cdmlib-apps.git
4 years agoref #9041 UzbekistanAltitudeActivator added
Andreas Müller [Tue, 2 Jun 2020 09:18:38 +0000 (11:18 +0200)]
ref #9041  UzbekistanAltitudeActivator added

4 years agoref #9005 adapt imports to new TaxonNode.status and status notes
Andreas Müller [Thu, 28 May 2020 12:42:17 +0000 (14:42 +0200)]
ref #9005 adapt imports to new TaxonNode.status and status notes

4 years agofix #8996 latest changes to FoU import
Andreas Müller [Thu, 28 May 2020 12:41:02 +0000 (14:41 +0200)]
fix #8996 latest changes to FoU import

4 years agoref #9018 Casearia import
Andreas Müller [Thu, 14 May 2020 15:35:29 +0000 (17:35 +0200)]
ref #9018 Casearia import

4 years agocleanup
Andreas Müller [Thu, 14 May 2020 15:30:43 +0000 (17:30 +0200)]
cleanup

4 years agoref #8996 import Uzbekistan taxonomy (first version)
Andreas Müller [Thu, 14 May 2020 15:29:55 +0000 (17:29 +0200)]
ref #8996 import Uzbekistan taxonomy (first version)

4 years agocleanup
Andreas Müller [Fri, 8 May 2020 11:01:58 +0000 (13:01 +0200)]
cleanup

4 years agoref #7075 improve language handling Flora of Greece image import
Andreas Müller [Fri, 8 May 2020 11:01:22 +0000 (13:01 +0200)]
ref #7075 improve language handling Flora of Greece image import

4 years agoref #8978 adapt app-import to StatisticalMeasurementValue.value as BigDecimal
Andreas Müller [Mon, 4 May 2020 22:41:29 +0000 (00:41 +0200)]
ref #8978 adapt app-import to StatisticalMeasurementValue.value as BigDecimal

4 years agofix #8934 final changes to FoG status import
Andreas Müller [Thu, 9 Apr 2020 11:07:33 +0000 (13:07 +0200)]
fix #8934 final changes to FoG status import

4 years agoref #8934 changes to FoG status import
Andreas Müller [Wed, 8 Apr 2020 21:05:43 +0000 (23:05 +0200)]
ref #8934 changes to FoG status import

4 years agoref #8886 lichenes source and destination updated
Andreas Müller [Wed, 8 Apr 2020 20:23:23 +0000 (22:23 +0200)]
ref #8886 lichenes source and destination updated

4 years agoMerge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps
a.mueller [Sun, 5 Apr 2020 06:19:13 +0000 (08:19 +0200)]
Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps

4 years agoref #8886 minor fix for lichenes genera import
a.mueller [Sun, 5 Apr 2020 06:18:39 +0000 (08:18 +0200)]
ref #8886 minor fix for lichenes genera import

4 years agoref #8934 implement FoG status import
a.mueller [Sun, 5 Apr 2020 06:17:38 +0000 (08:17 +0200)]
ref #8934 implement FoG status import

4 years agocleanup
a.mueller [Sun, 5 Apr 2020 06:16:31 +0000 (08:16 +0200)]
cleanup

4 years agofix #8886 minor changes to lichenes genera import
Andreas Müller [Thu, 2 Apr 2020 12:57:12 +0000 (14:57 +0200)]
fix #8886 minor changes to lichenes genera import

4 years agocleanup poms in cdmlib-app
a.mueller [Thu, 2 Apr 2020 12:46:02 +0000 (14:46 +0200)]
cleanup poms in cdmlib-app

4 years agofix #8886 finalize lichenes genera import
a.mueller [Thu, 2 Apr 2020 12:40:29 +0000 (14:40 +0200)]
fix #8886 finalize lichenes genera import

4 years agocleanup
Andreas Müller [Sun, 29 Mar 2020 06:22:07 +0000 (08:22 +0200)]
cleanup

4 years agoref #8886 first not yet compiling version of Lichenes import
Andreas Müller [Sun, 29 Mar 2020 06:20:55 +0000 (08:20 +0200)]
ref #8886 first not yet compiling version of Lichenes import

