cdmlib-apps.git
5 years agoref #7669 latest changes to Greece Willing images import, incl. no barcode import
Andreas Müller [Fri, 22 Mar 2019 17:07:39 +0000 (18:07 +0100)]
ref #7669  latest changes to Greece Willing images import, incl. no barcode import

5 years agodb-name change in IAPTActivator
Andreas Kohlbecker [Thu, 4 Oct 2018 09:47:41 +0000 (11:47 +0200)]
db-name change in IAPTActivator

5 years agoupdate to GreeceImageActivator
Andreas Müller [Tue, 19 Mar 2019 12:47:21 +0000 (13:47 +0100)]
update to GreeceImageActivator

5 years agoupdate mysql driver in commented unitils datasource
Andreas Müller [Tue, 19 Mar 2019 10:55:03 +0000 (11:55 +0100)]
update mysql driver in commented unitils datasource

5 years agoadapt GermanSLImporBase inheritance
Andreas Müller [Tue, 19 Mar 2019 10:44:54 +0000 (11:44 +0100)]
adapt GermanSLImporBase inheritance

5 years agoAdapt imports to tem model changes
Patrick Plitzner [Fri, 15 Mar 2019 07:18:45 +0000 (08:18 +0100)]
Adapt imports to tem model changes

5 years agoE+M specific book recognition?
Andreas Müller [Wed, 6 Mar 2019 16:24:22 +0000 (17:24 +0100)]
E+M specific book recognition?

5 years agominor
Andreas Müller [Wed, 6 Mar 2019 16:20:18 +0000 (17:20 +0100)]
minor

5 years agoref #8162 move FeatureTree and FeatureNode to term package in cdmlib-app
Andreas Müller [Wed, 6 Mar 2019 12:24:47 +0000 (13:24 +0100)]
ref #8162 move FeatureTree and FeatureNode to term package in cdmlib-app

5 years agoref #8162 move OriginalSourceXXX to reference package in cdmlib-app
Andreas Müller [Wed, 6 Mar 2019 12:22:40 +0000 (13:22 +0100)]
ref #8162 move OriginalSourceXXX to reference package in cdmlib-app

5 years agofix merge issue in PlantGlossaryCsvImportState
Andreas Müller [Tue, 5 Mar 2019 15:25:52 +0000 (16:25 +0100)]
fix merge issue in PlantGlossaryCsvImportState

5 years agofix #8162 adapt PlantGlossaryCategoryAsPropertiesImport to new terms package structure
Andreas Müller [Tue, 5 Mar 2019 11:17:46 +0000 (12:17 +0100)]
fix #8162 adapt PlantGlossaryCategoryAsPropertiesImport to new terms package structure

5 years agoMerge branch 'master' into feature8162
Andreas Müller [Tue, 5 Mar 2019 10:49:45 +0000 (11:49 +0100)]
Merge branch 'master' into feature8162

Conflicts:
app-import/src/main/java/eu/etaxonomy/cdm/io/plantglossary/PlantGlossaryCsvImportState.java

5 years agoref #8162 adapt cdmlip-app to new term package structure
Andreas Müller [Mon, 4 Mar 2019 23:19:01 +0000 (00:19 +0100)]
ref #8162 adapt cdmlip-app to new term package structure

5 years agoImport terms as Features instead of modifiers
Patrick Plitzner [Wed, 20 Feb 2019 13:42:52 +0000 (14:42 +0100)]
Import terms as Features instead of modifiers

 - Add idInSource, idInVocabulary

5 years agoImport plant glossary categories as modifier terms
Patrick Plitzner [Wed, 20 Feb 2019 08:40:08 +0000 (09:40 +0100)]
Import plant glossary categories as modifier terms

5 years agoref #7420 last changes to Phycobank higher classification import
Andreas Müller [Tue, 19 Feb 2019 15:01:18 +0000 (16:01 +0100)]
ref #7420 last changes to Phycobank higher classification import

5 years agoImplement Prometheus properties import
Patrick Plitzner [Mon, 18 Feb 2019 14:55:51 +0000 (15:55 +0100)]
Implement Prometheus properties import

