import org.springframework.beans.MutablePropertyValues;\r
import org.springframework.beans.factory.config.BeanDefinition;\r
import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;\r
+import org.springframework.context.ApplicationListener;\r
import org.springframework.context.support.AbstractApplicationContext;\r
-import org.springframework.context.support.GenericApplicationContext;\r
import org.springframework.core.io.ClassPathResource;\r
import org.springframework.core.io.Resource;\r
import org.springframework.security.authentication.ProviderManager;\r
import org.springframework.transaction.PlatformTransactionManager;\r
-import org.springframework.transaction.TransactionDefinition;\r
import org.springframework.transaction.TransactionStatus;\r
-import org.springframework.transaction.support.DefaultTransactionDefinition;\r
\r
-import eu.etaxonomy.cdm.api.application.eclipse.EclipseRcpSaveGenericApplicationContext;\r
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
import eu.etaxonomy.cdm.api.service.IAgentService;\r
+import eu.etaxonomy.cdm.api.service.IClassificationService;\r
import eu.etaxonomy.cdm.api.service.ICollectionService;\r
import eu.etaxonomy.cdm.api.service.ICommonService;\r
import eu.etaxonomy.cdm.api.service.IDatabaseService;\r
import eu.etaxonomy.cdm.api.service.IDescriptionService;\r
import eu.etaxonomy.cdm.api.service.IFeatureNodeService;\r
import eu.etaxonomy.cdm.api.service.IFeatureTreeService;\r
+import eu.etaxonomy.cdm.api.service.IGroupService;\r
+import eu.etaxonomy.cdm.api.service.IIdentificationKeyService;\r
import eu.etaxonomy.cdm.api.service.ILocationService;\r
import eu.etaxonomy.cdm.api.service.IMediaService;\r
import eu.etaxonomy.cdm.api.service.INameService;\r
import eu.etaxonomy.cdm.api.service.IOccurrenceService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;\r
import eu.etaxonomy.cdm.api.service.IReferenceService;\r
import eu.etaxonomy.cdm.api.service.IService;\r
import eu.etaxonomy.cdm.api.service.ITaxonNodeService;\r
import eu.etaxonomy.cdm.api.service.ITaxonService;\r
-import eu.etaxonomy.cdm.api.service.ITaxonTreeService;\r
import eu.etaxonomy.cdm.api.service.ITermService;\r
import eu.etaxonomy.cdm.api.service.IUserService;\r
import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
-import eu.etaxonomy.cdm.common.IProgressMonitor;\r
-import eu.etaxonomy.cdm.common.NullProgressMonitor;\r
+import eu.etaxonomy.cdm.api.service.IWorkingSetService;\r
+import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;\r
+import eu.etaxonomy.cdm.common.monitor.NullProgressMonitor;\r
+import eu.etaxonomy.cdm.common.monitor.SubProgressMonitor;\r
import eu.etaxonomy.cdm.database.CdmPersistentDataSource;\r
import eu.etaxonomy.cdm.database.DataSourceNotFoundException;\r
import eu.etaxonomy.cdm.database.DbSchemaValidation;\r
import eu.etaxonomy.cdm.model.common.CdmMetaData;\r
import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
import eu.etaxonomy.cdm.model.common.User;\r
-import eu.etaxonomy.cdm.model.common.init.TermNotFoundException;\r
\r
\r
/**\r
\r
private IProgressMonitor progressMonitor;\r
\r
- final static DbSchemaValidation defaultDbSchemaValidation = DbSchemaValidation.VALIDATE;\r
+ final protected static DbSchemaValidation defaultDbSchemaValidation = DbSchemaValidation.VALIDATE;\r
\r
\r
\r
/**\r
- * Constructor, opens an spring 2.5 ApplicationContext by using the default data source\r
+ * Constructor, opens a spring ApplicationContext by using the default data source\r
+ * @throws DataSourceNotFoundException \r
*/\r
- public static CdmApplicationController NewInstance() throws DataSourceNotFoundException, TermNotFoundException {\r
+ public static CdmApplicationController NewInstance() throws DataSourceNotFoundException {\r
logger.info("Start CdmApplicationController with default data source");\r