4 years agoimplement commandline TreeIndexUpdaterActivator
Andreas Müller [Fri, 28 Feb 2020 14:22:50 +0000 (15:22 +0100)]
implement commandline TreeIndexUpdaterActivator

4 years agosome change
Andreas Müller [Fri, 28 Feb 2020 12:40:55 +0000 (13:40 +0100)]
some change

4 years agoadapt datasource name for caryo_genus
Andreas Müller [Fri, 21 Feb 2020 09:50:37 +0000 (10:50 +0100)]
adapt datasource name for caryo_genus

4 years agofix #8853 Aizoaceae finalized
Andreas Müller [Fri, 21 Feb 2020 09:50:10 +0000 (10:50 +0100)]
fix #8853 Aizoaceae finalized

4 years agocleanup
Andreas Müller [Fri, 21 Feb 2020 09:48:26 +0000 (10:48 +0100)]
cleanup

4 years agoref #8853 Aizoaceae import more or less ready
Andreas Müller [Thu, 20 Feb 2020 12:46:16 +0000 (13:46 +0100)]
ref #8853 Aizoaceae import more or less ready

4 years agominor changes to GreeceImageActivator
Andreas Müller [Thu, 13 Feb 2020 14:46:24 +0000 (15:46 +0100)]
minor changes to GreeceImageActivator

4 years agoref #1447 improve command line merger
Andreas Müller [Tue, 11 Feb 2020 12:35:43 +0000 (13:35 +0100)]
ref #1447 improve command line merger

4 years agoref #1447 further improve findIdenticalNames for PESI
Andreas Müller [Fri, 31 Jan 2020 08:47:27 +0000 (09:47 +0100)]
ref #1447 further improve findIdenticalNames for PESI

4 years agoadd inverse labels to pseudoaccepted relationship
Andreas Müller [Fri, 31 Jan 2020 08:46:10 +0000 (09:46 +0100)]
add inverse labels to pseudoaccepted relationship

4 years agocleanup
Andreas Müller [Fri, 31 Jan 2020 08:45:35 +0000 (09:45 +0100)]
cleanup

4 years agoref #1447 Improve FindIdenticalNames for PESI
Andreas Müller [Wed, 22 Jan 2020 10:43:07 +0000 (11:43 +0100)]
ref #1447 Improve FindIdenticalNames for PESI

4 years agoref #1447, ref #1445 TaxonNode mover for high level taxa
Andreas Müller [Wed, 22 Jan 2020 10:41:47 +0000 (11:41 +0100)]
ref #1447, ref #1445 TaxonNode mover for high level taxa

4 years agoref #1447 implement PESI commandline merger
Andreas Müller [Wed, 22 Jan 2020 10:40:16 +0000 (11:40 +0100)]
ref #1447 implement PESI commandline merger

4 years agoref #2826 improve IF import to PESI (merge) requirements
Andreas Müller [Wed, 22 Jan 2020 10:36:59 +0000 (11:36 +0100)]
ref #2826 improve IF import to PESI (merge) requirements

4 years agoref #2826 handle verbatim years better
Andreas Müller [Sat, 18 Jan 2020 15:22:22 +0000 (16:22 +0100)]
ref #2826 handle verbatim years better

4 years agoref #2826 handle ined. authors
Andreas Müller [Sat, 18 Jan 2020 15:21:48 +0000 (16:21 +0100)]
ref #2826 handle ined. authors

4 years agoref #2826 cleanup
Andreas Müller [Sat, 18 Jan 2020 11:20:32 +0000 (12:20 +0100)]
ref #2826 cleanup

4 years agoref #2826 remove not needed cdmTargetClass
Andreas Müller [Sat, 18 Jan 2020 11:19:45 +0000 (12:19 +0100)]
ref #2826 remove not needed cdmTargetClass

4 years agominor, cleanup
Andreas Müller [Sat, 18 Jan 2020 10:45:14 +0000 (11:45 +0100)]
minor, cleanup

4 years agocleanup
Andreas Müller [Tue, 14 Jan 2020 15:27:47 +0000 (16:27 +0100)]
cleanup

4 years ago minor changes to PESI Activators
Andreas Müller [Tue, 14 Jan 2020 15:23:29 +0000 (16:23 +0100)]
 minor changes to PESI Activators

