preparations for secutity implementation in taxeditor ApplicationController
[cdmlib.git] / cdmlib-services / src / main / java / eu / etaxonomy / cdm / api / application / CdmApplicationController.java
index 7b44150ed38733b44d66aff1e63b90bf8b37ddd5..413ca321e3a7b1e8ee96877a4ca6dc0bd8054ecd 100644 (file)
+// $Id$\r
+/**\r
+ * Copyright (C) 2007 EDIT\r
+ * European Distributed Institute of Taxonomy\r
+ * http://www.e-taxonomy.eu\r
+ *\r
+ * The contents of this file are subject to the Mozilla Public License Version 1.1\r
+ * See LICENSE.TXT at the top of this package for the full license terms.\r
+ */\r
+\r
+\r
 package eu.etaxonomy.cdm.api.application;\r
 \r
-import java.io.FileNotFoundException;\r
+import java.util.EnumSet;\r
+import java.util.List;\r
 import java.util.UUID;\r
 \r
 import org.apache.log4j.Logger;\r
 import org.hibernate.SessionFactory;\r
-import org.hsqldb.Server;\r
-import org.springframework.beans.factory.BeanCreationException;\r
+import org.springframework.beans.MutablePropertyValues;\r
 import org.springframework.beans.factory.config.BeanDefinition;\r
 import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;\r
-import org.springframework.context.ApplicationContext;\r
+import org.springframework.context.ApplicationListener;\r
 import org.springframework.context.support.AbstractApplicationContext;\r
-import org.springframework.context.support.AbstractXmlApplicationContext;\r
-import org.springframework.context.support.ClassPathXmlApplicationContext;\r
-import org.springframework.context.support.FileSystemXmlApplicationContext;\r
-import org.springframework.context.support.GenericApplicationContext;\r
 import org.springframework.core.io.ClassPathResource;\r
+import org.springframework.core.io.Resource;\r
+import org.springframework.security.access.PermissionEvaluator;\r
+import org.springframework.security.authentication.ProviderManager;\r
+import org.springframework.security.core.context.SecurityContext;\r
+import org.springframework.security.core.context.SecurityContextHolder;\r
+import org.springframework.transaction.PlatformTransactionManager;\r
+import org.springframework.transaction.TransactionStatus;\r
 \r
-import eu.etaxonomy.cdm.api.application.eclipse.EclipseRcpSaveFileSystemXmlApplicationContext;\r
+import eu.etaxonomy.cdm.api.conversation.ConversationHolder;\r
 import eu.etaxonomy.cdm.api.service.IAgentService;\r
+import eu.etaxonomy.cdm.api.service.IClassificationService;\r
+import eu.etaxonomy.cdm.api.service.ICollectionService;\r
+import eu.etaxonomy.cdm.api.service.ICommonService;\r
 import eu.etaxonomy.cdm.api.service.IDatabaseService;\r
+import eu.etaxonomy.cdm.api.service.IDescriptionService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureNodeService;\r
+import eu.etaxonomy.cdm.api.service.IFeatureTreeService;\r
+import eu.etaxonomy.cdm.api.service.IGroupService;\r
+import eu.etaxonomy.cdm.api.service.IIdentificationKeyService;\r
+import eu.etaxonomy.cdm.api.service.ILocationService;\r
+import eu.etaxonomy.cdm.api.service.IMediaService;\r
 import eu.etaxonomy.cdm.api.service.INameService;\r
+import eu.etaxonomy.cdm.api.service.IOccurrenceService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyNodeService;\r
+import eu.etaxonomy.cdm.api.service.IPolytomousKeyService;\r
 import eu.etaxonomy.cdm.api.service.IReferenceService;\r
+import eu.etaxonomy.cdm.api.service.IService;\r
+import eu.etaxonomy.cdm.api.service.ITaxonNodeService;\r
 import eu.etaxonomy.cdm.api.service.ITaxonService;\r
 import eu.etaxonomy.cdm.api.service.ITermService;\r
-import eu.etaxonomy.cdm.database.CdmDataSource;\r
+import eu.etaxonomy.cdm.api.service.IUserService;\r
+import eu.etaxonomy.cdm.api.service.IVocabularyService;\r
+import eu.etaxonomy.cdm.api.service.IWorkingSetService;\r
+import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;\r
+import eu.etaxonomy.cdm.common.monitor.NullProgressMonitor;\r
+import eu.etaxonomy.cdm.common.monitor.SubProgressMonitor;\r
+import eu.etaxonomy.cdm.database.CdmPersistentDataSource;\r
 import eu.etaxonomy.cdm.database.DataSourceNotFoundException;\r
-import eu.etaxonomy.cdm.database.CdmDataSource.HBM2DDL;\r
+import eu.etaxonomy.cdm.database.DbSchemaValidation;\r
+import eu.etaxonomy.cdm.database.ICdmDataSource;\r
