app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/AlgaTerraActivator.java

   1 /**
   2 * Copyright (C) 2007 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.app.berlinModelImport;
  11
  12 import java.util.UUID;
  13
  14 import org.apache.log4j.Logger;
  15
  16 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  17 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  18 import eu.etaxonomy.cdm.database.ICdmDataSource;
  19 import eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportConfigurator;
  20 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  21 import eu.etaxonomy.cdm.io.common.Source;
  22 import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
  23 import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES;
  24 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
  25
  26
  27 /**
  28  * TODO add the following to a wiki page:
  29  * HINT: If you are about to import into a mysql data base running under windows and if you wish to dump and restore the resulting data bas under another operation systen
  30  * you must set the mysql system variable lower_case_table_names = 0 in order to create data base with table compatible names.
  31  *
  32  *
  33  * @author a.mueller
  34  *
  35  */
  36 public class AlgaTerraActivator {
  37         private static final Logger logger = Logger.getLogger(AlgaTerraActivator.class);
  38
  39         //database validation status (create, update, validate ...)
  40         static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;
  41         static final Source berlinModelSource = BerlinModelSources.AlgaTerra();
  42 //      static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
  43         static final ICdmDataSource cdmDestination = CdmDestinations.cdm_algaterra_preview();
  44
  45         static final UUID treeUuid = UUID.fromString("1f617402-78dc-4bf1-ac77-d260600a8879");
  46         static final int sourceSecId = 7331;
  47
  48         static final UUID featureTreeUuid = UUID.fromString("a970168a-36fd-4c7c-931e-87214a965c14");
  49         static final Object[] featureKeyList = new Integer[]{7,201,202,203,204,205,206,207};
  50
  51         //check - import
  52         static final CHECK check = CHECK.CHECK_AND_IMPORT;
  53
  54
  55         //NomeclaturalCode
  56         static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICBN;
  57
  58 // ****************** ALL *****************************************
  59
  60         //authors
  61         static final boolean doAuthors = true;
  62         //references
  63         static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;
  64         //names
  65         static final boolean doTaxonNames = true;
  66         static final boolean doRelNames = true;
  67         static final boolean doNameStatus = true;
  68         static final boolean doTypes = false;
  69         static final boolean doNameFacts = false;
  70
  71         //taxa
  72         static final boolean doTaxa = true;
  73         static final boolean doRelTaxa = true;
  74         static final boolean doFacts = true;
  75         static final boolean doOccurences = false;
  76         static final boolean doCommonNames = false;
  77
  78 // ************************ NONE **************************************** //
  79
  80 //      //authors
  81 //      static final boolean doAuthors = false;
  82 //      //references
  83 //      static final DO_REFERENCES doReferences =  DO_REFERENCES.NONE;
  84 //      //names
  85 //      static final boolean doTaxonNames = true;
  86 //      static final boolean doRelNames = false;
  87 //      static final boolean doNameStatus = false;
  88 //      static final boolean doTypes = false;
  89 //      static final boolean doNameFacts = false;
  90 //
  91 //      //taxa
  92 //      static final boolean doTaxa = false;
  93 //      static final boolean doRelTaxa = false;
  94 //      static final boolean doFacts = true;
  95 //      static final boolean doOccurences = false;
  96
  97
  98
  99         /**
 100          * @param args
 101          */
 102         public static void main(String[] args) {
 103                 System.out.println("Start import from BerlinModel("+ berlinModelSource.getDatabase() + ") ...");
 104                 logger.debug("Start");
 105                 //make BerlinModel Source
 106                 Source source = berlinModelSource;
 107                 ICdmDataSource destination = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmDestination;
 108
 109                 BerlinModelImportConfigurator bmImportConfigurator = BerlinModelImportConfigurator.NewInstance(source,  destination);
 110
 111                 bmImportConfigurator.setClassificationUuid(treeUuid);
 112                 bmImportConfigurator.setSourceSecId(sourceSecId);
 113                 bmImportConfigurator.setNomenclaturalCode(nomenclaturalCode);
 114
 115                 bmImportConfigurator.setDoAuthors(doAuthors);
 116                 bmImportConfigurator.setDoReferences(doReferences);
 117                 bmImportConfigurator.setDoTaxonNames(doTaxonNames);
 118                 bmImportConfigurator.setDoRelNames(doRelNames);
 119                 bmImportConfigurator.setDoNameStatus(doNameStatus);
 120                 bmImportConfigurator.setDoTypes(doTypes);
 121                 bmImportConfigurator.setDoNameFacts(doNameFacts);
 122
 123                 bmImportConfigurator.setDoTaxa(doTaxa);
 124                 bmImportConfigurator.setDoRelTaxa(doRelTaxa);
 125                 bmImportConfigurator.setDoFacts(doFacts);
 126                 bmImportConfigurator.setDoOccurrence(doOccurences);
 127                 bmImportConfigurator.setDoCommonNames(doCommonNames);
 128
 129                 bmImportConfigurator.setDbSchemaValidation(hbm2dll);
 130
 131                 bmImportConfigurator.setCheck(check);
 132
 133                 // invoke import
 134                 CdmDefaultImport<BerlinModelImportConfigurator> bmImport = new CdmDefaultImport<BerlinModelImportConfigurator>();
 135                 bmImport.invoke(bmImportConfigurator);
 136
 137
 138                 System.out.println("End import from BerlinModel ("+ source.getDatabase() + ")...");
 139         }
 140
 141 }