- CdmPersistentDataSource dataSource = CdmPersistentDataSource.NewDefaultInstance();\r
+ CdmPersistentDataSource dataSource = getDefaultDatasource();\r
DbSchemaValidation dbSchemaValidation = defaultDbSchemaValidation;\r
return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
}\r
\r
/**\r
- * Constructor, opens an spring 2.5 ApplicationContext by using the default data source\r
+ * Constructor, opens a spring ApplicationContext by using the default data source\r
* @param dbSchemaValidation validation type for database schema\r
+ * @throws DataSourceNotFoundException \r
*/\r
- public static CdmApplicationController NewInstance(DbSchemaValidation dbSchemaValidation) throws DataSourceNotFoundException, TermNotFoundException {\r
+ public static CdmApplicationController NewInstance(DbSchemaValidation dbSchemaValidation) throws DataSourceNotFoundException {\r
logger.info("Start CdmApplicationController with default data source");\r
- CdmPersistentDataSource dataSource = CdmPersistentDataSource.NewDefaultInstance();\r
+ CdmPersistentDataSource dataSource = getDefaultDatasource();\r
return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
}\r
\r
\r
/**\r
- * Constructor, opens an spring 2.5 ApplicationContext by using the according data source and the\r
+ * Constructor, opens an spring ApplicationContext by using the according data source and the\r
* default database schema validation type\r
* @param dataSource\r
*/\r
- public static CdmApplicationController NewInstance(ICdmDataSource dataSource) \r
- throws DataSourceNotFoundException, TermNotFoundException{\r
+ public static CdmApplicationController NewInstance(ICdmDataSource dataSource) {\r
return CdmApplicationController.NewInstance(null, dataSource, defaultDbSchemaValidation, false);\r
}\r
\r
- public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation) \r
- throws DataSourceNotFoundException, TermNotFoundException{\r
+ public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation) {\r
return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
}\r
\r
- public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) \r
- throws DataSourceNotFoundException, TermNotFoundException{\r
+ public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) {\r
return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, omitTermLoading);\r
}\r
\r
- public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) \r
- throws DataSourceNotFoundException, TermNotFoundException{\r
+ public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) {\r
return CdmApplicationController.NewInstance(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, null);\r
}\r
\r
- public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor) \r
- throws DataSourceNotFoundException, TermNotFoundException{\r
+ public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor) {\r
+ return new CdmApplicationController(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, progressMonitor, null);\r
+ }\r
+ \r
+ //TODO discuss need for listeners before commit to trunk\r
+// public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor, List<ApplicationListener> listeners) {\r
+// return new CdmApplicationController(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, progressMonitor,listeners);\r
+// }\r
\r
- \r
- return new CdmApplicationController(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, progressMonitor);\r
+\r
+ /**\r
+ * @return\r
+ */\r
+ protected static ClassPathResource getClasspathResource() {\r
+ return new ClassPathResource(DEFAULT_APPLICATION_CONTEXT_RESOURCE);\r
+ } \r
+\r
+ /**\r
+ * @return\r
+ * @throws DataSourceNotFoundException \r
+ */\r
+ protected static CdmPersistentDataSource getDefaultDatasource() throws DataSourceNotFoundException {\r
+ CdmPersistentDataSource dataSource = CdmPersistentDataSource.NewDefaultInstance();\r
