Patrick Plitzner [Tue, 21 Jun 2016 15:50:19 +0000 (17:50 +0200)]
Add missing nomenclatural status and taxon relations to transformer
#5448
Patrick Plitzner [Tue, 21 Jun 2016 15:49:35 +0000 (17:49 +0200)]
Add missing taxa to related objects #5448
Andreas Müller [Tue, 21 Jun 2016 12:56:14 +0000 (14:56 +0200)]
Cleanup poms in cdmlib-app
Andreas Müller [Mon, 20 Jun 2016 15:18:22 +0000 (17:18 +0200)]
Add id_1 mapping to mexico
Patrick Plitzner [Tue, 21 Jun 2016 11:59:21 +0000 (13:59 +0200)]
Update cdmlib version
Patrick Plitzner [Mon, 20 Jun 2016 15:02:22 +0000 (17:02 +0200)]
Fix ClassCastException, improve taxon name check, fix rank evaluation
#5448
Andreas Müller [Mon, 20 Jun 2016 15:06:18 +0000 (17:06 +0200)]
Update to mexico import #5822 / #5892
Patrick Plitzner [Mon, 20 Jun 2016 06:44:14 +0000 (08:44 +0200)]
Import synonyms of other classifications #5448
Patrick Plitzner [Wed, 15 Jun 2016 16:50:30 +0000 (18:50 +0200)]
Set sec reference for all taxa #5448
Andreas Müller [Fri, 17 Jun 2016 21:46:23 +0000 (23:46 +0200)]
minor
Andreas Müller [Fri, 17 Jun 2016 21:43:48 +0000 (23:43 +0200)]
First version of Mexico import #5822
Katja Luther [Fri, 17 Jun 2016 13:07:29 +0000 (15:07 +0200)]
improve fauna europaea author import
Patrick Plitzner [Thu, 2 Jun 2016 12:19:38 +0000 (14:19 +0200)]
Update version number and add itextpdf due to version depency conflict
Patrick Plitzner [Thu, 2 Jun 2016 12:09:33 +0000 (14:09 +0200)]
Improve name check for unranked taxa #5448
Patrick Plitzner [Thu, 2 Jun 2016 07:28:29 +0000 (09:28 +0200)]
Import unranked taxa #5448
Patrick Plitzner [Thu, 2 Jun 2016 07:06:17 +0000 (09:06 +0200)]
Refactoring/code clean-up #5448
Patrick Plitzner [Thu, 2 Jun 2016 06:53:57 +0000 (08:53 +0200)]
Import common name #5448
Patrick Plitzner [Thu, 2 Jun 2016 06:44:17 +0000 (08:44 +0200)]
Import additional hybrid variants #5448
Patrick Plitzner [Tue, 31 May 2016 09:41:24 +0000 (11:41 +0200)]
Set source ref for taxa #5448
Patrick Plitzner [Wed, 25 May 2016 09:23:19 +0000 (11:23 +0200)]
Improve taxon name check #5448
Andreas Müller [Wed, 25 May 2016 10:24:52 +0000 (12:24 +0200)]
Remove generics from Reference in cdmlib-app #5830
Patrick Plitzner [Wed, 25 May 2016 08:25:06 +0000 (10:25 +0200)]
Improve logging messages #5448
Patrick Plitzner [Wed, 25 May 2016 08:24:35 +0000 (10:24 +0200)]
Add SEQNUM #5448
Patrick Plitzner [Wed, 25 May 2016 08:24:21 +0000 (10:24 +0200)]
Import hybrid formulas #5448
Patrick Plitzner [Tue, 24 May 2016 14:44:52 +0000 (16:44 +0200)]
Add taxa to classifications #5448
Patrick Plitzner [Tue, 24 May 2016 08:28:47 +0000 (10:28 +0200)]
Correctly set relationship direction #5448
Patrick Plitzner [Tue, 24 May 2016 08:28:11 +0000 (10:28 +0200)]
Import concept relations E, W, K, AW, AO, R, O, S #5448
Patrick Plitzner [Mon, 23 May 2016 17:41:49 +0000 (19:41 +0200)]
Refactor names and taxa creation #5448
Patrick Plitzner [Mon, 23 May 2016 17:17:34 +0000 (19:17 +0200)]
Add 8 more classifications #5448
Patrick Plitzner [Mon, 23 May 2016 15:53:47 +0000 (17:53 +0200)]
improve taxon name check #5448
- add new string constants
Patrick Plitzner [Mon, 23 May 2016 14:31:01 +0000 (16:31 +0200)]
Set trinomial hybrids #5448
- improve taxon name check
Patrick Plitzner [Mon, 23 May 2016 13:47:44 +0000 (15:47 +0200)]
Avoid duplicate UUIDs by fixing the order of adding original sources
