merge-update from trunk
[cdmlib.git] / .gitattributes
index 04f401293835de54c67ef915e3e84fb61f78eb2e..e013819c7d459dde349b8924c6ab5586649e9c59 100644 (file)
@@ -51,10 +51,6 @@ cdmlib-ext/pom.xml -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciSchemaAdapter.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/BciServiceWrapper.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/bci/IBciServiceWrapper.java -text
-cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQuery.java -text
-cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryGenerator.java -text
-cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryServiceWrapper.java -text
-cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/biocase/BioCaseResponseSchemaAdapter.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/common/SchemaAdapterBase.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/common/ServiceWrapperBase.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/dc/DublinCoreSchemaAdapter.java -text
@@ -72,6 +68,15 @@ cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceAuthorConfigurator
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceConfiguratorBase.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceNamesConfigurator.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/ipni/IpniServicePublicationConfigurator.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/OccurenceQuery.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/bioCase/BioCaseQueryGenerator.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/bioCase/BioCaseQueryServiceWrapper.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/DataSetResponse.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifDataSetProtocol.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifJsonOccurrenceParser.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifQueryGenerator.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifQueryServiceWrapper.java -text
+cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifResponse.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/openurl/MobotOpenUrlQuery.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/openurl/MobotOpenUrlResponseSchemaAdapter.java -text
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/openurl/MobotOpenUrlServiceWrapper.java -text
@@ -80,10 +85,11 @@ cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/scratchpads/ScratchpadsService.jav
 cdmlib-ext/src/main/java/eu/etaxonomy/cdm/ext/sru/SruServiceWrapper.java -text
 cdmlib-ext/src/main/resources/eu/etaxonomy/cdm/ext/geo/mapServices_v10.xsd -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/bci/BciServiceTest.java -text
-cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/biocase/BioCaseQueryServiceWrapperTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/geo/EditGeoServiceTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/geo/GeoServiceAreaTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/ipni/IpniServiceTest.java -text
+cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/occurrence/bioCase/BioCaseQueryServiceWrapperTest.java -text
+cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/occurrence/gbif/GbifQueryServiceWrapperTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/openurl/MobotOpenUrlServiceWrapperTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/ext/sru/SruServiceWrapperTest.java -text
 cdmlib-ext/src/test/java/eu/etaxonomy/cdm/test/suite/CdmTestSuite.java -text
@@ -252,6 +258,16 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/out/IdMapper.java -te
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/out/IndexCounter.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/out/MethodMapper.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/common/mapping/out/ObjectChangeMapper.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoExport.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoExportConfigurator.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoExportState.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoExportTransformer.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoId.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoMetaDataRecord.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoRecord.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/CsvDemoRecordBase.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/demo/ICsvAreaRecord.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/out/CsvExportBaseRedlist.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/out/CsvId.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/csv/redlist/out/CsvMetaDataRecordRedlist.java -text
@@ -450,6 +466,7 @@ cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXImportState.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXModsImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXNomenclatureImport.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx/TaxonXTransformer.java -text
+cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXAddSources.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXDataHolder.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXExtractor.java -text
 cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/taxonx2013/TaxonXImport.java -text
@@ -717,6 +734,7 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IMultiLanguageText.java
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IMultiLanguageTextHolder.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IOriginalSource.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IParsable.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IPublishable.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IReferencedEntity.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/IRelated.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/common/ISimpleTerm.java -text
@@ -773,6 +791,7 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Distribution.java
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/Feature.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/FeatureNode.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/FeatureTree.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/IDescribable.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/IIdentificationKey.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/IModifiable.java -text svneol=unset#text/plain
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/description/IndividualsAssociation.java -text
@@ -805,7 +824,6 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/NamedAreaLevel.java -
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/NamedAreaType.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/Point.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/ReferenceSystem.java -text
-cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/TdwgArea_Old.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/package-info.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/location/package.html -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/model/media/AudioFile.java -text
@@ -973,6 +991,7 @@ cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/InRefDefaul
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/JournalDefaultCacheStrategy.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/NomRefDefaultCacheStrategyBase.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ReferenceDefaultCacheStrategy.java -text
+cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/SectionDefaultCacheStrategy.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/reference/ThesisDefaultCacheStrategy.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/cache/taxon/TaxonBaseDefaultCacheStrategy.java -text
 cdmlib-model/src/main/java/eu/etaxonomy/cdm/strategy/exceptions/StringNotParsableException.java -text
@@ -1044,6 +1063,7 @@ cdmlib-model/src/main/resources/terms/DnaMarkerChloroplast.csv -text
 cdmlib-model/src/main/resources/terms/DnaMarkerEukaryote.csv -text
 cdmlib-model/src/main/resources/terms/ExtensionType.csv -text
 cdmlib-model/src/main/resources/terms/Feature.csv -text
+cdmlib-model/src/main/resources/terms/FormerCountries -text
 cdmlib-model/src/main/resources/terms/HybridRelationshipType.csv -text
 cdmlib-model/src/main/resources/terms/InstitutionType.csv -text
 cdmlib-model/src/main/resources/terms/Language.csv -text
@@ -1059,6 +1079,7 @@ cdmlib-model/src/main/resources/terms/NamedAreaType.csv -text
 cdmlib-model/src/main/resources/terms/NaturalLanguageTerm.csv -text
 cdmlib-model/src/main/resources/terms/NomenclaturalCode.csv -text
 cdmlib-model/src/main/resources/terms/NomenclaturalStatusType.csv -text
+cdmlib-model/src/main/resources/terms/NomenclaturalStatusTypeIczn.csv -text
 cdmlib-model/src/main/resources/terms/PlantKindOfUnit.csv -text
 cdmlib-model/src/main/resources/terms/PresenceTerm.csv -text
 cdmlib-model/src/main/resources/terms/PreservationMethod.csv -text
@@ -1150,6 +1171,7 @@ cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/common/TermDefaultCac
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/description/TaxonDescriptionDefaultCacheStrategyTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/media/MediaDefaultCacheStrategyTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/BotanicNameCacheStrategyTest.java -text
+cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/NameCacheStrategyTestBase.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/NonViralNameDefaultCacheStrategyTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/ZooNameNoMarkerCacheStrategyTest.java -text
 cdmlib-model/src/test/java/eu/etaxonomy/cdm/strategy/cache/name/ZoologicalNameCacheStrategyTest.java -text
@@ -1187,7 +1209,13 @@ cdmlib-persistence/LICENSE.TXT -text
 cdmlib-persistence/README.TXT -text
 cdmlib-persistence/pom.xml -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/api/application/CdmApplicationUtils.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/CdmPersistentSourceUtils.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/CdmPersistentXMLSource.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/CdmSource.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/CdmSourceException.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/Configuration.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/ICdmPersistentSource.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/config/ICdmSource.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/CdmDataSource.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/CdmDataSourceBase.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/CdmPersistentDataSource.java -text
@@ -1198,7 +1226,6 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/DataSourceReloader.ja
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/DatabaseSchemaMismatchException.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/DatabaseTypeEnum.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/DbSchemaValidation.java -text
-cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/EvaluationFailedException.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/H2DbSupport.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/H2Mode.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/ICdmDataSource.java -text
@@ -1206,6 +1233,7 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/LocalH2.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/LocalHsqldb.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/NamedContextHolder.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/NomenclaturalCodeAwareDataSource.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/PermissionDeniedException.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/PersistentTermInitializer.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/UpdatableRoutingDataSource.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/types/DatabaseTypeBase.java -text
@@ -1222,6 +1250,7 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/types/SqlServer2005Da
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/types/SqlServer2008DatabaseType.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/types/SybaseDatabaseType.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/AuditedSchemaUpdaterStepBase.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/CaseType.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/CdmUpdater.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ClassChanger.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/ColumnAdder.java -text
@@ -1253,6 +1282,7 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/UniqueIndexDro
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/UpdaterBase.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/VocabularyCreator.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/permissions/PermissionsUpdater.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/test/ValidateForeignKeys.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v24_25/SchemaUpdater_24_25.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v24_25/TermUpdater_24_25.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v25_30/FeatureNodeTreeColumnUpdater.java -text
@@ -1268,11 +1298,15 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v30_31/TermUpd
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v30_31/TermUpdater_313_314.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v30_31/TermUpdater_314_315.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v30_31/TermUpdater_31_311.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/ClassificationRootNodeUpdater.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/RankClassUpdater.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/SchemaUpdater_31_33.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/SchemaUpdater_33_331.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/SpecimenMediaMoverUpdater.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/TermUpdater_31_33.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v31_33/TermVocabularyRepresentationUpdater.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v33_34/SchemaUpdater_331_34.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/database/update/v33_34/TermUpdater_33_34.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/IAlternativeSpellingSuggestionParser.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/IMethodCache.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/MethodCacheImpl.java -text
@@ -1352,6 +1386,9 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/desc
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaRepresentationHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/media/MediaRepresentationPartHibernateImpl.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/molecular/AmplificationDaoHibernateImpl.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/molecular/PrimerDaoHibernateImpl.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/molecular/SequenceDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/name/HomotypicalGroupDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/name/NomenclaturalStatusDaoHibernateImpl.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/hibernate/name/TaxonNameDaoHibernateImpl.java -text