+import eu.etaxonomy.cdm.model.common.CdmBase;\r
+import eu.etaxonomy.cdm.model.common.CdmMetaData;\r
 import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
-import eu.etaxonomy.cdm.model.common.NoDefinedTermClassException;\r
-import eu.etaxonomy.cdm.model.common.init.TermLoader;\r
+import eu.etaxonomy.cdm.model.common.User;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;\r
+import eu.etaxonomy.cdm.persistence.hibernate.permission.Operation;\r
 \r
 \r
 /**\r
  * @author a.mueller\r
  *\r
  */\r
-public class CdmApplicationController {\r
-       private static final Logger logger = Logger.getLogger(CdmApplicationController.class);\r
-       \r
-       public AbstractApplicationContext applicationContext;\r
-       private INameService nameService;\r
-       private ITaxonService taxonService;\r
-       private IReferenceService referenceService;\r
-       private IAgentService agentService;\r
-       private IDatabaseService databaseService;\r
-       private ITermService termService;\r
-       \r
-       private Server hsqldbServer;\r
-       \r
-       \r
-       /**\r
-        * Constructor, opens an spring 2.5 ApplicationContext by using the default data source\r
-        * @param dataSource\r
-        */\r
-       public CdmApplicationController() {\r
-               logger.info("Start CdmApplicationController with default data source");\r
-               CdmDataSource dataSource = CdmDataSource.NewDefaultInstance();\r
-               HBM2DDL hbm2dll = HBM2DDL.VALIDATE;\r
-               setNewDataSource(dataSource, hbm2dll);\r
-       }\r
-       \r
-       /**\r
-        * Constructor, opens an spring 2.5 ApplicationContext by using the according data source\r
-        * @param dataSource\r
-        */\r
-       public CdmApplicationController(CdmDataSource dataSource) \r
-                       throws DataSourceNotFoundException{\r
-               logger.info("Start CdmApplicationController with datasource: " + dataSource);\r
-               HBM2DDL hbm2dll = HBM2DDL.VALIDATE;\r
-               if (setNewDataSource(dataSource, hbm2dll) == false){\r
-                       throw new DataSourceNotFoundException("Wrong datasource: " + dataSource );\r
-               }\r
-       }\r
-       \r
-       \r
-       /**\r
-        * Constructor, opens an spring 2.5 ApplicationContext by using the according data source\r
-        * @param dataSource\r
-        */\r
-       public CdmApplicationController(CdmDataSource dataSource, HBM2DDL hbm2dll) \r
-                       throws DataSourceNotFoundException{\r
-               logger.info("Start CdmApplicationController with datasource: " + dataSource);\r
-               if (setNewDataSource(dataSource, hbm2dll) == false){\r
-                       throw new DataSourceNotFoundException("Wrong datasource: " + dataSource );\r
-               }\r
-       }\r
-\r
-       \r
-       /**\r
-        * Sets the application context to a new spring ApplicationContext by using the according data source and initializes the Controller.\r
-        * @param dataSource\r
-        */\r
-       private boolean setNewDataSource(CdmDataSource dataSource, HBM2DDL hbm2dll) {\r
-               if (hbm2dll == null){\r
-                       hbm2dll = hbm2dll.VALIDATE;\r
-               }\r
-               logger.info("Connecting to '" + dataSource.getName() + "'");\r
-\r
-\r
-               GenericApplicationContext appContext;\r
-               try {\r
-                       appContext = new GenericApplicationContext();\r
-                       \r
-                       BeanDefinition datasourceBean = dataSource.getDatasourceBean();\r
-                       appContext.registerBeanDefinition("dataSource", datasourceBean);\r
-                       \r
-                       BeanDefinition hibernatePropBean= dataSource.getHibernatePropertiesBean(hbm2dll);\r
-                       appContext.registerBeanDefinition("hibernateProperties", hibernatePropBean);\r
-                       \r
-                       XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(appContext);\r
-                       xmlReader.loadBeanDefinitions(new ClassPathResource("/eu/etaxonomy/cdm/persistence.xml"));               \r
-                       \r
-                       appContext.refresh();\r