#5448
Patrick Plitzner [Sun, 22 May 2016 08:24:34 +0000 (10:24 +0200)]
Handle hybrid names (only binomial at the moment)
Patrick Plitzner [Sun, 22 May 2016 08:23:47 +0000 (10:23 +0200)]
Fix typo
Patrick Plitzner [Wed, 18 May 2016 13:13:28 +0000 (15:13 +0200)]
Fix ClassCastException and ordering #5452
Patrick Plitzner [Wed, 18 May 2016 12:56:56 +0000 (14:56 +0200)]
Refactor constants
Patrick Plitzner [Wed, 18 May 2016 07:31:08 +0000 (09:31 +0200)]
Ordering of XML elements and some refactoring #5452
Patrick Plitzner [Wed, 11 May 2016 12:09:29 +0000 (14:09 +0200)]
Export concept realtion type #5452
Patrick Plitzner [Wed, 11 May 2016 12:08:28 +0000 (14:08 +0200)]
Adjust import/export path #5452
Patrick Plitzner [Wed, 11 May 2016 11:02:54 +0000 (13:02 +0200)]
Refactored conceptCode map and TaxonRelation map #5452
Andreas Müller [Wed, 11 May 2016 11:38:23 +0000 (13:38 +0200)]
Update BgbmInstancesUpdater
Patrick Plitzner [Wed, 11 May 2016 08:52:47 +0000 (10:52 +0200)]
Export concept relationships
Patrick Plitzner [Wed, 11 May 2016 08:52:03 +0000 (10:52 +0200)]
Change imported classification name
Patrick Plitzner [Tue, 10 May 2016 16:09:39 +0000 (18:09 +0200)]
Remove unused generic and logger
Patrick Plitzner [Tue, 10 May 2016 16:04:14 +0000 (18:04 +0200)]
Export taxNr
Patrick Plitzner [Tue, 10 May 2016 14:35:19 +0000 (16:35 +0200)]
Fix export of TextData
Patrick Plitzner [Tue, 10 May 2016 14:34:55 +0000 (16:34 +0200)]
Use ISO date
Patrick Plitzner [Tue, 10 May 2016 14:34:09 +0000 (16:34 +0200)]
Import taxNr as identifier of taxon
Patrick Plitzner [Tue, 10 May 2016 11:45:59 +0000 (13:45 +0200)]
Remove supporsCategoricalData flag for TextData features
Patrick Plitzner [Tue, 10 May 2016 10:21:40 +0000 (12:21 +0200)]
Export synonymy and TextData
- some refactoring
Patrick Plitzner [Tue, 10 May 2016 10:21:04 +0000 (12:21 +0200)]
Set root element attributes
Patrick Plitzner [Mon, 9 May 2016 15:45:17 +0000 (17:45 +0200)]
Export features ("Eigenschaften")
Patrick Plitzner [Mon, 9 May 2016 13:37:54 +0000 (15:37 +0200)]
Refactored term import
Patrick Plitzner [Wed, 4 May 2016 15:58:33 +0000 (17:58 +0200)]
Sort exported taxon list
Patrick Plitzner [Wed, 4 May 2016 15:46:50 +0000 (17:46 +0200)]
Export common name
Patrick Plitzner [Wed, 4 May 2016 15:29:11 +0000 (17:29 +0200)]
Export epithet, rank and scientific name
Patrick Plitzner [Wed, 4 May 2016 09:45:16 +0000 (11:45 +0200)]
Add logging
Patrick Plitzner [Wed, 4 May 2016 09:44:56 +0000 (11:44 +0200)]
Export taxonym "bereich"
Patrick Plitzner [Wed, 4 May 2016 09:04:55 +0000 (11:04 +0200)]
Import taxa
Patrick Plitzner [Tue, 3 May 2016 15:42:44 +0000 (17:42 +0200)]
minor
Patrick Plitzner [Tue, 3 May 2016 13:14:32 +0000 (15:14 +0200)]
Write export to XML file
Patrick Plitzner [Tue, 3 May 2016 10:50:35 +0000 (12:50 +0200)]
Initial import of BfnXmlExport #5452
Patrick Plitzner [Tue, 3 May 2016 10:50:14 +0000 (12:50 +0200)]
Revert missing rank constant
Patrick Plitzner [Tue, 3 May 2016 08:14:56 +0000 (10:14 +0200)]
Fix logger instantiation
Patrick Plitzner [Tue, 3 May 2016 08:10:24 +0000 (10:10 +0200)]
Refactored string constants
Patrick Plitzner [Tue, 3 May 2016 06:27:58 +0000 (08:27 +0200)]
Structure package architecture for BfnXml Im-/Export
Andreas Müller [Mon, 2 May 2016 18:52:19 +0000 (20:52 +0200)]