@@ -1380,6 +1417,9 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/initializer/Ty
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaRepresentationDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/media/IMediaRepresentationPartDao.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/molecular/IAmplificationDao.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/molecular/IPrimerDao.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/molecular/ISequenceDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/name/IHomotypicalGroupDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/name/INomenclaturalStatusDao.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/dao/name/ITaxonNameDao.java -text
@@ -1411,16 +1451,21 @@ cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permissi
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/CdmAuthority.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/CdmPermissionClass.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/CdmPermissionEvaluator.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/ICdmPermissionEvaluator.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/IGrantedAuthorityConverter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/Operation.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/Role.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/SecurityExceptionUtils.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/UnanimousBasedUnrevokable.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/CdmPermissionVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/DescriptionBaseVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/DescriptionElementVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/GrantAlwaysVoter.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/ReferenceVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/TaxonBaseVoter.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/TaxonNameBaseVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/TaxonNodeVoter.java -text
+cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/permission/voter/TeamOrPersonBaseVoter.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/replace/ReferringObjectMetadata.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/replace/ReferringObjectMetadataFactory.java -text
 cdmlib-persistence/src/main/java/eu/etaxonomy/cdm/persistence/hibernate/replace/impl/ListReferringObjectMetadata.java -text
@@ -1466,6 +1511,7 @@ cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/types/SqlServer2000Da
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/types/SqlServer2005DatabaseTypeTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/types/SybaseDatabaseTypeTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/database/update/CdmUpdaterTest.java -text
+cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/datagenerator/FullCoverageDataGenerator.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/datagenerator/TaxonGenerator.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/BeanInitializerIntegration.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/MethodCacheImplTest.java -text
@@ -1502,6 +1548,7 @@ cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxo
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/taxon/TaxonNodeDaoHibernateImplTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/view/AuditEventDaoTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibenate/permission/CdmAuthorityTest.java -text
+cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibenate/permission/CdmPermissionClassTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CacheStrategyGeneratorTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/CdmDeleteListenerTest.java -text
 cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/hibernate/replace/ReferringObjectMetadataFactoryTest.java -text
@@ -1664,9 +1711,68 @@ cdmlib-remote-webapp/LICENSE.TXT -text
 cdmlib-remote-webapp/README.TXT -text
 cdmlib-remote-webapp/ide/eclipse/cdmlib-remote[!!-~]-[!!-~]remote[!!-~]debug[!!-~]8000.launch -text
 cdmlib-remote-webapp/ide/eclipse/cdmlib-remote-webapp[!!-~]-[!!-~]profile.launch -text
-cdmlib-remote-webapp/ide/eclipse/cdmlib-remote-webapp[!!-~]-[!!-~]run.launch -text svneol=unset#application/xml
+cdmlib-remote-webapp/ide/eclipse/cdmlib-remote-webapp[!!-~]-[!!-~]run.launch -text
 cdmlib-remote-webapp/pom.xml -text
 cdmlib-remote-webapp/src/main/resources/log4j.properties -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/favicon.ico -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/Thumbs.db -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/VLineSeparator.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/arrow-down.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/arrow-left.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/arrow-right.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/arrow-up.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/attention.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/bg-column.jpg -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/bg-right-column.jpg -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/bottom-left.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/bottom-right.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/calendar.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/cancel.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-add.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-delete.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-doc.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-edit.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-image.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-pdf.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-ppt.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-save.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-txt.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-web.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document-xsl.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/document.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/email-reply.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/email-send.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/email.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/folder-add.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/folder-delete.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/folder.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/globe.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/help.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/lock.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/loginpanel.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/note.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/ok.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/reload.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/settings.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/top-left.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/top-right.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/trash-full.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/trash.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/user.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/users.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/vseparator.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/32/vseparator1.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/OSStack.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/arrow-down.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/arrow-up.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/red_nose_reindeer.jpg -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/reindeer.jpg -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/icons/wizard/vaadin.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/images/document-edit.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/images/gradient.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/images/logo.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/images/table-header-bg.png -text
