- added javadoc

[cdmlib.git] / .gitattributes

diff --git a/.gitattributes b/.gitattributes
index f22c3c5760bf6737f6262ffe9087b49fe6f68e69..e4eda34c20d4a49e4b1b8a8a8c0a4579fcda7e77 100644 (file)
--- a/.gitattributes
+++ b/.gitattributes
@@ -51,6 +51,10 @@ cdmlib-ext/pom.xml -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciSchemaAdapter.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciServiceWrapper.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/IBciServiceWrapper.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQuery.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryGenerator.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryServiceWrapper.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseResponseSchemaAdapter.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/common/SchemaAdapterBase.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/common/ServiceWrapperBase.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/dc/DublinCoreSchemaAdapter.java -text
@@ -75,6 +79,7 @@ cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/scratchpads/ScratchpadsService.jav
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/sru/SruServiceWrapper.java -text
 cdmlib-ext/src/main/resources/eu/etaxonomy/cdm/ext/geo/mapServices_v10.xsd -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/bci/BciServiceTest.java -text
+cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryServiceWrapperTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/geo/EditGeoServiceTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/geo/GeoServiceAreaTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceTest.java -text
@@ -706,6 +711,7 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/NotNullAwareIdBridg
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/PartialBridge.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/SortFieldOptions.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/StripHtmlBridge.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/TaxonRelationshipClassBridge.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/hibernate/search/UuidBridge.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/jaxb/CdmAccessor.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/jaxb/CdmAccessorFactoryImpl.java -text
@@ -739,10 +745,6 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/AnnotatableEntity.java
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/Annotation.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/AnnotationType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmBase.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmMetaData.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmPreference.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmPreferencesPredicateEnum.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/CdmPreferencesSubject.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/Credit.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefaultTermInitializer.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/DefinedTerm.java -text
@@ -869,6 +871,10 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/MovieFile.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/Rights.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/RightsType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/package-info.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/CdmMetaData.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/CdmPreference.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/PreferencePredicate.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/PreferenceSubject.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Amplification.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Cloning.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/DnaSample.java -text
@@ -1134,9 +1140,6 @@ cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/agent/InstitutionalMembershipT
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/agent/TeamTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/AnnotationTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/CdmBaseTest.java -text
-cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/CdmMetaDataTest.java -text
-cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/CdmPreferencesSubjectTest.java -text
-cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/CdmPreferencesTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/DefaultTermInitializerTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/DefinedTermBaseTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/common/ExtensionTypeTest.java -text
@@ -1166,6 +1169,9 @@ cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/location/PointTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/location/TdwgAreaTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/media/MediaTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/media/MediaUtilsTest.java -text
+cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/metadata/CdmMetaDataTest.java -text
+cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/metadata/CdmPreferenceTest.java -text
+cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/metadata/PreferenceSubjectTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/molecular/MolecularTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/BacterialNameTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/model/name/BotanicalNameTest.java -text
@@ -1317,20 +1323,10 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/SchemaU
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/SpecimenMediaMoverUpdater.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/TermUpdater_31_33.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/TermVocabularyRepresentationUpdater.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/AbstractBeanInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/AnnotationTypeAutoInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/AutoPropertyInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/GatheringEventLocationAutoInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/IAlternativeSpellingSuggestionParser.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/IBeanInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/IMethodCache.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/MarkerTypeAutoInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/MediaAutoInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/MethodCacheImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/QueryParseException.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/TermBaseAutoInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/TitleCacheAutoInitializer.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/TypeDesignationAutoInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/agent/IAgentDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/common/AuditEventSort.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/common/IAnnotatableDao.java -text
@@ -1419,6 +1415,16 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxo
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/view/AuditEventDao.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/AbstractBeanInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/AnnotationTypeAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/AutoPropertyInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/GatheringEventLocationAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/IBeanInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/MarkerTypeAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/MediaAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/TermBaseAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/TitleAndNameCacheAutoInitializer.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/TypeDesignationAutoInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaRepresentationDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaRepresentationPartDao.java -text
@@ -1675,6 +1681,8 @@ cdmlib-print/src/main/resources/log4j.properties -text
 cdmlib-print/src/main/resources/stylesheets/mediawiki/functx-1.0-doc-2007-01.xsl -text
 cdmlib-print/src/main/resources/stylesheets/mediawiki/multipages.xsl -text
 cdmlib-print/src/main/resources/stylesheets/odf/cdmToOdfText.xsl -text
+cdmlib-print/src/main/resources/stylesheets/pdf/Untitled21212.xml -text
+cdmlib-print/src/main/resources/stylesheets/pdf/caryophyllales.xsl -text
 cdmlib-print/src/main/resources/stylesheets/pdf/flora-malesiana.xsl -text
 cdmlib-print/src/main/resources/stylesheets/pdf/flore-afrique-centrale.xsl -text
 cdmlib-print/src/site/apt/download.apt -text
@@ -2151,9 +2159,12 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/impl/AbstractPa
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/impl/DefaultPagerImpl.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/impl/StringLabelPagerImpl.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/CdmMassIndexer.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/DocIdBitSetPrinter.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/DocumentSearchResult.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/ICdmMassIndexer.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/ILuceneIndexToolProvider.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/ISearchResultBuilder.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/LuceneIndexToolProviderImpl.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/LuceneMultiSearch.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/LuceneMultiSearchException.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/search/LuceneSearch.java -text
@@ -2191,6 +2202,7 @@ cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeTest.
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/DescriptionServiceImplTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/FeatureNodeServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentificationKeyGeneratorTTT.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/NameServiceImplTest.java -text
@@ -2244,6 +2256,7 @@ cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/facade/DerivedUnitFacade
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/BlankDataSet.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.xml -text
+cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/FeatureNodeServiceImplTest-indexing.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.testUpdateTitleCache-result.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/MediaDaoImplTest.xml -text