+ return dataSource;\r
}\r
\r
+\r
/**\r
* Constructor, opens an spring 2.5 ApplicationContext by using the according data source\r
* @param dataSource\r
* @param dbSchemaValidation\r
* @param omitTermLoading\r
*/\r
- private CdmApplicationController(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor){\r
+ protected CdmApplicationController(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor, List<ApplicationListener> listeners){\r
logger.info("Start CdmApplicationController with datasource: " + dataSource.getName());\r
\r
if (dbSchemaValidation == null){\r
dbSchemaValidation = defaultDbSchemaValidation;\r
}\r
- \r
- this.applicationContextResource = applicationContextResource != null ? applicationContextResource : new ClassPathResource(DEFAULT_APPLICATION_CONTEXT_RESOURCE);\r
+ this.applicationContextResource = applicationContextResource != null ? applicationContextResource : getClasspathResource();\r
this.progressMonitor = progressMonitor != null ? progressMonitor : new NullProgressMonitor();\r
\r
- setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading);\r
+ setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, listeners);\r
}\r
- \r
+\r
\r
/**\r
* Sets the application context to a new spring ApplicationContext by using the according data source and initializes the Controller.\r
* @param dataSource\r
*/\r
- private boolean setNewDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading){\r
+ private boolean setNewDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, List<ApplicationListener> listeners){\r
+\r
if (dbSchemaValidation == null){\r
dbSchemaValidation = defaultDbSchemaValidation;\r
}\r
logger.info("Connecting to '" + dataSource.getName() + "'");\r
- progressMonitor.subTask("Connecting to '" + dataSource.getName() + "'");\r
- progressMonitor.worked(1);\r
-\r
- GenericApplicationContext appContext;\r
- appContext = new EclipseRcpSaveGenericApplicationContext();\r
\r
+ MonitoredGenericApplicationContext applicationContext = new MonitoredGenericApplicationContext();\r
+ int refreshTasks = 45;\r
+ int nTasks = 5 + refreshTasks;\r
+// nTasks += applicationContext.countTasks();\r
+ progressMonitor.beginTask("Connecting to '" + dataSource.getName() + "'", nTasks);\r
+ \r
+// progressMonitor.worked(1);\r
+\r
BeanDefinition datasourceBean = dataSource.getDatasourceBean();\r
datasourceBean.setAttribute("isLazy", false);\r
progressMonitor.subTask("Registering datasource.");\r
+ applicationContext.registerBeanDefinition("dataSource", datasourceBean);\r
progressMonitor.worked(1);\r
- appContext.registerBeanDefinition("dataSource", datasourceBean);\r
\r
BeanDefinition hibernatePropBean= dataSource.getHibernatePropertiesBean(dbSchemaValidation);\r
- appContext.registerBeanDefinition("hibernateProperties", hibernatePropBean);\r
+ applicationContext.registerBeanDefinition("hibernateProperties", hibernatePropBean);\r
\r
- XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(appContext);\r
- progressMonitor.subTask("Registering context resources.");\r
+ XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(applicationContext);\r
+ progressMonitor.subTask("Registering resources.");\r
+ xmlReader.loadBeanDefinitions(applicationContextResource);\r
progressMonitor.worked(1);\r
- xmlReader.loadBeanDefinitions(this.applicationContextResource); \r
\r
//omitTerms\r
- String initializerName = "persistentTermInitializer";\r
- BeanDefinition beanDef = appContext.getBeanDefinition(initializerName);\r
- MutablePropertyValues values = beanDef.getPropertyValues();\r
- values.addPropertyValue("omit", omitTermLoading);\r
+ if (omitTermLoading == true){\r
+ String initializerName = "persistentTermInitializer";\r
+ BeanDefinition beanDef = applicationContext.getBeanDefinition(initializerName);\r