-                       appContext.start();\r
-               } catch (BeanCreationException e) {\r
-                       // create new schema\r
-                       if (hbm2dll == HBM2DDL.VALIDATE) {\r
-                               logger.error("ApplicationContext could not be created. " +\r
-                                       " Maybe your database schema is not up-to-date, " +\r
-                                       " but there might be other BeanCreation problems too." +\r
-                                       " Try to run CdmApplicationController with hbm2dll.CREATE or hbm2dll.UPDATE option. ");\r
-                       } else {\r
-                               logger.error("BeanCreationException (CdmApplicationController startet with " + hbm2dll.toString() + " option.");\r
-                       }\r
-                       e.printStackTrace();\r
-                       return false;\r
-//                     logger.warn("Database schema not up-to-date. Schema must be updated. All DefindeTerms are deleted and created new!");\r
-//                     logger.debug("Start spring-2.5 ApplicationContex with hibernate.hbm2ddl.auto 'CREATE' property");\r
-//                     dataSource.updateSessionFactory("create"); \r
-//                     appContext = new EclipseRcpSaveFileSystemXmlApplicationContext(CdmApplicationUtils.getApplicationContextString());              \r
-               }\r
-               setApplicationContext(appContext);\r
-               // load defined terms if necessary \r
-               //TODO not necessary any more\r
-               if (testDefinedTermsAreMissing()){\r
-                       TermLoader termLoader = (TermLoader) appContext.getBean("termLoader");\r
-                       try {\r
-                               termLoader.loadAllDefaultTerms();\r
-                       } catch (FileNotFoundException fileNotFoundException) {\r
-                               logger.error("One or more DefinedTerm initialisation files could not be found");\r
-                               fileNotFoundException.printStackTrace();\r
-                               return false;\r
-                       } catch (NoDefinedTermClassException noDefinedTermClassException) {\r
-                               logger.error("NoDefinedTermClassException");\r
-                               noDefinedTermClassException.printStackTrace();\r
-                               return false;\r
-                       }\r
-               }\r
-               return true;\r
-       }\r
-       \r
-       \r
-       /**\r
-        * Tests if some DefinedTermsAreMissing.\r
-        * @return true, if at least one is missing, else false\r
-        */\r
-       public boolean testDefinedTermsAreMissing(){\r
-               UUID englishUuid = UUID.fromString("e9f8cdb7-6819-44e8-95d3-e2d0690c3523");\r
-               DefinedTermBase english = this.getTermService().getTermByUri(englishUuid.toString());\r
-               if ( english == null || ! english.getUuid().equals(englishUuid)){\r
-                       return true;\r
-               }else{\r
-                       return false;\r
-               }\r
-       }\r
-       \r
-\r
-       /**\r
-        * Changes the ApplicationContext to the new dataSource\r
-        * @param dataSource\r
-        */\r
-       public boolean changeDataSource(CdmDataSource dataSource) {\r
-               logger.info("Change datasource to : " + dataSource);\r
-               return setNewDataSource(dataSource, HBM2DDL.VALIDATE);\r
-       }\r
-       \r
-       /**\r
-        * Changes the ApplicationContext to the new dataSource\r
-        * @param dataSource\r
-        */\r
-       public boolean changeDataSource(CdmDataSource dataSource, HBM2DDL hbm2dll) {\r
-               logger.info("Change datasource to : " + dataSource);\r
-               return setNewDataSource(dataSource, hbm2dll);\r
-       }\r
-       \r
-       /**\r
-        * Sets a new application Context.\r
-        * @param ac\r
-        */\r
-       public void setApplicationContext(AbstractApplicationContext ac){\r
-               closeApplicationContext(); //closes old application context if necessary\r
-               applicationContext = ac;\r
