X-Git-Url: https://dev.e-taxonomy.eu/gitweb/cdmlib.git/blobdiff_plain/adadf4fa77d430a52c3ef71ce0b250b73e771dd8..45546a913cf144912d383d54758aa51c81367ec9:/cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java?ds=sidebyside

diff --git a/cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java b/cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java
index 3f5b2ac443..71e528a8da 100644
--- a/cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java
+++ b/cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/IReferenceService.java
@@ -1,91 +1,30 @@
 // $Id$
 /**
 * Copyright (C) 2007 EDIT
-* European Distributed Institute of Taxonomy 
+* European Distributed Institute of Taxonomy
 * http://www.e-taxonomy.eu
-* 
+*
 * The contents of this file are subject to the Mozilla Public License Version 1.1
 * See LICENSE.TXT at the top of this package for the full license terms.
 */
 
 package eu.etaxonomy.cdm.api.service;
 
-import java.util.Collection;
 import java.util.List;
-import java.util.Map;
-import java.util.UUID;
 
 import eu.etaxonomy.cdm.api.service.pager.Pager;
-import eu.etaxonomy.cdm.model.reference.ReferenceBase;
+import eu.etaxonomy.cdm.model.reference.Reference;
+import eu.etaxonomy.cdm.model.taxon.TaxonBase;
+import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
 import eu.etaxonomy.cdm.persistence.query.OrderHint;
 
 
-public interface IReferenceService extends IIdentifiableEntityService<ReferenceBase> {
-	
-	/**
-	 * FIXME candidate for harmonization?
-	 *  
-	 * Finds reference by UUID 
-	 */
-	public abstract ReferenceBase getReferenceByUuid(UUID uuid);
+public interface IReferenceService extends IIdentifiableEntityService<Reference> {
 
 	/**
-	 * FIXME candidate for harmonization?
-	 * Finds references by title 
-	 */
-	public List<ReferenceBase> getReferencesByTitle(String title);
-		
-	/**
-	 * FIXME candidate for harmonization?
-	 * Finds references of a certain kind by title 
-	 */
-	public List<ReferenceBase> getReferencesByTitle(String title, Class<ReferenceBase> clazz);
-	
-	/**
-	 * FIXME candidate for harmonization? 
-	 * Gets all references 
-	 * @deprecated use {@link #getAllReferences(Integer, Integer) instead
-	 */
-	@Deprecated
-	public abstract List<ReferenceBase> getAllReferences(int limit, int start);
-	
-	/**
-	 * Gets all references ordered by the properties defined by <code>orderHints</code>
-	 * @param pageSize the maximum number of entities returned entries per page. Can be null to return all entities.
-	 * @param pageNumber a numeric zero based page index 
-	 * @param orderHints
-	 * @return a Pager instance
-	 */
-	public Pager<ReferenceBase> getAllReferences(Integer pageSize, Integer pageNumber, List<OrderHint> orderHints);
-	
-	/**
-	 * Gets all references unordered
-	 * @param pageSize the maximum number of entities returned entries per page. Can be null to return all entities.
-	 * @param pageNumber a numeric zero based page index 
-	 * @return a Pager instance
-	 */
-	public abstract Pager<ReferenceBase> getAllReferences(Integer pageSize, Integer pageNumber);
-
-//	public abstract UUID saveReference(ReferenceBase reference);
-
-	/** 
-	 * FIXME candidate for harmonization?
-	 * Saves a reference and return its UUID 
-	 */
-	public abstract UUID saveReference(ReferenceBase reference);
-
-//	public abstract Map<UUID, ReferenceBase> saveReferenceAll(Collection<ReferenceBase> referenceCollection);
-	
-	/**
-	 * FIXME candidate for harmonization? 
-	 * Saves a collection of references
-	 */
-	public abstract Map<UUID, ReferenceBase> saveReferenceAll(Collection<ReferenceBase> referenceCollection);
-	
-	/**
-	 * Returns a Paged List of ReferenceBase instances where the default field matches the String queryString (as interpreted by the Lucene QueryParser)
-	 * 
-	 * @param clazz filter the results by class (or pass null to return all ReferenceBase instances)
+	 * Returns a Paged List of Reference instances where the default field matches the String queryString (as interpreted by the Lucene QueryParser)
+	 *
+	 * @param clazz filter the results by class (or pass null to return all Reference instances)
 	 * @param queryString
 	 * @param pageSize The maximum number of references returned (can be null for all matching references)
 	 * @param pageNumber The offset (in pageSize chunks) from the start of the result set (0 - based)
@@ -94,17 +33,53 @@ public interface IReferenceService extends IIdentifiableEntityService<ReferenceB
 	 *            include *-to-one properties like createdBy.username or
 	 *            authorTeam.persistentTitleCache
 	 * @param propertyPaths properties to be initialized
-	 * @return a Pager ReferenceBase instances
+	 * @return a Pager Reference instances
 	 * @see <a href="http://lucene.apache.org/java/2_4_0/queryparsersyntax.html">Apache Lucene - Query Parser Syntax</a>
 	 */
-	public Pager<ReferenceBase> search(Class<? extends ReferenceBase> clazz, String queryString, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths);
-	
+	@Override
+    public Pager<Reference> search(Class<? extends Reference> clazz, String queryString, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths);
+
 	/**
 	 * Returns a map that holds uuid, titleCache pairs of all references in the current database
-	 * 
-	 * @return 
+	 *
+	 * @return
 	 * 			a <code>Map</code> containing uuid and titleCache of references
 	 */
-	public Map<UUID, String> getUuidAndTitleCacheOfReferences();
-	
+	public List<UuidAndTitleCache<Reference>> getUuidAndTitle();
+
+	/**
+	 * TODO candidate for harmonization: rename to listForPublishing
+	 * @return
+	 */
+	public List<Reference> getAllReferencesForPublishing();
+
+	/**
+	 * TODO candidate for harmonization: rename to listNomenclaturalReferences
+	 * @return
+	 */
+	public List<Reference> getAllNomenclaturalReferences();
+
+	/**
+	 * returns
+	 *
+	 * <ol>
+	 * <li>all taxa directly covered by this reference</li>
+	 * <li>all taxa covered by the according in references of this reference</li>
+	 * </ol>
+	 *
+	 * searches for taxa using the following relations:
+	 * <ul>
+	 * <li>taxon.name.nomenclaturalreference</li>
+	 * <li>taxon.descriptions.descriptionElement.sources.citation</li>
+	 * <li>taxon.descriptions.descriptionSources</li>
+	 * <li>taxon.name.descriptions.descriptionElement.sources</li>
+	 * <li>taxon.name.descriptions.descriptionSources</li>
+	 * </ul>
+	 *
+	 * @param reference
+	 * @param includeSubordinateReferences TODO
+	 * @param propertyPaths
+	 * @return
+	 */
+	public List<TaxonBase> listCoveredTaxa(Reference reference, boolean includeSubordinateReferences, List<String> propertyPaths);
 }