+ MutablePropertyValues values = beanDef.getPropertyValues();\r
+ values.addPropertyValue("omit", omitTermLoading);\r
+ }\r
\r
- progressMonitor.subTask("Starting context. This might take a while...");\r
- progressMonitor.worked(1);\r
- appContext.refresh();\r
- appContext.start();\r
+ if (listeners != null){\r
+ for(ApplicationListener listener : listeners){\r
+ applicationContext.addApplicationListener(listener);\r
+ }\r
+ }\r
+ \r
+// String message = "Start application context. This might take a while ...";\r
+//// progressMonitor.subTask(message);\r
+// SubProgressMonitor subMonitor= new SubProgressMonitor(progressMonitor, 10);\r
+// subMonitor.beginTask(message, 2);\r
+// applicationContext.setProgressMonitor(subMonitor);\r
+ \r
+ applicationContext.refresh(new SubProgressMonitor(progressMonitor, refreshTasks));\r
+ applicationContext.start();\r
+// progressMonitor.worked(1);\r
\r
- progressMonitor.subTask("Setting application context.");\r
+ progressMonitor.subTask("Cleaning up.");\r
+ setApplicationContext(applicationContext);\r
progressMonitor.worked(1);\r
- setApplicationContext(appContext);\r
\r
//initialize user and metaData for new databases\r
int userCount = getUserService().count(User.class);\r
if (userCount == 0 ){\r
progressMonitor.subTask("Creating Admin User");\r
- progressMonitor.worked(1);\r
createAdminUser();\r
}\r
+ progressMonitor.worked(1);\r
+\r
+ //CDM Meta Data\r
int metaDataCount = getCommonService().getCdmMetaData().size();\r
if (metaDataCount == 0){\r
progressMonitor.subTask("Creating Meta Data");\r
- progressMonitor.worked(1);\r
createMetadata();\r
}\r
- \r
+ progressMonitor.worked(1);\r
+\r
+ progressMonitor.done();\r
return true;\r
}\r
\r
- private void createAdminUser(){\r
- User firstUser = User.NewInstance("admin", "0000");\r
+ protected void createAdminUser(){\r
+ User firstUser = User.NewInstance("admin", "00000");\r
getUserService().save(firstUser);\r
logger.info("Admin user created.");\r
}\r
\r
- private void createMetadata(){\r
+ protected void createMetadata(){\r
List<CdmMetaData> metaData = CdmMetaData.defaultMetaData();\r
getCommonService().saveAllMetaData(metaData);\r
logger.info("Metadata created.");\r
*/\r
public boolean testDefinedTermsAreMissing(){\r
UUID englishUuid = UUID.fromString("e9f8cdb7-6819-44e8-95d3-e2d0690c3523");\r
- DefinedTermBase<?> english = this.getTermService().getByUri(englishUuid.toString());\r
+ DefinedTermBase<?> english = this.getTermService().load(englishUuid);\r
if ( english == null || ! english.getUuid().equals(englishUuid)){\r
return true;\r
}else{\r
*/\r
public boolean changeDataSource(ICdmDataSource dataSource){\r
//logger.info("Change datasource to : " + dataSource);\r
- return setNewDataSource(dataSource, DbSchemaValidation.VALIDATE, false);\r
+ return setNewDataSource(dataSource, DbSchemaValidation.VALIDATE, false, null);\r
}\r
\r
/**\r
*/\r
public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation){\r
//logger.info("Change datasource to : " + dataSource);\r
- return setNewDataSource(dataSource, dbSchemaValidation, false);\r
+ return setNewDataSource(dataSource, dbSchemaValidation, false, null);\r
}\r
\r
/**\r
*/\r
public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading){\r
logger.info("Change datasource to : " + dataSource);\r
- return setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading);\r
+ return setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, null);\r
+ }\r
+ \r
+ /**\r
+ * Changes the ApplicationContext to the new dataSource\r
+ * @param dataSource\r
+ * @param dbSchemaValidation\r
+ * @param omitTermLoading\r
+ */\r
+ public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, List<ApplicationListener> listeners){\r
+ logger.info("Change datasource to : " + dataSource);\r
+ return setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, listeners);\r