-               applicationContext.registerShutdownHook();\r
-               init();\r
-       }\r
-       \r
-       /* (non-Javadoc)\r
-        * @see java.lang.Object#finalize()\r
-        */\r
-       public void finalize(){\r
-               close();\r
-       }\r
-       \r
-       /**\r
-        * closes the application\r
-        */\r
-       public void close(){\r
-               closeApplicationContext();\r
-       }\r
-       \r
-       /**\r
-        * closes the application context\r
-        */\r
-       private void closeApplicationContext(){\r
-               if (applicationContext != null){\r
-                       logger.info("Close ApplicationContext");\r
-                       applicationContext.close();\r
-               }\r
-       }\r
-       \r
-       private void init(){\r
-               logger.debug("Init " +  this.getClass().getName() + " ... ");\r
-               if (logger.isDebugEnabled()){for (String beanName : applicationContext.getBeanDefinitionNames()){ logger.debug(beanName);}}\r
-               nameService = (INameService)applicationContext.getBean("nameServiceImpl");\r
-               taxonService = (ITaxonService)applicationContext.getBean("taxonServiceImpl");\r
-               referenceService = (IReferenceService)applicationContext.getBean("referenceServiceImpl");\r
-               agentService = (IAgentService)applicationContext.getBean("agentServiceImpl");\r
-               termService = (ITermService)applicationContext.getBean("termServiceImpl");\r
-               databaseService = (IDatabaseService)applicationContext.getBean("databaseServiceHibernateImpl");\r
-               databaseService.setApplicationController(this);\r
-       }\r
-       \r
-\r
-       \r
-       /* ******  Services *********/\r
-       public final INameService getNameService(){\r
-               return this.nameService;\r
-       }\r
-\r
-       public final ITaxonService getTaxonService(){\r
-               return this.taxonService;\r
-       }\r
-\r
-       public final IReferenceService getReferenceService(){\r
-               return this.referenceService;\r
-       }\r
-       \r
-       public final IAgentService getAgentService(){\r
-               return this.agentService;\r
-       }\r
-       \r
-       public final IDatabaseService getDatabaseService(){\r
-               return this.databaseService;\r
-       }\r
-       \r
-       public final ITermService getTermService(){\r
-               return this.termService;\r
-       }\r
-       \r
-       /* **** flush ***********/\r
-       public void flush() {\r
-               SessionFactory sf = (SessionFactory)applicationContext.getBean("sessionFactory");\r
-               sf.getCurrentSession().flush();\r
-       }\r
-               \r
-               \r
-       \r
+public class CdmApplicationController implements ICdmApplicationConfiguration{\r
+    private static final Logger logger = Logger.getLogger(CdmApplicationController.class);\r
+\r
+    public static final String DEFAULT_APPLICATION_CONTEXT_RESOURCE = "/eu/etaxonomy/cdm/defaultApplicationContext.xml";\r
+\r
+    public AbstractApplicationContext applicationContext;\r
+    private ICdmApplicationConfiguration configuration;\r
+    private Resource applicationContextResource;\r
+\r
+    private IProgressMonitor progressMonitor;\r
+\r
+    final protected static DbSchemaValidation defaultDbSchemaValidation = DbSchemaValidation.VALIDATE;\r
+\r
+\r
+\r
+    /**\r
+     * Constructor, opens a spring ApplicationContext by using the default data source\r
+     * @throws DataSourceNotFoundException\r
+     */\r
+    public static CdmApplicationController NewInstance() throws DataSourceNotFoundException {\r
+        logger.info("Start CdmApplicationController with default data source");\r
+        CdmPersistentDataSource dataSource = getDefaultDatasource();\r
+        DbSchemaValidation dbSchemaValidation = defaultDbSchemaValidation;\r
+        return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
+    }\r
+\r
+    /**\r
+     * Constructor, opens a spring ApplicationContext by using the default data source\r
+     * @param dbSchemaValidation validation type for database schema\r
+     * @throws DataSourceNotFoundException\r
+     */\r
