#3626 (description feature and it's children missing in Flora Malesiana)

[cdmlib.git] / .gitattributes

diff --git a/.gitattributes b/.gitattributes
index 4871c9d0fb67c4edf3b2b840b61e5e4471a099a1..7c2d268635afab848a72cd52aa8948d6401efdce 100644 (file)
--- a/.gitattributes
+++ b/.gitattributes
@@ -305,10 +305,12 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/out/ICsvAreaRecord.java
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/TermUri.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/ConcatenatingReader.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/CsvStream.java -text
-cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/CsvStreamItem.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DatabaseMapping.java -text
-cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcTaxonCsv2CdmTaxonConverter.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcTaxonCsv2CdmTaxonRelationConverter.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcTaxonStreamItem2CdmTaxonConverter.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaDataImportBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaDataImportConfiguratorBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaDataImportStateBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaImportConfigurator.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/dwca/in/DwcaImportState.java -text
@@ -382,6 +384,12 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/common/ExcelRowBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/common/ExcelTaxonOrSpecimenImportBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/distribution/DistributionImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/distribution/DistributionImportConfigurator.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelMapReader.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelRecordStream.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImport.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImportConfigurator.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImportState.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/stream/ExcelToStreamConverter.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportConfigurator.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitRow.java -text
@@ -448,6 +456,7 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDDocumentBuilder.java -tex
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDExportConfigurator.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/sdd/out/SDDExportState.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/SpecimenImportBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/SpecimenUserInteraction.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/UnitsGatheringArea.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/UnitsGatheringEvent.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206DataHolder.java -text
@@ -467,6 +476,11 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenRow.java -
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenSynthesysExcelImportConfigurator.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenSynthesysExcelImportState.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/SpecimenSythesysExcelImport.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/stream/IItemStream.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/stream/StreamImportBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/stream/StreamImportConfiguratorBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/stream/StreamImportStateBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/stream/StreamItem.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/SimpleSpecimen.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXDescriptionImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportConfigurator.java -text
@@ -474,6 +488,14 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportState.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXModsImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXNomenclatureImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXTransformer.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXDataHolder.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXExtractor.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXImport.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXImportConfigurator.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXImportState.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXModsExtractor.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXTreatmentExtractor.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXXMLFieldGetter.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmOneToManyXmlMapper.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmSingleAttributeXmlMapperBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmTextElementMapper.java -text
@@ -508,6 +530,7 @@ cdmlib-io/src/main/resources/CatalogManager.properties -text
 cdmlib-io/src/main/resources/catalog.xml -text
 cdmlib-io/src/main/resources/eu/etaxonomy/cdm/defaultIoApplicationContext.xml -text
 cdmlib-io/src/main/resources/eu/etaxonomy/cdm/io/dwca/out/DwcaTaxExportConfigurator.properties -text
+cdmlib-io/src/main/resources/eu/etaxonomy/cdm/io/excel/ExcelImportMapping.properties -text
 cdmlib-io/src/main/resources/log4j.properties -text
 cdmlib-io/src/main/resources/mapping/lifeStageToGbif.tsv -text
 cdmlib-io/src/main/resources/mapping/nameTypeStatusToGbif.tsv -text
@@ -533,6 +556,7 @@ cdmlib-io/src/main/resources/schema/xml/xml.xsd -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/dwca/in/DatabaseMappingTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/dwca/in/DwcaImportIntegrationTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/dwca/in/DwcaZipToStreamConverterTest.java -text
+cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImportTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/AgentsTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/jaxb/AnnotationTest.java -text
@@ -559,6 +583,7 @@ cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/sdd/in/SDDImportBenchmark.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/sdd/in/SDDImportExportTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/sdd/in/SDDImportTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/sdd/out/SDDCdmExporterTest.java -text
+cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/ABCDImportConfiguratorTestNonEmptyDB.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelImportConfiguratorTest.java -text
 cdmlib-io/src/test/java/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelSpecimenImportExampleTest.java -text
@@ -577,6 +602,8 @@ cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dwca/in/coreTax.txt -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dwca/in/description.txt -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dwca/in/meta.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/dwca/in/vernacular.txt -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImport-TestInput.xls -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/excel/stream/ExcelStreamImportTest.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/excel/taxa/DenormalExplicit.xls -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/excel/taxa/DenormalImplied.xls -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/excel/taxa/NormalExplicitImportTest-input-original.xls -text
@@ -630,6 +657,8 @@ cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/varanusSDD_RatingExample2.x
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/varanusSDD_RatingExample3_contextual.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/varanusSDD_RatingExample_mod.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/wrongSDD.xml -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/ABCDImportTestCalvumPart1.xml -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/ABCDImportTestCalvumPart2.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest-input.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelImportConfiguratorTest-input.xls -text
@@ -1504,7 +1533,6 @@ cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet-wit
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/database/TermsDataSet.xml -text
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/BeanInitializerIntegration.xml -text
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/FreeTextSearchIntegration.xml -text
-cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/FreeTextSearchIntegration.xml.backup -text
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/agent/AgentDaoImplTest.testDelete-result.xml -text
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/agent/AgentDaoImplTest.testExists.xml -text
 cdmlib-persistence/src/test/resources/eu/etaxonomy/cdm/persistence/dao/hibernate/agent/AgentDaoImplTest.testFind.xml -text
@@ -1696,12 +1724,15 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DerivedUnitFacade
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DerivedUnitFacadePortalController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionListController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionListPortalController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/DescriptionPortalController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/EventBaseController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureListController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureNodeController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureTreeController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureTreeListController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureTreeListPortalController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/FeatureTreePortalController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/HttpStatusMessage.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/IdDoesNotExistException.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/IdentifiableListController.java -text
@@ -1723,6 +1754,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/PolytomousKeyPort
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ProgressMonitorController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferenceListController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ReferencePortalController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/StatisticsController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TaxonListController.java -text
@@ -1823,6 +1855,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/TaxonRelationsh
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/Team.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/CdmTypePropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/DateTimeEditor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/DefinedTermBaseList.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/IsoDateTimeEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/LSIDAuthorityPropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/LSIDPropertyEditor.java -text
@@ -1833,6 +1866,8 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/NamedAreaPropertyEdit
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/RankPropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/RectanglePropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/SetSpecEditor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/TermBaseListPropertyEditor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/TermBasePropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/UUIDListPropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/UUIDPropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/UuidList.java -text