4 years agolatest changes to GreeceImageActivator
Andreas Müller [Tue, 14 Jan 2020 15:15:27 +0000 (16:15 +0100)]
latest changes to GreeceImageActivator

4 years agoref #1447 handle null and ERMS pseudo taxa and some minor changes
Andreas Müller [Tue, 14 Jan 2020 15:13:57 +0000 (16:13 +0100)]
ref #1447 handle null and ERMS pseudo taxa and some minor changes

4 years agoref #1447 underscore for parent diff file
Andreas Müller [Mon, 13 Jan 2020 15:35:11 +0000 (16:35 +0100)]
ref #1447 underscore for parent diff file

4 years agoref #1447 remove unncessary casts and cleanup
Andreas Müller [Mon, 13 Jan 2020 14:11:41 +0000 (15:11 +0100)]
ref #1447 remove unncessary casts and cleanup

4 years agoref #1447 add utf8 to writer
Andreas Müller [Mon, 13 Jan 2020 13:48:10 +0000 (14:48 +0100)]
ref #1447 add utf8 to writer

4 years agocleanup
Andreas Müller [Sun, 12 Jan 2020 00:05:38 +0000 (01:05 +0100)]
cleanup

4 years agoref #8643 fix FaEu destination 2
Andreas Müller [Sun, 12 Jan 2020 00:02:09 +0000 (01:02 +0100)]
ref #8643 fix FaEu destination 2

4 years agoref #1447 improve PesiFindIdenticalNamesActivator
Andreas Müller [Fri, 10 Jan 2020 11:17:30 +0000 (12:17 +0100)]
ref #1447 improve PesiFindIdenticalNamesActivator

4 years agorevert wrong merge changes on findIdenticalNameActivator
Katja Luther [Fri, 10 Jan 2020 09:19:16 +0000 (10:19 +0100)]
revert wrong merge changes on findIdenticalNameActivator

4 years agomerge changes
Katja Luther [Fri, 10 Jan 2020 09:10:45 +0000 (10:10 +0100)]
merge changes

4 years agoref #8508, ref #8577 treeindex test for E+M validation and common base class for...
Andreas Müller [Mon, 6 Jan 2020 16:01:31 +0000 (17:01 +0100)]
ref #8508, ref #8577 treeindex test for E+M validation and common base class for E+M and Erms validation

4 years agoref #1447 cleanup FaunaEuErmsFindIdenticalNamesActivator
Andreas Müller [Mon, 6 Jan 2020 14:40:45 +0000 (15:40 +0100)]
ref #1447 cleanup FaunaEuErmsFindIdenticalNamesActivator

4 years agoref #1444 minor fixes for ErmsImportActivator
Andreas Müller [Sat, 28 Dec 2019 15:10:54 +0000 (16:10 +0100)]
ref #1444 minor fixes for ErmsImportActivator

4 years agoref #2717 fix sourceFk handling for pure names
Andreas Müller [Sat, 28 Dec 2019 15:09:05 +0000 (16:09 +0100)]
ref #2717 fix sourceFk handling for pure names

4 years agoref #8508 fix and finalize taxon status (cache) validation
Andreas Müller [Sat, 28 Dec 2019 15:06:32 +0000 (16:06 +0100)]
ref #8508 fix and finalize taxon status (cache) validation

4 years agoref #1444, ref #8508, ref #8509 fix ERMS taxon status handling
Andreas Müller [Sat, 28 Dec 2019 10:45:26 +0000 (11:45 +0100)]
ref #1444, ref #8508, ref #8509 fix ERMS taxon status handling

4 years agoref #8508 further improvements to ERMS validation
Andreas Müller [Sat, 28 Dec 2019 09:48:36 +0000 (10:48 +0100)]
ref #8508 further improvements to ERMS validation

4 years agoref #8509 fix sourceFk handling in PESI taxon export
Andreas Müller [Fri, 27 Dec 2019 22:16:33 +0000 (23:16 +0100)]
ref #8509 fix sourceFk handling in PESI taxon export