+cdmlib-remote-webapp/src/main/webapp/VAADIN/themes/mytheme/styles.css -text
 cdmlib-remote-webapp/src/main/webapp/WEB-INF/applicationContext.views.xml -text
 cdmlib-remote-webapp/src/main/webapp/WEB-INF/applicationContext.xml -text
 cdmlib-remote-webapp/src/main/webapp/WEB-INF/cdmlib-remote-servlet.xml -text
@@ -1711,7 +1817,15 @@ cdmlib-remote-webapp/src/main/webapp/xsl/name.xsl -text
 cdmlib-remote-webapp/src/main/webapp/xsl/oai2.xsl -text
 cdmlib-remote-webapp/src/main/webapp/xsl/statistics.xsl -text
 cdmlib-remote-webapp/src/main/webapp/xsl/taxon.xsl -text
-cdmlib-remote-webapp/src/test/java/eu/etaxonomy/AppTest.java -text
+cdmlib-remote-webapp/src/test/java/eu/etaxonomy/cdm/remote/ClassificationIT.java -text
+cdmlib-remote-webapp/src/test/resources/datasources.xml -text
+cdmlib-remote-webapp/src/test/resources/etc/jetty/jetty-http.xml -text
+cdmlib-remote-webapp/src/test/resources/etc/jetty/jetty-https.xml -text
+cdmlib-remote-webapp/src/test/resources/etc/jetty/jetty-ssl.xml -text
+cdmlib-remote-webapp/src/test/resources/etc/jetty/jetty.xml -text
+cdmlib-remote-webapp/src/test/resources/h2/cdmTest.h2.db -text svneol=unset#unset
+cdmlib-remote-webapp/src/test/resources/log4j.properties -text
+cdmlib-remote/.springBeans -text
 cdmlib-remote/LICENSE.TXT -text
 cdmlib-remote/README.TXT -text
 cdmlib-remote/pom.xml -text
@@ -1779,8 +1893,10 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TermController.ja
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/TermListController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/VocabularyController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/VocabularyListController.java -text
-cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/csv/CsvExportController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/checklist/ChecklistDemoController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/checklist/CsvExportController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/dto/NameCatalogueController.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/dto/OccurrenceCatalogueController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/dto/PolytomousKeyNodeDtoController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ext/ExternalBhleController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/controller/ext/ExternalGeoController.java -text
@@ -1843,6 +1959,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/SetSpec.java -tex
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/Status.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/Verb.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/oaipmh/package-info.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/occurrencecatalogue/OccurrenceSearch.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/package.html -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/polytomouskey/AbstractLinkDto.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/polytomouskey/LinkedPolytomousKeyNodeRowDto.java -text
@@ -1868,6 +1985,7 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/TaxonConcept.ja
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/TaxonName.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/TaxonRelationshipTerm.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/tdwg/voc/Team.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/dto/vaadin/CdmTaxonTableCollection.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/CdmTypePropertyEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/DateTimeEditor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/editor/DefinedTermBaseList.java -text
@@ -1894,15 +2012,19 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/JsonpRedirect.java -tex
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/CdmBeanProcessingRegistry.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/AbstractBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/AbstractCdmBeanProcessor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/AbstractModifiableThingBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/DefaultBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/DerivedUnitFacadeBeanProcessor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/DescriptionElementBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/HibernateProxyBeanProcessor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/IMultilanguageTextBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/KeyStatementBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/LuceneDocumentBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/MediaBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/NameRelationshipBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/PointBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/ReferenceBaseBeanProcessor.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/StateDataBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonNameBaseBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonNameDescriptionBeanProcessor.java -text
@@ -1911,7 +2033,6 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonNod
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TaxonRelationshipBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TeamOrPersonBaseBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TermBaseBeanProcessor.java -text
-cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TextDataBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TreeNodeBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/bean/TypeDesignationBaseBeanProcessor.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/json/processor/matcher/CGLibEnhancedBeanProcessorMatcher.java -text
@@ -1935,7 +2056,23 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/CdmObjectNonExisting
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/DataController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/MetadataController.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/service/Utils.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/VaadinConfigurer.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/VaadinUI.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/DemoTaxonTable.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/DetailWindow.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/HorizontalToolbar.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/LoginForm.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/components/TaxonTableDTO.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/service/AuthenticationService.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/disabled/DefaultView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/BfnView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/DashBoardView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/ErrorView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/uiset/redlist/views/LoginView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/vaadin/widgetset/AppWidgetSet.gwt.xml -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/BaseView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/CsvFileDownloadView.java -text
+cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/FileDownloadView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/HtmlView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/JsonView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/OaiPmhResponseView.java -text
@@ -1957,6 +2094,8 @@ cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/oaipmh/rdf/GetRecordVie
 cdmlib-remote/src/main/java/eu/etaxonomy/cdm/remote/view/oaipmh/rdf/ListRecordsView.java -text
 cdmlib-remote/src/main/java/eu/etaxonomy/remote/dto/rdf/Rdf.java -text
 cdmlib-remote/src/main/java/net/sf/json/CycleSetAcess.java -text
+cdmlib-remote/src/main/java/ru/xpoft/vaadin/CdmDiscoveryNavigator.java -text
+cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote-security.xml -text
 cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote.xml -text
 cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/dwc/mappings.xml -text
 cdmlib-remote/src/main/resources/eu/etaxonomy/cdm/remote/dto/oaipmh/mappings.xml -text
@@ -1971,6 +2110,7 @@ cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/dto/assembler/lsid/Assembler
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/service/AuthorityControllerTest.java -text
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/service/DataControllerTest.java -text
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/service/MetadataControllerTest.java -text
+cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/view/JsonToCsvViewTest.java -text
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/view/OaiPmhViewTest.java -text
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/remote/view/RdfViewTest.java -text
 cdmlib-remote/src/test/java/eu/etaxonomy/cdm/test/function/GenericRemoteTester.java -text
@@ -1995,6 +2135,7 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/ICdmApplicationCo
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/MonitoredGenericApplicationContext.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/application/MonitoredListableBeanFactory.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/conversation/ConversationHolder.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/conversation/ConversationHolderMock.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/conversation/IConversationEnabled.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacade.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategy.java -text
@@ -2092,6 +2233,7 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IFindTaxaAndNa
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IIdentifiableEntityServiceConfigurator.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IdentifiableServiceConfiguratorFactory.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IdentifiableServiceConfiguratorImpl.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/IncludedTaxonConfiguration.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/MatchingTaxonConfigurator.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/NameDeletionConfigurator.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/SynonymDeletionConfigurator.java -text
@@ -2100,6 +2242,8 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/TaxonDeletionC
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/TaxonNodeDeletionConfigurator.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/config/TermDeletionConfigurator.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/description/TransmissionEngineDistribution.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/dto/DistributionInfoDTO.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/dto/IncludedTaxaDTO.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/exception/DataChangeNoRollbackException.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/exception/HomotypicalGroupChangeException.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/exception/ReferencedObjectUndeletableException.java -text
@@ -2119,6 +2263,12 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/lsid/impl/LsidWsdlWra
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/lsid/impl/LsidWsdlWrapperImpl.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/lsid/impl/Pattern.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/lsid/impl/TaxonMetadataMapper.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/AmplificationServiceImpl.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/IAmplificationService.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/IPrimerService.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/ISequenceService.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/PrimerServiceImpl.java -text
+cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/molecular/SequenceServiceImpl.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/Pager.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/PagerUtils.java -text
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/service/pager/impl/AbstractPagerImpl.java -text
@@ -2149,6 +2299,8 @@ cdmlib-services/src/main/java/eu/etaxonomy/cdm/api/utility/ImagesUtility.java -t
 cdmlib-services/src/main/java/eu/etaxonomy/cdm/validation/constraint/NoDuplicateNamesValidator.java -text
 cdmlib-services/src/main/java/org/apache/lucene/search/MultiCollector.java -text
 cdmlib-services/src/main/resources/eu/etaxonomy/cdm/defaultApplicationContext.xml -text
+cdmlib-services/src/main/resources/eu/etaxonomy/cdm/httpInvokerServices.xml -text
+cdmlib-services/src/main/resources/eu/etaxonomy/cdm/remoting-services.xml -text
 cdmlib-services/src/main/resources/eu/etaxonomy/cdm/services.xml -text
 cdmlib-services/src/main/resources/eu/etaxonomy/cdm/services_security.xml -text
 cdmlib-services/src/main/resources/eu/etaxonomy/cdm/validation/name/TaxonNameBase-Constraints.xml -text
@@ -2165,14 +2317,17 @@ cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/application/FirstDataInserter
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeCacheStrategyTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeFieldUnitCacheStrategyTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/facade/DerivedUnitFacadeTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/AbstractSecurityTestBase.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/CommonServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/DescriptionServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/FeatureNodeServiceImplTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/GroupServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentifiableServiceBaseTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/IdentificationKeyGeneratorTTT.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/NameServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/NaturalLanguageGeneratorTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/OccurenceServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/PolytomousKeyNodeServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/PolytomousKeyServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/PreferenceServiceImplTest.java -text
@@ -2186,12 +2341,16 @@ cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceImplTest.