+    public static CdmApplicationController NewInstance(DbSchemaValidation dbSchemaValidation) throws DataSourceNotFoundException {\r
+        logger.info("Start CdmApplicationController with default data source");\r
+        CdmPersistentDataSource dataSource = getDefaultDatasource();\r
+        return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
+    }\r
+\r
+\r
+    /**\r
+     * Constructor, opens an spring ApplicationContext by using the according data source and the\r
+     * default database schema validation type\r
+     * @param dataSource\r
+     */\r
+    public static CdmApplicationController NewInstance(ICdmDataSource dataSource) {\r
+        return CdmApplicationController.NewInstance(null, dataSource, defaultDbSchemaValidation, false);\r
+    }\r
+\r
+    public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation) {\r
+        return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, false);\r
+    }\r
+\r
+    public static CdmApplicationController NewInstance(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) {\r
+        return CdmApplicationController.NewInstance(null, dataSource, dbSchemaValidation, omitTermLoading);\r
+    }\r
+\r
+    public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading) {\r
+        return CdmApplicationController.NewInstance(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, null);\r
+    }\r
+\r
+    public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor) {\r
+        return new CdmApplicationController(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, progressMonitor, null);\r
+    }\r
+\r
+    //TODO discuss need for listeners before commit to trunk\r
+//     public static CdmApplicationController NewInstance(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor, List<ApplicationListener> listeners) {\r
+//             return new CdmApplicationController(applicationContextResource, dataSource, dbSchemaValidation, omitTermLoading, progressMonitor,listeners);\r
+//     }\r
+\r
+\r
+    /**\r
+     * @return\r
+     */\r
+    protected static ClassPathResource getClasspathResource() {\r
+        return new ClassPathResource(DEFAULT_APPLICATION_CONTEXT_RESOURCE);\r
+    }\r
+\r
+    /**\r
+     * @return\r
+     * @throws DataSourceNotFoundException\r
+     */\r
+    protected static CdmPersistentDataSource getDefaultDatasource() throws DataSourceNotFoundException {\r
+        CdmPersistentDataSource dataSource = CdmPersistentDataSource.NewDefaultInstance();\r
+        return dataSource;\r
+    }\r
+\r
+\r
+    /**\r
+     * Constructor, opens an spring 2.5 ApplicationContext by using the according data source\r
+     * @param dataSource\r
+     * @param dbSchemaValidation\r
+     * @param omitTermLoading\r
+     */\r
+    protected CdmApplicationController(Resource applicationContextResource, ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, IProgressMonitor progressMonitor, List<ApplicationListener> listeners){\r
+        logger.info("Start CdmApplicationController with datasource: " + dataSource.getName());\r
+\r
+        if (dbSchemaValidation == null){\r
+            dbSchemaValidation = defaultDbSchemaValidation;\r
+        }\r
+        this.applicationContextResource = applicationContextResource != null ? applicationContextResource : getClasspathResource();\r
+        this.progressMonitor = progressMonitor != null ? progressMonitor : new NullProgressMonitor();\r
+\r
+        setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, listeners);\r
+    }\r
+\r
+\r
+    /**\r
+     * Sets the application context to a new spring ApplicationContext by using the according data source and initializes the Controller.\r
+     * @param dataSource\r
+     */\r
+    private boolean setNewDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, List<ApplicationListener> listeners){\r
+\r
+        if (dbSchemaValidation == null){\r
+            dbSchemaValidation = defaultDbSchemaValidation;\r
+        }\r
+        logger.info("Connecting to '" + dataSource.getName() + "'");\r
+\r
+        MonitoredGenericApplicationContext applicationContext =  new MonitoredGenericApplicationContext();\r
+        int refreshTasks = 45;\r
+        int nTasks = 5 + refreshTasks;\r
+//             nTasks += applicationContext.countTasks();\r
