist.doDistribution(app);
+						
+			//make feature tree
+			FeatureTree tree = TreeCreator.flatTree(featureTreeUuid, bmImportConfigurator.getFeatureMap(), featureKeyList);
+			app = bmImportConfigurator.getCdmAppController();
+			app.getDescriptionService().saveFeatureTree(tree);
+		}
 		System.out.println("End import from BerlinModel ("+ source.getDatabase() + ")...");
 	}