4 years agoref #8509 improve tagged names handling in PESI export (ERMS and others)
Andreas Müller [Fri, 27 Dec 2019 22:14:35 +0000 (23:14 +0100)]
ref #8509 improve tagged names handling in PESI export (ERMS and others)

4 years agoref #1444, ref #7976 fix erronous subgenus formatting in ERMS
Andreas Müller [Fri, 27 Dec 2019 22:11:44 +0000 (23:11 +0100)]
ref #1444, ref #7976 fix erronous subgenus formatting in ERMS

4 years agoref #1444, ref #7976 better logging for unhandled unacceptReason
Andreas Müller [Fri, 27 Dec 2019 22:09:59 +0000 (23:09 +0100)]
ref #1444, ref #7976 better logging for unhandled unacceptReason

4 years agocleanup
Andreas Müller [Fri, 27 Dec 2019 21:49:15 +0000 (22:49 +0100)]
cleanup

4 years agoref #8508 improve treeindex validation and remove source type 'i' handling
Andreas Müller [Fri, 27 Dec 2019 08:48:12 +0000 (09:48 +0100)]
ref #8508 improve treeindex validation and remove source type 'i' handling

4 years agoref #1444, ref #2871, ref #7976 improve authorship handling for MAN
Andreas Müller [Fri, 27 Dec 2019 08:39:31 +0000 (09:39 +0100)]
ref #1444, ref #2871, ref #7976 improve authorship handling for MAN

4 years agoref #1444 remove 2 taxon status checks from ErmsTaxonImportValidator as they are...
Andreas Müller [Fri, 27 Dec 2019 08:37:17 +0000 (09:37 +0100)]
ref #1444 remove 2 taxon status checks from ErmsTaxonImportValidator as they are not correct anymore

- status is now handled via id and tu_accfinal, not via taxonStatus field

4 years agoref #2104 remove fixme from unused PesiNoteSourceExport_Old
Andreas Müller [Thu, 26 Dec 2019 20:12:47 +0000 (21:12 +0100)]
ref #2104 remove fixme from unused PesiNoteSourceExport_Old

4 years agoref #8508 latest changes
Andreas Müller [Thu, 26 Dec 2019 18:29:36 +0000 (19:29 +0100)]
ref #8508 latest changes

4 years agocleanup
Andreas Müller [Thu, 26 Dec 2019 18:28:20 +0000 (19:28 +0100)]
cleanup

4 years agoref #1444, ref #7976 improve misapplication handling in ERMS import
Andreas Müller [Thu, 26 Dec 2019 18:21:23 +0000 (19:21 +0100)]
ref #1444, ref #7976 improve misapplication handling in ERMS import

4 years agoref #8508 minor and cleanup
Andreas Müller [Thu, 26 Dec 2019 12:59:01 +0000 (13:59 +0100)]
ref #8508 minor and cleanup

4 years agoref #8509 handle new ERMS quality status "Thematic Editor"
Andreas Müller [Thu, 26 Dec 2019 12:56:51 +0000 (13:56 +0100)]
ref #8509 handle new ERMS quality status "Thematic Editor"

4 years agoref #1444, #8509 fix pipeline handling in ErmsImportActivator
Andreas Müller [Thu, 26 Dec 2019 12:55:23 +0000 (13:55 +0100)]
ref #1444, #8509 fix pipeline handling in ErmsImportActivator

4 years agoref #1444 replace tu_acctaxon by tu_accfinal
Andreas Müller [Thu, 26 Dec 2019 12:50:27 +0000 (13:50 +0100)]
ref #1444 replace tu_acctaxon by tu_accfinal

4 years agoref #8508 latest changes to ERMS validation
Andreas Müller [Tue, 24 Dec 2019 00:52:03 +0000 (01:52 +0100)]
ref #8508 latest changes to ERMS validation

4 years agocleanup
Andreas Müller [Tue, 24 Dec 2019 00:51:18 +0000 (01:51 +0100)]
cleanup

4 years agoref #8509 fix taxonStatus export for ERMS
Andreas Müller [Tue, 24 Dec 2019 00:45:56 +0000 (01:45 +0100)]
ref #8509 fix taxonStatus export for ERMS

4 years agocleanup
Andreas Müller [Mon, 23 Dec 2019 20:37:08 +0000 (21:37 +0100)]
cleanup