5 years agoupdate pom versions in appimport
Andreas Müller [Thu, 14 Feb 2019 13:37:38 +0000 (14:37 +0100)]
update pom versions in appimport

5 years agominor
Andreas Müller [Thu, 14 Feb 2019 13:30:13 +0000 (14:30 +0100)]
minor

5 years agolatest changes to Greece image import
Andreas Müller [Thu, 14 Feb 2019 13:29:47 +0000 (14:29 +0100)]
latest changes to Greece image import

5 years agoref #1444 ref #7976 some changes to ERMS import
Andreas Müller [Thu, 14 Feb 2019 13:28:45 +0000 (14:28 +0100)]
ref #1444 ref #7976 some changes to ERMS import

5 years agoAdd additivity_ontology to plant glossary and KEW import
Patrick Plitzner [Tue, 29 Jan 2019 15:47:48 +0000 (16:47 +0100)]
Add additivity_ontology to plant glossary and KEW import

5 years agoOnly add example annotation when it exists
Patrick Plitzner [Tue, 29 Jan 2019 14:49:40 +0000 (15:49 +0100)]
Only add example annotation when it exists

5 years agoAdd id in vocabulary and source to terms
Patrick Plitzner [Tue, 29 Jan 2019 14:36:49 +0000 (15:36 +0100)]
Add id in vocabulary and source to terms

5 years agoImplement Kew Plant Glossary CSV import
Patrick Plitzner [Fri, 25 Jan 2019 14:54:29 +0000 (15:54 +0100)]
Implement Kew Plant Glossary CSV import

5 years agoImport categories and states of FloraTerms (PlantGlossary)
Patrick Plitzner [Fri, 18 Jan 2019 12:22:52 +0000 (13:22 +0100)]
Import categories and states of FloraTerms (PlantGlossary)

5 years agocleanup some ERMS imports
Andreas Müller [Thu, 17 Jan 2019 12:40:17 +0000 (13:40 +0100)]
cleanup some ERMS imports

5 years agocleanup ERMS validators
Andreas Müller [Thu, 17 Jan 2019 12:35:47 +0000 (13:35 +0100)]
cleanup ERMS validators

5 years agoref #1444 further cleanup ERMS import
Andreas Müller [Wed, 9 Jan 2019 17:21:24 +0000 (18:21 +0100)]
ref #1444 further cleanup ERMS import

5 years agoref #1444 remove some files from ERMS import
Andreas Müller [Wed, 9 Jan 2019 17:16:54 +0000 (18:16 +0100)]
ref #1444 remove some files from ERMS import

5 years agofix compile after cleanup
Andreas Müller [Wed, 9 Jan 2019 13:42:14 +0000 (14:42 +0100)]
fix compile after cleanup

5 years agocleanup pesi merge code
Andreas Müller [Wed, 9 Jan 2019 11:14:27 +0000 (12:14 +0100)]
cleanup pesi merge code

5 years agoref #1444 cleanup erms import code
Andreas Müller [Wed, 9 Jan 2019 11:13:56 +0000 (12:13 +0100)]
ref #1444 cleanup erms import code

5 years agoref #1444 add new erms source
Andreas Müller [Wed, 9 Jan 2019 11:12:01 +0000 (12:12 +0100)]
ref #1444 add new erms source

5 years agoupdate version in pesi + eflora poms
Andreas Müller [Wed, 9 Jan 2019 09:53:56 +0000 (10:53 +0100)]
update version in pesi + eflora poms

5 years agominor typo
Andreas Müller [Tue, 8 Jan 2019 15:33:58 +0000 (16:33 +0100)]
minor typo

5 years agoAdd more source information to plant glossary import
Patrick Plitzner [Mon, 10 Dec 2018 08:12:06 +0000 (09:12 +0100)]
Add more source information to plant glossary import

5 years agoAdd more source information to plant glossary import
Patrick Plitzner [Mon, 10 Dec 2018 06:30:43 +0000 (07:30 +0100)]
Add more source information to plant glossary import

5 years agoE+M latest changes to taxon relations import
Andreas Müller [Fri, 7 Dec 2018 15:18:43 +0000 (16:18 +0100)]
E+M latest changes to taxon relations import

