-/**\r
-* Copyright (C) 2009 EDIT\r
-* European Distributed Institute of Taxonomy\r
-* http://www.e-taxonomy.eu\r
-*\r
-* The contents of this file are subject to the Mozilla Public License Version 1.1\r
-* See LICENSE.TXT at the top of this package for the full license terms.\r
-*/ \r
-\r
-package eu.etaxonomy.cdm.api.service;\r
-\r
-import java.util.ArrayList;\r
-import java.util.List;\r
-import java.util.UUID;\r
-\r
-import org.springframework.beans.factory.annotation.Autowired;\r
-import org.springframework.stereotype.Service;\r
-import org.springframework.transaction.annotation.Propagation;\r
-import org.springframework.transaction.annotation.Transactional;\r
-\r
-import eu.etaxonomy.cdm.api.service.pager.Pager;\r
-import eu.etaxonomy.cdm.api.service.pager.impl.DefaultPagerImpl;\r
-import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;\r
-import eu.etaxonomy.cdm.model.common.DefinedTermBase;\r
-import eu.etaxonomy.cdm.model.common.Language;\r
-import eu.etaxonomy.cdm.model.common.TermType;\r
-import eu.etaxonomy.cdm.model.common.TermVocabulary;\r
-import eu.etaxonomy.cdm.model.common.VocabularyEnum;\r
-import eu.etaxonomy.cdm.persistence.dao.common.ITermVocabularyDao;\r
-import eu.etaxonomy.cdm.persistence.query.OrderHint;\r
-import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;\r
-\r
-@Service\r
-@Transactional(readOnly = true)\r
-public class VocabularyServiceImpl extends IdentifiableServiceBase<TermVocabulary,ITermVocabularyDao> implements IVocabularyService {\r
-\r
- @Autowired\r
- protected void setDao(ITermVocabularyDao dao) {\r
- this.dao = dao;\r
- }\r
-\r
-\r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy)\r
- */\r
- @Override\r
- @Transactional(readOnly = false)\r
- public void updateTitleCache(Class<? extends TermVocabulary> clazz, Integer stepSize, IIdentifiableEntityCacheStrategy<TermVocabulary> cacheStrategy, IProgressMonitor monitor) {\r
- if (clazz == null){\r
- clazz = TermVocabulary.class;\r
- }\r
- super.updateTitleCacheImpl(clazz, stepSize, cacheStrategy, monitor);\r
- }\r
-\r
- \r
- public TermVocabulary<DefinedTermBase> getVocabulary(VocabularyEnum vocabularyType){\r
- return dao.findByUuid(vocabularyType.getUuid());\r
- }\r
- \r
- /* (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.service.IVocabularyService#listByTermClass(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)\r
- */\r
- @Override\r
- public <TERM extends DefinedTermBase> List<TermVocabulary<TERM>> listByTermClass(Class<TERM> clazz, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {\r
- boolean includeSubclasses = false;\r
- boolean includeEmptyVocs = false;\r
- return (List)listByTermClass(clazz, includeSubclasses, includeEmptyVocs, limit, start, orderHints, propertyPaths);\r
- } \r
-\r
- public <TERM extends DefinedTermBase> List<TermVocabulary<? extends TERM>> listByTermClass(Class<TERM> clazz, boolean includeSubclasses, boolean includeEmptyVocs, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {\r
- return dao.listByTermClass(clazz, includeSubclasses, includeEmptyVocs,limit, start, orderHints, propertyPaths);\r
- }\r
- \r
- public <T extends DefinedTermBase> List<TermVocabulary<T>> findByTermType(TermType termType) {\r
- return dao.findByTermType(termType);\r
- }\r
- /** \r
- * (non-Javadoc)\r
- * @see eu.etaxonomy.cdm.api.service.ITermService#getLanguageVocabulary()\r
- * FIXME candidate for harmonization\r
- * is this the same as getVocabulary(VocabularyEnum.Language)\r
- */\r
- public TermVocabulary<Language> getLanguageVocabulary() {\r
- String uuidString = "45ac7043-7f5e-4f37-92f2-3874aaaef2de";\r
- UUID uuid = UUID.fromString(uuidString);\r
- TermVocabulary<Language> languageVocabulary = (TermVocabulary)dao.findByUuid(uuid);\r
- return languageVocabulary;\r
- }\r
-\r
- public Pager<DefinedTermBase> getTerms(TermVocabulary vocabulary, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {\r
- Integer numberOfResults = dao.countTerms(vocabulary);\r
- \r
- List<DefinedTermBase> results = new ArrayList<DefinedTermBase>();\r
- if(numberOfResults > 0) { // no point checking again //TODO use AbstractPagerImpl.hasResultsInRange(numberOfResults, pageNumber, pageSize)\r
- results = dao.getTerms(vocabulary, pageSize, pageNumber,orderHints,propertyPaths); \r
- }\r
- \r
- return new DefaultPagerImpl<DefinedTermBase>(pageNumber, numberOfResults, pageSize, results);\r
- }\r
-\r
-\r
-\r
-}\r
+/**
+* Copyright (C) 2009 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.cdm.api.service;
+
+import java.util.ArrayList;
+import java.util.Collection;
+import java.util.List;
+import java.util.UUID;
+
+import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.stereotype.Service;
+import org.springframework.transaction.annotation.Transactional;
+