Update cdmlib-apps version to 4.1
Andreas Müller [Mon, 2 May 2016 18:49:47 +0000 (20:49 +0200)]
minor
Andreas Müller [Mon, 2 May 2016 18:48:45 +0000 (20:48 +0200)]
update test model in appimport
Andreas Müller [Tue, 19 Apr 2016 10:39:01 +0000 (12:39 +0200)]
Adapt table and column names to hibernate 5 naming strategy (app-import
part) #5369
Patrick Plitzner [Wed, 13 Apr 2016 06:25:53 +0000 (08:25 +0200)]
Fix taxon node creation for nodes with no parents
Katja Luther [Thu, 7 Apr 2016 12:53:00 +0000 (14:53 +0200)]
fix encoding problems
Katja Luther [Thu, 7 Apr 2016 11:24:40 +0000 (13:24 +0200)]
Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
Katja Luther [Thu, 7 Apr 2016 11:23:44 +0000 (13:23 +0200)]
changes for fauna europaea import (misapplied names, improved taxonnode agent relationship)
Patrick Plitzner [Mon, 4 Apr 2016 14:30:02 +0000 (16:30 +0200)]
Set sec reference for taxa
Patrick Plitzner [Mon, 4 Apr 2016 14:29:49 +0000 (16:29 +0200)]
Check taxon name consistency
Patrick Plitzner [Mon, 4 Apr 2016 13:12:41 +0000 (15:12 +0200)]
Set sec references for classifications
Patrick Plitzner [Mon, 4 Apr 2016 08:49:58 +0000 (10:49 +0200)]
Fix import of misapplied names
Patrick Plitzner [Tue, 29 Mar 2016 08:40:12 +0000 (10:40 +0200)]
Add checklist taxa to related taxa
- set name for "Gesamtliste"
Andreas Müller [Fri, 1 Apr 2016 15:17:15 +0000 (17:17 +0200)]
Latest changes to cuba import #5443
Patrick Plitzner [Tue, 29 Mar 2016 06:11:00 +0000 (08:11 +0200)]
Add null checks
Patrick Plitzner [Tue, 29 Mar 2016 05:07:10 +0000 (07:07 +0200)]
Import taxa separately into checklist classification and GesamtListe
classification
Patrick Plitzner [Wed, 23 Mar 2016 18:50:07 +0000 (19:50 +0100)]
Add unique UUIDs
Patrick Plitzner [Wed, 23 Mar 2016 18:42:10 +0000 (19:42 +0100)]
Import TAX_ZUSATZ
Patrick Plitzner [Wed, 23 Mar 2016 17:55:58 +0000 (18:55 +0100)]
Correctly set appended phrase for taxon
Patrick Plitzner [Tue, 22 Mar 2016 10:42:43 +0000 (11:42 +0100)]
Trim logging
Patrick Plitzner [Tue, 22 Mar 2016 09:07:06 +0000 (10:07 +0100)]
Refactor use of CdmUtils
Patrick Plitzner [Tue, 22 Mar 2016 09:02:09 +0000 (10:02 +0100)]
Import nomenclatural status
Patrick Plitzner [Mon, 21 Mar 2016 17:28:16 +0000 (18:28 +0100)]
Refactor string constants
Patrick Plitzner [Mon, 21 Mar 2016 17:04:48 +0000 (18:04 +0100)]
Add utils log method
Patrick Plitzner [Mon, 21 Mar 2016 16:56:20 +0000 (17:56 +0100)]
Refactor duplicate code
Patrick Plitzner [Mon, 21 Mar 2016 15:39:09 +0000 (16:39 +0100)]
Added new rank transformation
Patrick Plitzner [Mon, 21 Mar 2016 15:38:58 +0000 (16:38 +0100)]
Handle misapplied names
Andreas Müller [Fri, 18 Mar 2016 15:17:34 +0000 (16:17 +0100)]
Latest changes to FM activator
Andreas Müller [Fri, 18 Mar 2016 15:17:15 +0000 (16:17 +0100)]
minor
Andreas Müller [Fri, 18 Mar 2016 15:16:23 +0000 (16:16 +0100)]
Latest changes to Cuba import
Andreas Müller [Thu, 17 Mar 2016 13:30:49 +0000 (14:30 +0100)]
Update sources to Flore du Gabon
Patrick Plitzner [Wed, 16 Mar 2016 09:44:38 +0000 (10:44 +0100)]
Enhance name check
Patrick Plitzner [Wed, 16 Mar 2016 08:19:20 +0000 (09:19 +0100)]
Handle Misapplications
- speed up author loading
Patrick Plitzner [Tue, 15 Mar 2016 15:54:07 +0000 (16:54 +0100)]
Correct combination author handling
- ex author error handling