5 years agoHandle Willing, E as artist for media
Andreas Müller [Fri, 7 Dec 2018 15:18:02 +0000 (16:18 +0100)]
Handle Willing, E as artist for media

5 years agoE+M latest changes to name import (mostly for unparsed refdetail handling)
Andreas Müller [Fri, 7 Dec 2018 15:17:31 +0000 (16:17 +0100)]
E+M latest changes to name import (mostly for unparsed refdetail handling)

5 years agoE+M use uuids for Authors, Teams and references
Andreas Müller [Fri, 7 Dec 2018 15:16:57 +0000 (16:16 +0100)]
E+M use uuids for Authors, Teams and references

5 years agominor
Andreas Müller [Fri, 7 Dec 2018 15:16:22 +0000 (16:16 +0100)]
minor

5 years agoAdapt to coding convention
Patrick Plitzner [Fri, 7 Dec 2018 14:56:53 +0000 (15:56 +0100)]
Adapt to coding convention

5 years agoFix multiple vocabulary generation
Patrick Plitzner [Fri, 7 Dec 2018 14:13:41 +0000 (15:13 +0100)]
Fix multiple vocabulary generation

5 years agoFix db connection
Patrick Plitzner [Fri, 7 Dec 2018 14:01:31 +0000 (15:01 +0100)]
Fix db connection

5 years agoAdd plant glossary import
Patrick Plitzner [Fri, 7 Dec 2018 13:26:58 +0000 (14:26 +0100)]
Add plant glossary import

5 years agoAdapt palm import to new match strategy handling
Andreas Müller [Thu, 29 Nov 2018 12:40:33 +0000 (13:40 +0100)]
Adapt palm import to new match strategy handling

5 years agominor chanes to PhycobankHigherClassificationActivator
Andreas Müller [Thu, 29 Nov 2018 12:35:44 +0000 (13:35 +0100)]
minor chanes to PhycobankHigherClassificationActivator

5 years agominor changes to Greece image import Activator
Andreas Müller [Thu, 29 Nov 2018 12:34:21 +0000 (13:34 +0100)]
minor changes to Greece image import Activator

5 years agoref #7669 improve Willing import
Andreas Müller [Thu, 29 Nov 2018 12:33:52 +0000 (13:33 +0100)]
ref #7669 improve Willing import

5 years agoref #3979 implement CdmPreferences for E+M Activator and some other changes for Activator
Andreas Müller [Thu, 29 Nov 2018 12:30:39 +0000 (13:30 +0100)]
ref #3979 implement CdmPreferences for E+M Activator and some other changes for Activator

5 years agoref #7921 Caucasus area import for E+M
Andreas Müller [Thu, 29 Nov 2018 12:25:18 +0000 (13:25 +0100)]
ref #7921 Caucasus area import for E+M

5 years agoimprove reference import for E+M (edition and volume handling)
Andreas Müller [Thu, 8 Nov 2018 11:33:26 +0000 (12:33 +0100)]
improve reference import for E+M (edition and volume handling)

5 years agoref #7894 import source numbers for E+M
Andreas Müller [Thu, 8 Nov 2018 11:32:44 +0000 (12:32 +0100)]
ref #7894 import source numbers for E+M

5 years agoref #7420 latest changes to PhycobankActivator
Andreas Müller [Tue, 16 Oct 2018 15:45:45 +0000 (17:45 +0200)]
ref #7420  latest changes to PhycobankActivator

5 years agoref #7823 implement user.person deduplication
Andreas Müller [Sun, 14 Oct 2018 12:56:28 +0000 (14:56 +0200)]
ref #7823  implement user.person deduplication

5 years agoref #7799 deduplicate and parse authorteams
Andreas Müller [Sun, 14 Oct 2018 12:53:09 +0000 (14:53 +0200)]
ref #7799 deduplicate and parse authorteams

5 years agoref #7801 and ref #3787 deduplicate reference.authorstring and reference itself
Andreas Müller [Sun, 14 Oct 2018 12:52:09 +0000 (14:52 +0200)]
ref #7801 and ref #3787 deduplicate reference.authorstring and reference itself

