From 47e0860cc9596900d5743bf17b482857c6143156 Mon Sep 17 00:00:00 2001
From: =?utf8?q?Andreas=20M=C3=BCller?= <a.mueller@bgbm.org>
Date: Fri, 13 Jul 2012 06:15:02 +0000
Subject: [PATCH] remove deletes from PESI export

---
 .../cdm/io/pesi/out/PesiRelTaxonExport.java          | 12 ++++++++----
 .../etaxonomy/cdm/io/pesi/out/PesiSourceExport.java  |  4 ++--
 .../etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java   |  2 +-
 3 files changed, 11 insertions(+), 7 deletions(-)

diff --git a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java
index e741f52a..474fc725 100644
--- a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java
+++ b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java
@@ -99,8 +99,8 @@ public class PesiRelTaxonExport extends PesiExportBase {
 			boolean success = true;
 
 			// PESI: Clear the database table RelTaxon.
-			doDelete(state);
-	
+			//doDelete(state); -> done by stored procedure
+			
 			// Get specific mappings: (CDM) Relationship -> (PESI) RelTaxon
 			mapping = getMapping();
 
@@ -113,6 +113,10 @@ public class PesiRelTaxonExport extends PesiExportBase {
 			
 			// Export name relations
 			success &= doPhase02(state, mapping);
+			
+			if (! success){
+				state.setUnsuccessfull();
+			}
 
 		} catch (SQLException e) {
 			e.printStackTrace();
@@ -511,7 +515,7 @@ public class PesiRelTaxonExport extends PesiExportBase {
 	 * @param state
 	 * @param sr
 	 */
-	private static void invokeSynonyms(PesiExportState state, TaxonNameBase synonymTaxonName) {
+	private void invokeSynonyms(PesiExportState state, TaxonNameBase synonymTaxonName) {
 		// Store KingdomFk and Rank information in Taxon table
 		Integer kingdomFk = PesiTransformer.nomenClaturalCode2Kingdom(synonymTaxonName.getNomenclaturalCode());
 		Integer synonymFk = state.getDbId(synonymTaxonName);
@@ -528,7 +532,7 @@ public class PesiRelTaxonExport extends PesiExportBase {
 	 * @param synonymParentTaxonFk
 	 * @param currentTaxonFk
 	 */
-	private static boolean saveSynonymData(PesiExportState state, TaxonNameBase taxonName,
+	private boolean saveSynonymData(PesiExportState state, TaxonNameBase taxonName,
 			NomenclaturalCode nomenclaturalCode, Integer kingdomFk,
 			Integer currentSynonymFk) {
 		try {
diff --git a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java
index a60969de..b9496b84 100644
--- a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java
+++ b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java
@@ -113,8 +113,8 @@ public class PesiSourceExport extends PesiExportBase {
 			boolean success = true ;
 
 			// PESI: Clear the database table Source.
-			doDelete(state);
-
+			//doDelete(state);  -> done by stored procedure
+			
 			// Get specific mappings: (CDM) Reference -> (PESI) Source
 			PesiExportMapping mapping = getMapping();
 
diff --git a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java
index 7260e012..95021ebd 100644
--- a/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java
+++ b/cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiTaxonExport.java
@@ -189,7 +189,7 @@ public class PesiTaxonExport extends PesiExportBase {
 			boolean success = true;
 	
 			// PESI: Clear the database table Taxon.
-			doDelete(state);
+//			doDelete(state);
 			
 			// Get specific mappings: (CDM) Taxon -> (PESI) Taxon
 			PesiExportMapping mapping = getMapping();
-- 
2.34.1