+        progressMonitor.beginTask("Connecting to '" + dataSource.getName() + "'", nTasks);\r
+\r
+//             progressMonitor.worked(1);\r
+\r
+        BeanDefinition datasourceBean = dataSource.getDatasourceBean();\r
+        datasourceBean.setAttribute("isLazy", false);\r
+        progressMonitor.subTask("Registering datasource.");\r
+        applicationContext.registerBeanDefinition("dataSource", datasourceBean);\r
+        progressMonitor.worked(1);\r
+\r
+        BeanDefinition hibernatePropBean= dataSource.getHibernatePropertiesBean(dbSchemaValidation);\r
+        applicationContext.registerBeanDefinition("hibernateProperties", hibernatePropBean);\r
+\r
+        XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(applicationContext);\r
+        progressMonitor.subTask("Registering resources.");\r
+        xmlReader.loadBeanDefinitions(applicationContextResource);\r
+        progressMonitor.worked(1);\r
+\r
+        //omitTerms\r
+        if (omitTermLoading == true){\r
+            String initializerName = "persistentTermInitializer";\r
+            BeanDefinition beanDef = applicationContext.getBeanDefinition(initializerName);\r
+            MutablePropertyValues values = beanDef.getPropertyValues();\r
+            values.addPropertyValue("omit", omitTermLoading);\r
+        }\r
+\r
+        if (listeners != null){\r
+            for(ApplicationListener listener : listeners){\r
+                applicationContext.addApplicationListener(listener);\r
+            }\r
+        }\r
+\r
+//             String message = "Start application context. This might take a while ...";\r
+////           progressMonitor.subTask(message);\r
+//             SubProgressMonitor subMonitor= new SubProgressMonitor(progressMonitor, 10);\r
+//             subMonitor.beginTask(message, 2);\r
+//             applicationContext.setProgressMonitor(subMonitor);\r
+\r
+        applicationContext.refresh(new SubProgressMonitor(progressMonitor, refreshTasks));\r
+        applicationContext.start();\r
+//             progressMonitor.worked(1);\r
+\r
+        progressMonitor.subTask("Cleaning up.");\r
+        setApplicationContext(applicationContext);\r
+        progressMonitor.worked(1);\r
+\r
+        //initialize user and metaData for new databases\r
+        int userCount = getUserService().count(User.class);\r
+        if (userCount == 0 ){\r
+            progressMonitor.subTask("Creating Admin User");\r
+            createAdminUser();\r
+        }\r
+        progressMonitor.worked(1);\r
+\r
+        //CDM Meta Data\r
+        int metaDataCount = getCommonService().getCdmMetaData().size();\r
+        if (metaDataCount == 0){\r
+            progressMonitor.subTask("Creating Meta Data");\r
+            createMetadata();\r
+        }\r
+        progressMonitor.worked(1);\r
+\r
+        progressMonitor.done();\r
+        return true;\r
+    }\r
+\r
+    protected void createAdminUser(){\r
+        User firstUser = User.NewInstance("admin", "00000");\r
+        getUserService().save(firstUser);\r
+        logger.info("Admin user created.");\r
+    }\r
+\r
+    protected void createMetadata(){\r
+        List<CdmMetaData> metaData = CdmMetaData.defaultMetaData();\r
+        getCommonService().saveAllMetaData(metaData);\r
+        logger.info("Metadata created.");\r
+    }\r
+\r
+\r
+    /**\r
+     * Tests if some DefinedTermsAreMissing.\r
+     * @return true, if at least one is missing, else false\r
+     */\r
+    public boolean testDefinedTermsAreMissing(){\r
+        UUID englishUuid = UUID.fromString("e9f8cdb7-6819-44e8-95d3-e2d0690c3523");\r
+        DefinedTermBase<?> english = this.getTermService().load(englishUuid);\r
+        if ( english == null || ! english.getUuid().equals(englishUuid)){\r
+            return true;\r
+        }else{\r
+            return false;\r
+        }\r
+    }\r
+\r
+\r
+    /**\r
+     * Changes the ApplicationContext to the new dataSource\r
+     * @param dataSource\r
+     */\r
+    public boolean changeDataSource(ICdmDataSource dataSource){\r
+        //logger.info("Change datasource to : " + dataSource);\r
+        return setNewDataSource(dataSource, DbSchemaValidation.VALIDATE, false, null);\r
+    }\r
+\r
+    /**\r
+     * Changes the ApplicationContext to the new dataSource\r