5 years agoinclude filtered authors in E+M import
Andreas Müller [Fri, 12 Oct 2018 07:25:04 +0000 (09:25 +0200)]
include filtered authors in E+M import

5 years ago#7799 reduce duplicated sources
Andreas Müller [Fri, 12 Oct 2018 07:23:30 +0000 (09:23 +0200)]
#7799 reduce duplicated sources

5 years agoimprove performance for author loading in E+M
Andreas Müller [Fri, 12 Oct 2018 07:19:30 +0000 (09:19 +0200)]
improve performance for author loading in E+M

5 years agoref #7796 remove ILDIS Bibliographie NameFacts from E+M import
Andreas Müller [Fri, 12 Oct 2018 07:04:20 +0000 (09:04 +0200)]
ref #7796 remove ILDIS Bibliographie NameFacts from E+M import

5 years agocleanup
Andreas Müller [Wed, 10 Oct 2018 10:54:09 +0000 (12:54 +0200)]
cleanup

5 years agoref #7799 improve performance of authorteam loading
Andreas Müller [Wed, 10 Oct 2018 10:53:51 +0000 (12:53 +0200)]
ref #7799 improve performance of authorteam loading

5 years agoref #7799 and others reinstall null check
Andreas Müller [Wed, 10 Oct 2018 10:52:59 +0000 (12:52 +0200)]
ref #7799 and others reinstall null check

5 years agoadd euromed production to activator
Andreas Müller [Wed, 10 Oct 2018 10:52:10 +0000 (12:52 +0200)]
add euromed production to activator

5 years agoref #7798 implement and improve occurrence.nameUsedInSource import for freetext and...
Andreas Müller [Wed, 10 Oct 2018 10:51:21 +0000 (12:51 +0200)]
ref #7798 implement and improve occurrence.nameUsedInSource import for freetext and referenced names

5 years agosplit occurrence and occurrence source import
Andreas Müller [Wed, 10 Oct 2018 10:48:20 +0000 (12:48 +0200)]
split occurrence and occurrence source import

5 years agoref #7800 parse preliminary RefDetails (first start)
Andreas Müller [Wed, 10 Oct 2018 10:45:41 +0000 (12:45 +0200)]
ref #7800 parse preliminary RefDetails  (first start)

5 years agoref #7799 implement author parsing for AuthorTeam and Reference.RefAuthorString
Andreas Müller [Wed, 10 Oct 2018 10:38:45 +0000 (12:38 +0200)]
ref #7799 implement author parsing for AuthorTeam and Reference.RefAuthorString

5 years agocleanup
Andreas Müller [Wed, 10 Oct 2018 10:35:23 +0000 (12:35 +0200)]
cleanup

5 years agoref #7346 create areas only if vocabulary does not yet exist
Andreas Müller [Wed, 10 Oct 2018 10:16:51 +0000 (12:16 +0200)]
ref #7346  create areas only if vocabulary does not yet exist

5 years agoadd euromed production to destinations
Andreas Müller [Wed, 10 Oct 2018 08:32:21 +0000 (10:32 +0200)]
add euromed production to destinations

5 years agoref #2764 ref #4822 add WolrdDistCompl to query
Andreas Müller [Sat, 29 Sep 2018 16:19:33 +0000 (18:19 +0200)]
ref #2764 ref #4822 add WolrdDistCompl to query

5 years agoimprove commonName import validation
Andreas Müller [Sat, 29 Sep 2018 16:18:20 +0000 (18:18 +0200)]
improve commonName import validation

5 years agoref #7798 import freetext nameInSource for occurrences best way and log all problems
Andreas Müller [Sat, 29 Sep 2018 16:17:54 +0000 (18:17 +0200)]
ref #7798 import freetext nameInSource for occurrences best way and log all problems

5 years agorevert unwanted last commit partly
Andreas Müller [Sat, 29 Sep 2018 09:19:40 +0000 (11:19 +0200)]
revert unwanted last commit partly