4 years agoref #2717 remove publish marker and uuidMisappliedCommonName marker handling because...
Andreas Müller [Mon, 23 Dec 2019 20:36:53 +0000 (21:36 +0100)]
ref #2717 remove publish marker and uuidMisappliedCommonName marker handling because not needed anymore

4 years agoref #2717 add 2nd source to EuroMedSourceActivator
Andreas Müller [Mon, 23 Dec 2019 20:32:41 +0000 (21:32 +0100)]
ref #2717 add 2nd source to EuroMedSourceActivator

4 years agoref #1444 handle missing sourceUse
Andreas Müller [Mon, 23 Dec 2019 19:56:12 +0000 (20:56 +0100)]
ref #1444 handle missing sourceUse

4 years agoref #1444 minor changes and cleanup
Andreas Müller [Mon, 23 Dec 2019 19:31:57 +0000 (20:31 +0100)]
ref #1444 minor changes and cleanup

4 years agoref #1444 some changes due to upgrade to ERMS v2019
Andreas Müller [Mon, 23 Dec 2019 19:30:14 +0000 (20:30 +0100)]
ref #1444 some changes due to upgrade to ERMS v2019

4 years agoref #1444 add new ERMS source and rename old one
Andreas Müller [Mon, 23 Dec 2019 19:28:22 +0000 (20:28 +0100)]
ref #1444 add new ERMS source and rename old one

4 years agocleanup and move isIgnoreNull from base configurator to BMconfig only
Andreas Müller [Mon, 23 Dec 2019 09:00:07 +0000 (10:00 +0100)]
cleanup and move isIgnoreNull from base configurator to BMconfig only

4 years agoref #2717 some updates to PESI export
Andreas Müller [Sun, 22 Dec 2019 22:08:41 +0000 (23:08 +0100)]
ref #2717 some updates to PESI export

4 years agoref #8577 improve E+M export validation
Andreas Müller [Sun, 22 Dec 2019 22:06:31 +0000 (23:06 +0100)]
ref #8577 improve E+M export validation

4 years agoref #2717 adapt export for DisplayName, WebShowName etc. to E+M requirements
Andreas Müller [Mon, 9 Dec 2019 16:17:52 +0000 (17:17 +0100)]
ref #2717 adapt export for DisplayName, WebShowName etc. to E+M requirements

4 years agoadapt E+M activator to new AggregationMode class
Andreas Müller [Mon, 9 Dec 2019 16:07:39 +0000 (17:07 +0100)]
adapt E+M activator to new AggregationMode class

4 years agocleanup
Andreas Müller [Mon, 9 Dec 2019 16:07:03 +0000 (17:07 +0100)]
cleanup

4 years agoadd Serbia + Kosovo, remove NorthAmerica from PESI areas
Andreas Müller [Mon, 9 Dec 2019 16:06:19 +0000 (17:06 +0100)]
add Serbia + Kosovo, remove NorthAmerica from PESI areas

4 years agominor
Andreas Müller [Tue, 3 Dec 2019 08:43:18 +0000 (09:43 +0100)]
minor

4 years agocleanup
Andreas Müller [Fri, 29 Nov 2019 15:27:52 +0000 (16:27 +0100)]
cleanup

4 years ago#3945 move some PESI classes to new packages and minor issues
Andreas Müller [Fri, 29 Nov 2019 15:12:41 +0000 (16:12 +0100)]
#3945 move some PESI classes to new packages and minor issues

4 years agofix E+M Activator
Andreas Müller [Thu, 28 Nov 2019 14:55:58 +0000 (15:55 +0100)]
fix E+M Activator

4 years agocleanup
Andreas Müller [Thu, 28 Nov 2019 14:54:06 +0000 (15:54 +0100)]
cleanup

4 years agoupdate BgbmInstancesUpdater
Andreas Müller [Thu, 28 Nov 2019 14:52:45 +0000 (15:52 +0100)]
update BgbmInstancesUpdater

4 years agoref #8689 some updates to BupleurumExportActivator
Andreas Müller [Tue, 19 Nov 2019 00:11:39 +0000 (01:11 +0100)]
ref #8689 some updates to BupleurumExportActivator