+import eu.etaxonomy.cdm.api.service.pager.Pager;
+import eu.etaxonomy.cdm.api.service.pager.impl.DefaultPagerImpl;
+import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;
+import eu.etaxonomy.cdm.model.common.Language;
+import eu.etaxonomy.cdm.model.term.DefinedTermBase;
+import eu.etaxonomy.cdm.model.term.TermType;
+import eu.etaxonomy.cdm.model.term.TermVocabulary;
+import eu.etaxonomy.cdm.persistence.dao.term.ITermVocabularyDao;
+import eu.etaxonomy.cdm.persistence.dto.TermDto;
+import eu.etaxonomy.cdm.persistence.dto.TermVocabularyDto;
+import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;
+import eu.etaxonomy.cdm.persistence.query.OrderHint;
+import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;
+
+@Service
+@Transactional(readOnly = true)
+public class VocabularyServiceImpl extends IdentifiableServiceBase<TermVocabulary,ITermVocabularyDao> implements IVocabularyService {
+
+ @Autowired
+ private ITermService termService;
+
+ @Override
+ @Autowired
+ protected void setDao(ITermVocabularyDao dao) {
+ this.dao = dao;
+ }
+
+
+ @Override
+ @Transactional(readOnly = false)
+ public UpdateResult updateCaches(Class<? extends TermVocabulary> clazz, Integer stepSize, IIdentifiableEntityCacheStrategy<TermVocabulary> cacheStrategy, IProgressMonitor monitor) {
+ if (clazz == null){
+ clazz = TermVocabulary.class;
+ }
+ return super.updateCachesImpl(clazz, stepSize, cacheStrategy, monitor);
+ }
+
+
+ @Override
+ public List<TermVocabulary> listByTermType(TermType termType, boolean includeSubTypes,
+ Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {
+ return dao.listByTermType(termType, includeSubTypes, limit, start, orderHints, propertyPaths);
+ }
+
+ @Override
+ public <T extends DefinedTermBase> List<TermVocabulary<T>> findByTermType(TermType termType, List<String> propertyPaths) {
+ return dao.findByTermType(termType, propertyPaths);
+ }
+ /**
+ * (non-Javadoc)
+ * @see eu.etaxonomy.cdm.api.service.ITermService#getLanguageVocabulary()
+ * FIXME candidate for harmonization
+ * is this the same as getVocabulary(VocabularyEnum.Language)
+ */
+ @Override
+ public TermVocabulary<Language> getLanguageVocabulary() {
+ String uuidString = "45ac7043-7f5e-4f37-92f2-3874aaaef2de";
+ UUID uuid = UUID.fromString(uuidString);
+ TermVocabulary<Language> languageVocabulary = dao.findByUuid(uuid);
+ return languageVocabulary;
+ }
+
+ @Override
+ public Pager<DefinedTermBase> getTerms(TermVocabulary vocabulary, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {
+ long numberOfResults = dao.countTerms(vocabulary);
+
+ List<DefinedTermBase> results = new ArrayList<>();
+ if(numberOfResults > 0) { // no point checking again //TODO use AbstractPagerImpl.hasResultsInRange(numberOfResults, pageNumber, pageSize)
+ results = dao.getTerms(vocabulary, pageSize, pageNumber,orderHints,propertyPaths);
+ }
+
+ return new DefaultPagerImpl<>(pageNumber, numberOfResults, pageSize, results);
+ }
+
+
+ @Override
+ public Collection<TermDto> getTopLevelTerms(UUID vocabularyUuid) {
+ return dao.getTopLevelTerms(vocabularyUuid);
+ }
+
+ @Override
+ public Collection<TermDto> getCompleteTermHierarchy(UUID vocabularyUuid) {
+ Collection<TermDto> topLevelTerms = dao.getTopLevelTerms(vocabularyUuid);
+ for (TermDto termDto : topLevelTerms) {
+ initializeIncludes(termDto);
+ initializeGeneralizationOf(termDto);
+ }
+ return topLevelTerms;
+ }
+
+ private void initializeGeneralizationOf(TermDto parentTerm){
+ Collection<TermDto> generalizationOf = termService.getKindOfsAsDto(parentTerm);
+ parentTerm.setGeneralizationOf(generalizationOf);
+ generalizationOf.forEach(generalization->{
+ generalization.setKindOfDto(parentTerm);
+ initializeGeneralizationOf(generalization);
+ });
+ }
+
+ private void initializeIncludes(TermDto parentTerm){
+ Collection<TermDto> includes = termService.getIncludesAsDto(parentTerm);
+ parentTerm.setIncludes(includes);
+ includes.forEach(include->{
+ initializeIncludes(include);
+ include.setPartOfDto(parentTerm);
+ });
+ }
+
+ @Override
+ public List<TermVocabularyDto> findVocabularyDtoByTermType(TermType termType) {
+ return dao.findVocabularyDtoByTermType(termType);
+ }
+
+ @Transactional(readOnly = false)
+ @Override
+ public TermDto addNewTerm(TermType termType, UUID vocabularyUUID) {
+ DefinedTermBase term = termType.getEmptyDefinedTermBase();
+ termService.save(term);
+ TermVocabulary vocabulary = dao.load(vocabularyUUID);
+ vocabulary.addTerm(term);
+ dao.saveOrUpdate(vocabulary);
+ return TermDto.fromTerm(term, true);
+ }
+
+ @Override
+ public <S extends TermVocabulary> List<UuidAndTitleCache<S>> getUuidAndTitleCache(Class<S> clazz, TermType termType,
+ Integer limit, String pattern) {
+ return dao.getUuidAndTitleCache(clazz, termType, limit, pattern);
+ }
+}