add validation framework classes #4439

[cdmlib.git] / .gitattributes

diff --git a/.gitattributes b/.gitattributes
index bb2ef37b93751eb2f0a85e3e6c7b6213042f9a26..d12318a781e9d17d5f9e5a3b4ac52e547f847cdd 100644 (file)
--- a/.gitattributes
+++ b/.gitattributes
@@ -209,6 +209,7 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IDbImportTransformed.
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IDbImportTransformer.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IInputTransformer.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IMappingImport.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IRdfMapper.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/IXmlMapper.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/InputTransformerBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/MultipleAttributeMapperBase.java -text
@@ -442,6 +443,7 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206Import.ja
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206ImportConfigurator.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206ImportState.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206XMLFieldGetter.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Identification.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/ExtensionTypeExcelImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/NamedAreaLevelExcelImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/excel/in/NamedAreaLevellRow.java -text
@@ -476,6 +478,7 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXModsExtractor.java
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXTreatmentExtractor.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXXMLFieldGetter.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmOneToManyXmlMapper.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmSingleAttributeRDFMapperBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmSingleAttributeXmlMapperBase.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmTextElementMapper.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsrdf/CdmUnclearMapper.java -text
@@ -638,7 +641,9 @@ cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/varanusSDD_RatingExample_mo
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/sdd/wrongSDD.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/ABCDImportTestCalvumPart1.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/ABCDImportTestCalvumPart2.xml -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/Campanula_ABCD_import_3_taxa_11_units.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest-input.xml -text
+cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest.doInvoke2.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/abcd206/in/SpecimenImportConfiguratorTest.xml -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelImportConfiguratorTest-input.xls -text
 cdmlib-io/src/test/resources/eu/etaxonomy/cdm/io/specimen/excel/in/ExcelSpecimenImportExampleTest-input.xls -text
@@ -848,6 +853,7 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/PreferencePredicate.j
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/metadata/PreferenceSubject.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Amplification.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Cloning.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/DnaQuality.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/DnaSample.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/PhylogeneticTree.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/molecular/Primer.java -text
@@ -945,10 +951,12 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationship.java -
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/TaxonRelationshipType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/package-info.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/taxon/package.html -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/validation/EntityConstraintViolation.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/validation/EntityValidationResult.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/validation/SeverityType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/AuditEvent.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/AuditEventRecord.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/AuditEventRecordImpl.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/View.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/context/AuditEventContext.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/context/AuditEventContextHolder.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/view/context/AuditEventContextHolderStrategy.java -text
@@ -1026,8 +1034,10 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/SpecimenTypeParser.j
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/TaxonNameParserHistory.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/TimePeriodParser.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/parser/location/CoordinateConverter.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/CRUDEventType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/Level2.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/Level3.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/Severity.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/ValidationException.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/annotation/BasionymsMustShareEpithetsAndAuthors.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/validation/annotation/ChildTaxaMustBeLowerRankThanParent.java -text
@@ -1069,6 +1079,7 @@ cdmlib-model/src/main/resources/terms/ExtensionType.csv -text
 cdmlib-model/src/main/resources/terms/Feature.csv -text
 cdmlib-model/src/main/resources/terms/FormerCountries -text
 cdmlib-model/src/main/resources/terms/HybridRelationshipType.csv -text
+cdmlib-model/src/main/resources/terms/IdentifierType.csv -text
 cdmlib-model/src/main/resources/terms/InstitutionType.csv -text
 cdmlib-model/src/main/resources/terms/Language.csv -text
 cdmlib-model/src/main/resources/terms/MarkerType.csv -text
@@ -1562,6 +1573,7 @@ cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibenate/permissio
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CacheStrategyGeneratorTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CdmDeleteListenerTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/replace/ReferringObjectMetadataFactoryTest.java -text
+cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/profiler/ProfileController.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/profiler/ProfilerController.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/test/function/Datasource.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/test/function/TestCdmApplicationUtils.java -text
@@ -2075,6 +2087,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/MetadataController.j
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/Utils.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/VaadinConfigurer.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/VaadinUI.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/ClassificationSelectionForm.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/DemoTaxonTable.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/DetailWindow.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/HorizontalToolbar.java -text
@@ -2083,6 +2096,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/TaxonTable
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/service/AuthenticationService.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/disabled/DefaultView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/BfnView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/ClassificationSelectorView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/DashBoardView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/ErrorView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/LoginView.java -text
@@ -2346,6 +2360,7 @@ cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/CommonServiceImplTest
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/DescriptionServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/FeatureNodeServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/GroupServiceImplTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/HandlingCdmEntitiesTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentificationKeyGeneratorTTT.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/NameServiceImplTest.java -text
@@ -2409,6 +2424,7 @@ cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/BlankDataSet.xml
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/FeatureNodeServiceImplTest-indexing.xml -text
+cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/HandlingCdmEntitiesTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.testUpdateTitleCache-result.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/MediaDaoImplTest.xml -text