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TermServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/TransmissionEngineDistributionTest.java -text
-cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/UserServiceImplTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/UserAndGroupServiceImplTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/lsid/LSIDAuthorityServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/lsid/LSIDDataServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/lsid/LSIDMetadataServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/lsid/LSIDRegistryTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/molecular/AmplificationServiceTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/molecular/PrimerServiceTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/molecular/SequenceServiceTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/pager/PagerTest.java -text
+cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/utility/DescriptionUtilityTest.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/scripts/FixMultipleTextDataInImageGalleries.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/example/ApplicationExample.java -text
 cdmlib-services/src/test/java/eu/etaxonomy/cdm/test/function/ConcurrentSessionTest.java -text
@@ -2245,7 +2404,6 @@ cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/TaxonServiceImpl
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/TaxonServiceSearchTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/TermServiceImplTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/TransmissionEngineDistributionTest.xml -text
-cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/UserServiceImplTest.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/lsid/LSIDAuthorityServiceTest.testGetAuthorityWSDL-result.wsdl -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/lsid/LSIDAuthorityServiceTest.testGetAvailableServices.xml -text
 cdmlib-services/src/test/resources/eu/etaxonomy/cdm/api/service/lsid/LSIDAuthorityServiceTest.testGetAvailableServicesWithKnownLSID-result.wsdl -text
@@ -2287,15 +2445,21 @@ src/site/apt/index.apt -text
 src/site/apt/oai-pmh.apt -text
 src/site/apt/overview.apt -text
 src/site/apt/reference.apt -text
+src/site/apt/remote/checklist-catalogue-default.apt -text
+src/site/apt/remote/checklist-catalogue-export.apt -text
+src/site/apt/remote/checklist-catalogue-exportCSV.apt -text
+src/site/apt/remote/checklist-catalogue-flockSearch.apt -text
 src/site/apt/remote/name-catalogue-accepted.apt -text
 src/site/apt/remote/name-catalogue-default.apt -text
 src/site/apt/remote/name-catalogue-fuzzy.apt -text
 src/site/apt/remote/name-catalogue-name-info.apt -text
 src/site/apt/remote/name-catalogue-taxon-info.apt -text
+src/site/apt/remote/occurrence-catalogue-default.apt -text
 src/site/apt/remote/search-fulltext-info.apt -text
 src/site/apt/remote/search-name-default.apt -text
 src/site/apt/remote/search-taxon-info.apt -text
 src/site/apt/rest-api-name-catalogue.apt -text
+src/site/apt/rest-api-occurrence-catalogue.apt -text
 src/site/apt/rest-api-search.apt -text
 src/site/apt/rest-api-statistics.apt -text
 src/site/apt/rest-api.apt -text
@@ -2305,3 +2469,4 @@ src/site/resources/images/cdm-server-oai-pmh.png -text
 src/site/resources/images/cdmlib-arch4.png -text
 src/site/resources/images/cdmlib_overview.png -text
 src/site/site.xml -text
+src/test/resources/h2/cdmTest.h2.db -text svneol=unset#unset