+     * @param dataSource\r
+     * @param dbSchemaValidation\r
+     */\r
+    public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation){\r
+        //logger.info("Change datasource to : " + dataSource);\r
+        return setNewDataSource(dataSource, dbSchemaValidation, false, null);\r
+    }\r
+\r
+    /**\r
+     * Changes the ApplicationContext to the new dataSource\r
+     * @param dataSource\r
+     * @param dbSchemaValidation\r
+     * @param omitTermLoading\r
+     */\r
+    public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading){\r
+        logger.info("Change datasource to : " + dataSource);\r
+        return setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, null);\r
+    }\r
+\r
+    /**\r
+     * Changes the ApplicationContext to the new dataSource\r
+     * @param dataSource\r
+     * @param dbSchemaValidation\r
+     * @param omitTermLoading\r
+     */\r
+    public boolean changeDataSource(ICdmDataSource dataSource, DbSchemaValidation dbSchemaValidation, boolean omitTermLoading, List<ApplicationListener> listeners){\r
+        logger.info("Change datasource to : " + dataSource);\r
+        return setNewDataSource(dataSource, dbSchemaValidation, omitTermLoading, listeners);\r
+    }\r
+\r
+    /**\r
+     * Sets a new application Context.\r
+     * @param ac\r
+     */\r
+    public void setApplicationContext(AbstractApplicationContext ac){\r
+        closeApplicationContext(); //closes old application context if necessary\r
+        applicationContext = ac;\r
+        applicationContext.registerShutdownHook();\r
+        init();\r
+    }\r
+\r
+    /* (non-Javadoc)\r
+     * @see java.lang.Object#finalize()\r
+     */\r
+    public void finalize(){\r
+        close();\r
+    }\r
+\r
+    /**\r
+     * closes the application\r
+     */\r
+    public void close(){\r
+        closeApplicationContext();\r
+    }\r
+\r
+    /**\r
+     * closes the application context\r
+     */\r
+    protected void closeApplicationContext(){\r
+        if (applicationContext != null){\r
+            logger.info("Close ApplicationContext");\r
+            applicationContext.close();\r
+        }\r
+    }\r
+\r
+    protected void init(){\r
+        logger.debug("Init " +  this.getClass().getName() + " ... ");\r
+        if (logger.isDebugEnabled()){for (String beanName : applicationContext.getBeanDefinitionNames()){ logger.debug(beanName);}}\r
+        //TODO delete next row (was just for testing)\r
+        if (logger.isInfoEnabled()){\r
+            logger.info("Registered Beans: ");\r
+            String[] beanNames = applicationContext.getBeanDefinitionNames();\r
+            for (String beanName : beanNames){\r
+                logger.info(beanName);\r
+            }\r
+        }\r
+        configuration = (ICdmApplicationConfiguration)applicationContext.getBean("cdmApplicationDefaultConfiguration");\r
+        getDatabaseService().setApplicationController(this);\r
+    }\r
+\r
+\r
+\r
+    /* ******  Services *********/\r
+    public final INameService getNameService(){\r
+        return configuration.getNameService();\r
+    }\r
+\r
+    public final ITaxonService getTaxonService(){\r
+        return configuration.getTaxonService();\r
+    }\r
+\r
+    public final IClassificationService getClassificationService(){\r
+        return configuration.getClassificationService();\r
+    }\r
+\r
+    public final ITaxonNodeService getTaxonNodeService(){\r
+        return configuration.getTaxonNodeService();\r
+    }\r
+\r
+    public final IReferenceService getReferenceService(){\r
+        return configuration.getReferenceService();\r
+    }\r
+\r
+    public final IAgentService getAgentService(){\r
+        return configuration.getAgentService();\r
+    }\r
+\r
+    public final IDatabaseService getDatabaseService(){\r
+        return configuration.getDatabaseService();\r
+    }\r
+\r
+    public final ITermService getTermService(){\r
+        return configuration.getTermService();\r
+    }\r
+\r
+    public final IDescriptionService getDescriptionService(){\r
+        return configuration.getDescriptionService();\r
+    }\r
+\r
+    public final IOccurrenceService getOccurrenceService(){\r
+        return configuration.getOccurrenceService();\r
+    }\r