}\r
\r
/**\r
/**\r
* closes the application context\r
*/\r
- private void closeApplicationContext(){\r
+ protected void closeApplicationContext(){\r
if (applicationContext != null){\r
logger.info("Close ApplicationContext");\r
applicationContext.close();\r
}\r
}\r
\r
- private void init(){\r
+ protected void init(){\r
logger.debug("Init " + this.getClass().getName() + " ... ");\r
if (logger.isDebugEnabled()){for (String beanName : applicationContext.getBeanDefinitionNames()){ logger.debug(beanName);}}\r
//TODO delete next row (was just for testing)\r
if (logger.isInfoEnabled()){\r
logger.info("Registered Beans: ");\r
- progressMonitor.subTask("Registered Beans: ");\r
String[] beanNames = applicationContext.getBeanDefinitionNames();\r
for (String beanName : beanNames){\r
logger.info(beanName);\r
- progressMonitor.subTask(beanName);\r
}\r
}\r
configuration = (ICdmApplicationConfiguration)applicationContext.getBean("cdmApplicationDefaultConfiguration");\r
return configuration.getTaxonService();\r
}\r
\r
- public final ITaxonTreeService getTaxonTreeService(){\r
- return configuration.getTaxonTreeService();\r
+ public final IClassificationService getClassificationService(){\r
+ return configuration.getClassificationService();\r
}\r
\r
public final ITaxonNodeService getTaxonNodeService(){\r
public final IUserService getUserService(){\r
return configuration.getUserService();\r
}\r
+\r
+ public IGroupService getGroupService() {\r
+ return configuration.getGroupService();\r
+ }\r
\r
public final ICollectionService getCollectionService(){\r
return configuration.getCollectionService();\r
\r
public final IVocabularyService getVocabularyService(){\r
return configuration.getVocabularyService();\r
- } \r
+ }\r
+ \r
+ public final IIdentificationKeyService getIdentificationKeyService(){\r
+ return configuration.getIdentificationKeyService();\r
+ }\r
+\r
+ public final IPolytomousKeyService getPolytomousKeyService(){\r
+ return configuration.getPolytomousKeyService();\r
+ }\r
+\r
+ public final IPolytomousKeyNodeService getPolytomousKeyNodeService(){\r
+ return configuration.getPolytomousKeyNodeService();\r
+ }\r
\r
public final IService<CdmBase> getMainService(){\r
return configuration.getMainService();\r
}\r
\r
+ public final IWorkingSetService getWorkingSetService(){\r
+ return configuration.getWorkingSetService();\r
+ }\r
+ \r
public final ConversationHolder NewConversation(){\r
//return (ConversationHolder)applicationContext.getBean("conversationHolder");\r
return configuration.NewConversation();\r
}\r
\r
public TransactionStatus startTransaction() {\r
- \r
return startTransaction(false);\r
}\r
\r
public TransactionStatus startTransaction(Boolean readOnly) {\r
- \r
- PlatformTransactionManager txManager = configuration.getTransactionManager();\r
- \r
- DefaultTransactionDefinition defaultTxDef = new DefaultTransactionDefinition();\r
- defaultTxDef.setReadOnly(readOnly);\r
- TransactionDefinition txDef = defaultTxDef;\r
-\r
- // Log some transaction-related debug information.\r
- if (logger.isDebugEnabled()) {\r
- logger.debug("Transaction name = " + txDef.getName());\r
- logger.debug("Transaction facets:");\r
- logger.debug("Propagation behavior = " + txDef.getPropagationBehavior());\r
- logger.debug("Isolation level = " + txDef.getIsolationLevel());\r
- logger.debug("Timeout = " + txDef.getTimeout());\r
- logger.debug("Read Only = " + txDef.isReadOnly());\r
- // org.springframework.orm.hibernate3.HibernateTransactionManager\r
- // provides more transaction/session-related debug information.\r
- }\r
- \r
- TransactionStatus txStatus = txManager.getTransaction(txDef);\r
- return txStatus;\r
+ return configuration.startTransaction(readOnly);\r
}\r
\r
public void commitTransaction(TransactionStatus txStatus){\r
return;\r
}\r
\r
+\r
+\r
}\r