5 years agoref #3986 remove It(I) and IT(S) from imported areas
Andreas Müller [Sat, 29 Sep 2018 09:16:50 +0000 (11:16 +0200)]
ref #3986 remove It(I) and IT(S) from imported areas

5 years agoAdd label to EM feature tree
Andreas Müller [Sat, 29 Sep 2018 09:16:05 +0000 (11:16 +0200)]
Add label to EM feature tree

5 years agocleanup
Andreas Müller [Sat, 29 Sep 2018 09:13:33 +0000 (11:13 +0200)]
cleanup

5 years agolatest state for EuroMedActivator
Andreas Müller [Fri, 28 Sep 2018 13:19:35 +0000 (15:19 +0200)]
latest state for EuroMedActivator

5 years agoref #2764 ref #4822 distinguish EM and other areas status handling and use specific...
Andreas Müller [Fri, 28 Sep 2018 13:19:18 +0000 (15:19 +0200)]
ref #2764 ref #4822  distinguish EM and other areas status handling and use specific endemism status and annotation types

5 years agoref #7420 updates to phycobank import according to requirements
Andreas Müller [Thu, 27 Sep 2018 13:27:17 +0000 (15:27 +0200)]
ref #7420 updates to phycobank import according to requirements

5 years agocleanup
Andreas Müller [Tue, 25 Sep 2018 11:35:21 +0000 (13:35 +0200)]
cleanup

5 years agoref #3986 , ref #7346 remove some areas from area import
Andreas Müller [Tue, 25 Sep 2018 11:34:42 +0000 (13:34 +0200)]
ref #3986 , ref #7346 remove some areas from area import

5 years agocleanup
Andreas Müller [Tue, 25 Sep 2018 09:11:35 +0000 (11:11 +0200)]
cleanup

5 years agoref #7346 use E+M area vocabulary for common names
Andreas Müller [Mon, 24 Sep 2018 19:25:37 +0000 (21:25 +0200)]
ref #7346 use E+M area vocabulary for common names

5 years agoref #7440 add common name marker to common name references
Andreas Müller [Sat, 22 Sep 2018 12:20:15 +0000 (14:20 +0200)]
ref #7440 add common name marker to common name references

5 years agocleanup
Andreas Müller [Sat, 22 Sep 2018 12:18:13 +0000 (14:18 +0200)]
cleanup

5 years agofix #7769 implement postulated parental species as extension
Andreas Müller [Tue, 18 Sep 2018 14:22:31 +0000 (16:22 +0200)]
fix #7769 implement postulated parental species as extension

5 years agoref #3992 fix sec/last scrutiny for MANs
Andreas Müller [Tue, 18 Sep 2018 14:20:59 +0000 (16:20 +0200)]
ref #3992  fix sec/last scrutiny for MANs

5 years agocleanup and improve BM validators
Andreas Müller [Tue, 18 Sep 2018 14:14:37 +0000 (16:14 +0200)]
cleanup and improve BM validators

5 years agocleanup
Andreas Müller [Tue, 18 Sep 2018 14:13:59 +0000 (16:13 +0200)]
cleanup

5 years agoremove Cyprus user import
Andreas Müller [Tue, 11 Sep 2018 20:27:23 +0000 (22:27 +0200)]
remove Cyprus user import

5 years agolatest changes to EuroMedActivator (including changes in TaxonRelation ID selection)
Andreas Müller [Sun, 9 Sep 2018 20:15:31 +0000 (22:15 +0200)]
latest changes to EuroMedActivator (including changes in TaxonRelation ID selection)

5 years agofix Berlin Model Occurrence and TaxonRelation import validators
Andreas Müller [Sun, 9 Sep 2018 20:14:34 +0000 (22:14 +0200)]
fix Berlin Model Occurrence and TaxonRelation import validators

5 years agocleanup
Andreas Müller [Sun, 9 Sep 2018 20:12:52 +0000 (22:12 +0200)]
cleanup

5 years agoref #3992 remove logging of last scrutiny taxa with no standard PTRefFk
Andreas Müller [Sun, 9 Sep 2018 20:12:06 +0000 (22:12 +0200)]
ref #3992 remove logging of last scrutiny taxa with no standard PTRefFk