+\r
+    public final IMediaService getMediaService(){\r
+        return configuration.getMediaService();\r
+    }\r
+\r
+    public final ICommonService getCommonService(){\r
+        return configuration.getCommonService();\r
+    }\r
+\r
+    public final ILocationService getLocationService(){\r
+        return configuration.getLocationService();\r
+    }\r
+\r
+    public final IUserService getUserService(){\r
+        return configuration.getUserService();\r
+    }\r
+\r
+    public IGroupService getGroupService() {\r
+        return configuration.getGroupService();\r
+    }\r
+\r
+    public final ICollectionService getCollectionService(){\r
+        return configuration.getCollectionService();\r
+    }\r
+\r
+    public final IFeatureTreeService getFeatureTreeService(){\r
+        return configuration.getFeatureTreeService();\r
+    }\r
+\r
+    public final IFeatureNodeService getFeatureNodeService(){\r
+        return configuration.getFeatureNodeService();\r
+    }\r
+\r
+    public final IVocabularyService getVocabularyService(){\r
+        return configuration.getVocabularyService();\r
+    }\r
+\r
+    public final IIdentificationKeyService getIdentificationKeyService(){\r
+        return configuration.getIdentificationKeyService();\r
+    }\r
+\r
+    public final IPolytomousKeyService getPolytomousKeyService(){\r
+        return configuration.getPolytomousKeyService();\r
+    }\r
+\r
+    public final IPolytomousKeyNodeService getPolytomousKeyNodeService(){\r
+        return configuration.getPolytomousKeyNodeService();\r
+    }\r
+\r
+    public final IService<CdmBase> getMainService(){\r
+        return configuration.getMainService();\r
+    }\r
+\r
+    public final IWorkingSetService getWorkingSetService(){\r
+        return configuration.getWorkingSetService();\r
+    }\r
+\r
+    public final ConversationHolder NewConversation(){\r
+        //return (ConversationHolder)applicationContext.getBean("conversationHolder");\r
+        return configuration.NewConversation();\r
+    }\r
+\r
+\r
+    /* **** Security ***** */\r
+\r
+    /* (non-Javadoc)\r
+     * @see eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration#getAuthenticationManager()\r
+     */\r
+    public final ProviderManager getAuthenticationManager(){\r
+        return configuration.getAuthenticationManager();\r
+    }\r
+\r
+\r
+    public PermissionEvaluator getPermissionEvaluator() {\r
+        return configuration.getPermissionEvaluator();\r
+    }\r
+\r
+    /**\r
+     * @see org.springframework.security.access.PermissionEvaluator#hasPermission(org.springframework.security.core.Authentication, java.lang.Object, java.lang.Object)\r
+     *\r
+     * @param targetDomainObject\r
+     * @param permission\r
+     * @return\r
+     */\r
+    public boolean currentAuthentiationHasPermissions(CdmBase targetDomainObject, EnumSet<CRUD> permission){\r
+        SecurityContext context = SecurityContextHolder.getContext();\r
+        return getPermissionEvaluator().hasPermission(context.getAuthentication(), targetDomainObject, permission);\r
+    }\r
+\r
+\r
+    @Override\r
+    public final PlatformTransactionManager getTransactionManager() {\r
+        return configuration.getTransactionManager();\r
+    }\r
+\r
+    public final Object getBean(String name){\r
+        return this.applicationContext.getBean(name);\r
+    }\r
+\r
+    /*\r
+     * OLD TRANSACTION STUFF\r
+     */\r
+\r
+    /* **** flush ***********/\r
+    public void flush() {\r
+        SessionFactory sf = (SessionFactory)applicationContext.getBean("sessionFactory");\r
+        sf.getCurrentSession().flush();\r
+    }\r
+\r
+    public SessionFactory getSessionFactory(){\r
+        return (SessionFactory)applicationContext.getBean("sessionFactory");\r
+    }\r
+\r
+    public TransactionStatus startTransaction() {\r
+        return startTransaction(false);\r
+    }\r
+\r
+    public TransactionStatus startTransaction(Boolean readOnly) {\r
+        return configuration.startTransaction(readOnly);\r
+    }\r
+\r
+    public void commitTransaction(TransactionStatus txStatus){\r
+        PlatformTransactionManager txManager = configuration.getTransactionManager();\r
+        txManager.commit(txStatus);\r
+        return;\r
+    }\r
+\r
 }\r